Hippoglossus stenolepis (Pacific halibut): 118120954
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Entry
118120954 CDS
T08308
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X4
KO
K09291
nucleoprotein TPR
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118120954 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118120954 (tprb)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118120954 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
118120954
NCBI-ProteinID:
XP_035032393
LinkDB
All DBs
Position
14:7788343..7808311
Genome browser
AA seq
2374 aa
AA seq
DB search
MAALLLQELGDSEICKIPKPVQNKLERILSDQQYEIDSLKAQQEQFRVDNEQHFFEKVKQ
LAQCQEEFRSQTQDHLKLKDVFTKLEEDLKTVREKNSEYETVQEKLSSEQTLLSKAKEEL
EAEKRDLVRTLERRSLEVEHVNDDLRQLNDKLVEVNTSKMALQMKLDELEAAEVNIKYKE
KRMEQEKELLHGQTSWLNEELKAKSEELLSLSRQKGNKILDLKCSLENKEDELNRLQDQM
VSLKTSNENLQRQSEDMISKLKDAKEQQANMEEKFRNELNANIKLSNLYKGAAADAEAKS
EELSLAVEELHKLLKEAGEANKVLEEKLQESNGATDKTVAELNERIQSLEKELDNANDLL
SSSKLRGPLGTSSVLTEEQMTTMSPTAATVSKIKPGVKLTELYTAYVESQEQLQLERLEN
KRVNKYLDDIVQEVEAKGPILKRQRDEHERMQKSVASLSAKLEQAFKEVHRLQREADEAN
KHSSVLERDNQRCELQLSDMAQQVRVLLIELEEARGNHIVLEEDVSSADISSTSEVISQH
LVTFRGVEELQKQNQRLLVALRELSEAQEKEEFEGTVSRHGELEQSLGKAQVELESLKEQ
RSQHNKMTESIVRQRDMYRVLLAQATGVSFPQQDALPDDFSLTSTPRRSPAATPTTGTPT
ALVSMATESTEALEAKAALRQLQEVFTTYKKERLEGDKVSTVQSEKFQEQLSDLRSQNAK
ISTQLEFASKRYEMLQDNVEGYRKEIASLREKEQKMIAATQKQEQTIHTLNEDLRAAKEK
LSMAEGCAEGLRKERDLLKLVESRLMQEKESIQSQQQSQNMLLTNLQTIQATLERSETDT
RQRLNNQLEKQEREISQLQKRLENEVEQRHLLSRNQEIQLMETKRQVETQVALYQKTKEL
LSAAELELNSLRLQQGSSEAHHTLSCPSTPTTRGLQVSDQDREHLQGRLRLAETRVEELA
ESLKAVTSSMEQYRAMAQSLEESLDKEKKVTEQARSSIEAHMKEAEIQHRKIEEKLLEAE
KEKQGLEEQKKIALASLEEQINNLRRGLCNAQASQQAALQQVALAEAQQQKAVQDSQEHA
KLAAEAQDKYEREMMLHAADVETLQAAKAQARQAVELKHQLEEKVQRVNTELLEARISWE
EQEKILMEEMTKIESRFEELQRQNVLLHEQIQTMSSKMAESLQRAASESTTNIYLSEEGK
SQDQVLEILRFVRREKEIAESRYEVAQGETLRHRLRVAHLERELKEMQDSLSAARERMQV
TAKTLAQHDELMTKTETMSILMETNKMLRGEKENMEQELQQTQAKLQKLESDLMPMQQAN
SELSEKSGMLQAEKKILEEEIKRWKARTQHLVSQQKDSDPEEYKRLHSEKEAHLKRIQQL
SEETNRLKADVSRSSNLTTTLQGQIQNLRDSMSKITDERNSLKKEVEIKNQEILDKVRTI
TQVKKIGRRYKTQYDELKVDHDKMVAEAAAGPSQEEEARQASVQELQSLRDSLNQAEAKT
KELEGQLENINKVVTERETEVRNTQEQSSRLQTELTRLRQDLQDKSSQEDTLRQQMTNKE
EKTRKALVYARQRINQLTSSKDALQKENDELKQQREELEVRVSALKSQYEGRLSRQEREL
RDLRGQQERQEQRDEPPEAGPSKTQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIK
PTPVVATAGKQPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAIQSTEG
PPVEHVTVYGSASGSVRSSSPNVQASLASPMLTVQQTQTQTTAFVQPTQQQSVSHAEPAN
QEPPPLVIEATPSSQVEWPSTSSTSMFATVSGTSSMSKRPREEEESSSMVTDTEAPPEDT
SRAPIPKKLRIIQRVGPEEEVLAEDSAEAEGVVPTDSQDSAEASQTEEFQALEEGEDSAA
SQSMTLDQEMTLTQSDAPEQLSQEVIVIITDTESEEEQEEEDEEEDEQECDEEEEEEDED
EEEEEEEDEEEDEGGMGEEGEESNEGSGDGNEAYEEDDTEGADVTDPGTETEESLGAFDS
TQRPADSQTPCFESSAMEMFSSDQPITSSGSRMPQSPRRPTQQLQTRPNIHPAPSSELGQ
RMPARRQTVGRVPQLTPGLPQHFFDDDDRMVPNAPTLVVPHRDGFDQAVHSPQVAGVPRF
RFGPSDDMPQTSSSSHSDLGQLASQGGLGIYESPLFLTTHEEESGGRSVPTTPLQVTAPV
TIFSEAAQSDSSEHASQSVPMVSTSTPGLLVPGAAGTGEDRDDVFLEPDTDRPSAEASSD
QVVSQGDMEEQSQLSDKASLPSTSQEPSSSSADTSSVPPKPSRPGTSRQLQRWPESRGGR
MKRGGGFHTDFYNNTDLYCQAFPSRGIHGRRFAR
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgttgctgcaggagctgggcgactcggagatttgtaaaatacccaaaccc
gttcagaacaagctcgagaggattctgtccgatcagcaatacgagatcgactctctgaaa
gcgcagcaggagcagtttcgagtcgacaacgagcaacatttctttgaaaaagtgaagcag
cttgcccagtgtcaggaggagtttcggtcccagactcaagaccatcttaaactcaaagat
gtgtttactaagcttgaggaggatctcaaaactgtgcgtgagaagaacagtgaatatgag
actgtccaagagaagctgtcgtccgagcagactctgctgtcaaaagccaaagaggaactt
gaggcagaaaagcgagatcttgtgcgaactctggaaaggaggtcgttggaagtggagcat
gtaaatgatgacttgaggcagctcaatgataagctggtggaagtcaacacctctaagatg
gccttgcagatgaagctagatgagctcgaagctgccgaagtcaacattaaatacaaggaa
aagcgaatggaacaagagaaggagcttctgcatggtcagacatcttggctgaatgaggag
ttgaaggcaaagagtgaggagcttctgtctctctccagacagaagggaaacaagatcctg
gacttgaaatgctccctggagaacaaagaagatgagttgaaccgcctccaagaccaaatg
gttagtttgaagacttcaaatgaaaatcttcagagacagagtgaggacatgatcagcaaa
ctgaaagacgccaaggaacaacaagccaacatggaggaaaagttcagaaatgagttgaat
gccaacattaagctctccaatttatataagggtgcagctgcagatgctgaggcaaaaagt
gaagagttgagtctggctgtggaggagctacataaactgttaaaggaggctggagaagcc
aacaaggtccttgaggagaagttacaggagagtaatggtgccacagacaagactgtcgct
gaactaaatgagaggatccagagtctagagaaagagctggataacgccaatgatctgctg
tcgagctctaaacttagaggcccacttggaacatcatctgtgctgacagaagagcaaatg
acaacaatgtctccaacagctgctactgtgtccaagatcaaacctggtgtgaagctcact
gagttgtatactgcctatgtggagagccaggagcagctgcagttggagcgcctggagaac
aaacgagtcaacaagtacctggatgacatagtgcaggaagtggaggcaaaaggccccatt
cttaaacggcaacgtgatgagcatgagcgcatgcagaagtcagtggccagtctttctgcc
aagctggagcaggctttcaaggaggtgcaccgcctgcagagggaggctgatgaggccaac
aagcattcctcagtcttagaacgggacaatcagagatgtgaactgcagctgtccgatatg
gctcagcaggtacgagtgctgctcatcgagcttgaagaggctcgtggaaaccatattgtt
ctcgaggaggatgtgagctcagccgacatcagcagcacatcggaggtgatcagccaacat
ctggtgaccttccgcggtgtggaggagcttcagaagcaaaaccaacgtctcctggtggcc
ctcagggagctcagtgaggcccaagagaaagaggagtttgagggcactgtcagcagacat
ggtgagctggagcagagtttggggaaggctcaggtggagctggagtccctgaaggagcag
cgcagtcagcacaataaaatgaccgagtccatcgtgaggcagagggacatgtaccgtgtg
ctgctggctcaggcaaccggagtgagctttcctcagcaagatgcactacccgatgacttc
tccctgacctccacgcctcgacgctcacctgcagccactcccaccacaggaacgcccact
gctcttgtctccatggcaacagagtctactgaagctctggaggccaaggctgccttgcga
cagttgcaggaggtgtttaccacttataaaaaggagcgtttggagggtgacaaggtgtcg
actgtgcagagcgagaagttccaagagcagctctctgacctccgctcccagaatgccaaa
atatccacccagttggagtttgcctccaaaaggtatgagatgcttcaggacaacgttgag
ggctacaggaaggagattgcctccctaagagagaaagaacagaagatgattgctgctaca
cagaagcaggagcaaactatccacactttgaatgaggatctgagagctgccaaagagaaa
ctctccatggcggagggctgcgctgagggcctgcgtaaggagagagacttgctgaagttg
gtggagtccagattgatgcaggagaaagaatcaatccagagtcaacaacagagccagaac
atgctgctgaccaacctccagacaattcaggcgactcttgagcgttcagagaccgacaca
cgccagcgtcttaacaaccaattggagaagcaggaacgggagatctcccagctgcagaag
cggctggagaacgaggtggaacagcgccacctgctcagcagaaaccaagaaatccagtta
atggagacaaagaggcaagtggagacgcaggtggctttataccagaagaccaaagagctg
ctgagtgctgctgagttggagctcaactccctccggctgcagcaaggcagcagcgaagca
catcataccctgagttgcccctccacacccaccaccagaggcctgcaggtatcagatcaa
gacagagagcaccttcagggccgcctgaggttggctgagacccgcgtagaggagctggca
gagagcctgaaggcagtaacctccagcatggagcagtacagagccatggctcagagcctg
gaggagtccctggataaagagaagaaggtaacggagcaggcacgctcatccattgaagcc
catatgaaggaggctgagattcagcaccgaaagattgaggagaagcttctggaagcagag
aaagagaagcaaggcctagaagagcagaagaagatagctctagcttcactggaggaacag
ataaacaatctaaggagaggtttatgcaacgctcaggcatctcaacaggcggcactacag
caggtagcactggctgaggctcagcagcagaaagcggttcaggacagccaggagcatgct
aagctggcagcagaagcacaggataaatatgagcgggagatgatgctgcatgcagcagat
gtggagactctgcaggctgcaaaggctcaggcgcggcaggccgtcgagctcaaacaccag
ttggaagagaaagtacagagggtcaacactgagctcctggaggccagaatctcctgggag
gagcaggaaaagatcctcatggaggaaatgaccaagattgagagtcgctttgaggaattg
cagagacagaatgttctcctgcatgagcagatccagacaatgagcagcaagatggccgaa
agcttgcagcgtgccgccagcgagagtactacgaacatttacctgagtgaagagggcaaa
tctcaagaccaagtgcttgagattctcaggtttgtgcgtcgggagaaggagatagcagaa
tcccgttatgaggttgcccaaggtgagactttgcgtcatcggctgagggtggcgcacctg
gaacgagagctgaaggagatgcaggacagcttgagtgctgcaagggagaggatgcaggtg
acagcaaagactctggctcagcacgacgagctgatgaccaagacagaaactatgagcatc
ctgatggagaccaacaagatgctgagaggggaaaaggaaaatatggagcaggagctgcag
caaacccaagctaagttgcagaagctggagtcagacctcatgccaatgcagcaggccaac
tctgagctgagtgagaagagcggcatgctgcaggcggagaagaagatcctggaagaggag
atcaagcgctggaaagctcgaacgcagcatttggtgagtcaacagaaagattcagaccca
gaggagtacaagcgtctgcactctgagaaggaggcacatctcaaacgcatccagcagctc
tctgaggagacgaacagacttaaagcagatgtgtccaggagcagtaacttaacaactacc
ctacaaggccagatacagaacttgcgtgacagtatgagtaagataactgatgagcgaaat
tcactgaagaaggaagtggaaatcaagaaccaggaaatcctggacaaggttcgaactatc
acgcaggtcaagaagatcgggcgtcgctacaagactcaatatgatgaactcaaggtggat
catgacaagatggtggctgaggccgcagcaggtccctcccaagaagaagaggctcgtcag
gcgtcagttcaggaactccagagcctcagagattctctaaaccaggctgaagccaagacc
aaagagctggaaggacagctggagaacataaacaaggtggtcacagagcgggagactgaa
gtgcgtaacacccaggaacagtcctccaggctgcagacagagctgaccaggctgaggcag
gatttgcaggataagtcttcacaggaggacacactgaggcagcagatgaccaacaaagag
gagaagacccgaaaggctcttgtttatgccagacagaggatcaaccagctcactagctcc
aaagacgcgctgcagaaggaaaatgatgagctaaagcagcagcgtgaggagctggaggtt
cgagtgagcgctctcaagtcccaatacgagggccgcctgagtcggcaggagagagaactg
agagacctgcgaggtcaacaggagcgacaagagcaaagagatgagccacctgaggcaggt
cctagcaagacccaggagcagcagaggagcacagaacagaggcagatcagtctgaagaca
actccagctgcagacaggggcagtgccagcacctccgaacctccaactgccaacattaag
ccaacgcctgtagtcgcaacagccggcaagcagccggtcaacccggggaacaaacccact
ccaagagcaagcatccggcctatgatcactccagcgactgtacccacaccaacgcccaca
gctacagtcatgcccaccactcaggtggagacccaggaagccattcagtctactgaaggc
ccaccagtggagcatgtgaccgtgtatggcagcgccagtggctctgtgcgctcgtccagc
cccaatgtccaggcctctttagccagccccatgttgaccgttcagcagacccagacacag
acgacggcatttgttcaaccaacgcagcaacagagcgtgagccatgcagagccagccaat
caggagccaccacctctggtcattgaggccacacccagttcacaggtggaatggccttcg
acttcctccacctctatgtttgccactgtttcaggaacttcctccatgtccaagaggcct
cgagaggaggaggaaagcagcagcatggtcactgacacagaagcccccccggaggacacc
tccagggctcctatacccaagaagctacgcatcatccagagagtgggtccagaggaggag
gtgctggctgaggacagtgctgaggctgagggcgtcgtgccaacagacagtcaagacagt
gcagaggcaagtcagacggaggagtttcaagcactggaggaaggagaggacagtgccgcc
tcacagtccatgactttggaccaagagatgacgctgacgcagagtgacgcccccgaacaa
ctgtcacaggaagttatcgtcataataacagacactgagagtgaggaggagcaggaagag
gaggatgaggaggaagacgagcaggaatgcgatgaggaggaagaggaggaagatgaagac
gaggaggaagaagaggaagaggatgaagaggaagatgagggagggatgggggaggaagga
gaggaaagcaatgaggggagcggagatggcaacgaggcctatgaagaagatgacacagag
ggagctgacgtcacagacccgggcacggagactgaggagagtttgggggcgtttgactcc
acccagagaccagcggattcccagacaccctgcttcgaaagcagcgcgatggagatgttt
tcctccgatcaacctatcacaagctctggttcacgcatgccccagtcgccacggagacca
acgcaacagctgcaaacccgcccgaacatccaccctgccccatcatcagaactgggacag
cgcatgcctgctcgtcgtcagacagtgggcagagtccctcagctcactcccgggctgccg
cagcacttcttcgacgacgacgacaggatggttcccaacgctcccactctggtggtgccg
caccgcgacgggttcgaccaggccgtccattctccgcaggtggccggtgtgcctcgcttt
cggttcggcccttcggacgacatgccccagaccagctcgtcttcacactctgatctggga
caactggcatcacaaggaggtcttgggatatatgaaagccccttgttcctcacaactcat
gaagaagagtctggtggacgcagtgttcctaccaccccactgcaagttacagccccagta
accatcttctcagaggcggctcagtctgacagcagtgagcacgcctcgcagtcggttccc
atggtgagcacgtccacgccaggcctgctggtgccaggagcagccggcacaggggaggac
agagatgatgtcttcctggagcctgacactgataggcccagtgctgaagcgtcgtcggat
caggtcgtgtctcagggagacatggaggagcaaagtcagctgtctgacaaggccagcctc
ccctccaccagccaggagccctcctccagctccgcagatacaagcagcgtgccgcctaaa
ccctccagacctggaacgagcagacagctgcagcgctggccggagagccgcggcggccgg
atgaagagaggaggaggcttccacacagacttttacaacaacactgatctttattgtcag
gcgtttccttctcggggaatacacgggagacgattcgccagatga
DBGET
integrated database retrieval system
