Hippoglossus stenolepis (Pacific halibut): 118120957
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Entry
118120957 CDS
T08308
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03420
Nucleotide excision repair
hsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118120957 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
118120957 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hsp03051
]
118120957 (rad23ab)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118120957 (rad23ab)
Proteasome [BR:
hsp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118120957 (rad23ab)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118120957 (rad23ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
UBA_2
Dsc3_N
Crinkler
DUF1421
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
118120957
NCBI-ProteinID:
XP_035032397
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Position
14:complement(27386517..27397289)
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AA seq
470 aa
AA seq
DB search
MLTITLKTLQQQTFKIEIEAEVTVKTLKVKIEEDRGKDAFPAAGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKPNLPPQKAPQPTSQPAAASAPPSTSAPASGPAQAPSTPTHT
VSVPTPAPQAVPPPESPSSSPVPENTESTPAEASAALDSNVTPDLAPDLAPAVTPASALA
SASETDQTALATADPTTPATQLEDNPRENPENEPSITAPMRSSASSLVDELGLLEEAASI
LVTGPAYENLVSEIMSMGYEREQVVNALRASYNNPDRAVEYLLMGIPAEASDLPPQEPVR
HSAPNPPNPATEAPQQPPATSNTGPVSSSQPPPAGGGSVATANPLEFLRNQPQFQQMRQI
IQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPRGGDTGDEGAEAQGSPQTNY
IQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQTWDDE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataacactgaagaccctccagcagcagacgttcaagatagagatagaggca
gaggtgacggtgaaaactctgaaggtgaaaatagaggaggacagagggaaagatgcattt
cctgctgcaggacagaaactcatctatgcaggcaaaatcttgaatgatgacatcccgttg
aaagagtacaaaatcgatgagaaaaactttgtggtggtcatggttaccaagcctaaacca
aaccttcctccacaaaaagctcctcagccaacttctcaaccagctgcagcctcagcaccg
ccctcaacctcagcaccggcctctggtcctgcacaagcaccctccacaccgacacacaca
gtgtctgtgcccacacctgccccacaggcagtgcctcctcctgaatccccatcttcatcc
ccagtcccagaaaacacagaatcgactcctgctgaagcatcagcagctctggactcaaat
gtaaccccagacttagctcctgacttggctccagctgtcactccagcctctgccctggct
tcagcctctgaaacggatcaaacagccttggccactgcagaccccaccactcctgctacg
cagctagaagacaatccaagggaaaaccctgagaatgaaccatccatcacggcaccaatg
cgctcttcggcttcaagccttgttgatgaactgggactccttgaagaagcagcatcaata
ctggtgacaggtccggcctatgagaacctggtgtcagagatcatgtctatgggttatgag
cgggagcaggtagttaatgcactcagagccagttacaacaacccagacagagcagtggag
tacctactgatgggtattccagcagaggccagtgatctgccacctcaagagccagttaga
cacagtgctccaaaccccccaaaccctgccacagaggcaccgcagcaacccccagcaacc
tctaacacagggccagtgtctagcagtcagcctccccctgctggtggaggttctgtcgcc
acggcaaaccctctggagttcctaaggaatcaaccacagttccagcagatgagacagatc
atccagcagaacccagctctcttgccagccctgctgcagcagctgggcagagacaaccca
cagctgctgcagcaaatcacacagcaccaggagcgttttgtacagatgctgaatgagcct
cgaggcggagacacgggagacgagggcgccgaggcccaggggtctccacagacaaactac
atccaggtcaccccacaggagaaggaggccattgagaggttaaaagcgctgggcttccct
gaaggcttagtcatccaggcgtacttcgcatgtgagaagaatgagaatctggctgctaac
tttctgctccagcaaacgtgggacgatgagtaa
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