Hippoglossus stenolepis (Pacific halibut): 118120994
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Entry
118120994 CDS
T08308
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04217
Necroptosis
hsp04622
RIG-I-like receptor signaling pathway
hsp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118120994 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118120994 (cyldl)
04625 C-type lectin receptor signaling pathway
118120994 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118120994 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118120994 (cyldl)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118120994 (cyldl)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C67
118120994 (cyldl)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118120994 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118120994
NCBI-ProteinID:
XP_035032465
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All DBs
Position
14:2245660..2253861
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AA seq
764 aa
AA seq
DB search
MTSPANHYFIITEKPEYYSHINPGDICYISEHSYKRHSSSSKLPVFLFSRSSCLDYDIDR
KYLSALPVKSAELLLALPDDAERLKWFREGAALPTALGLTLGTAVIVQAGEEELRGSIRY
IGRLTKSKNPLSATFFGIELQGADRGQGDTDGSHQRETLFSCAKDCGVFVPFSRVRPLVP
SSLSPSGPEPQPRTEELSSGDRVTYYTSNKTGHGMVVDVLETKGNHFVRISTDMDENGKT
GGEVKVPLDCVMKGEVPAEAEGMDVDAPLVEQNKDDLYLSLTVNSVVEVTLAKGNSYGII
RWIGLLTDKQQIMAGLELEEDRGVSDGTFKNKRHFTCPPKRALFVKLISCRPDSRFQSNS
ANRSKKMLKQDDTESVGELELSSVKLETVPPISTEQVNEILIGQMKGIQGHCNSCYMDAA
LFSLFSCSSVLDSMLFKSTAPQDAPIQKTLLRDIVNPLRSKGFVEGQHIMKLRQQLQKHG
YSGSFTTDEKDPEEFLIVIMHNILSLEPLLKLSAGGEVQESYCYQIFLDQNHSLVLPTVQ
QLLEHSFHSAGLKLAEVPSCLILQMPRFGKKFKMFEKIIPSLELDITDLLSEGSLQCMLC
GTVAEVQCTDCFKDPVFSQTGFKVFCRTCSSQVHCHPQRQSHQPSLLDIPKGYLGRLPPQ
ALARDKLELFAVLCIETSHYVSFIKHGPHSEDWIFFDSMADREGETDGYNIPEVRACPEV
GTYLEMSPTELARQVPRDMKGVAKRLFCDAYMYLYQSTSMCIYR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaccagccaaccattactttatcataacagaaaaacctgaatattactcacac
atcaatcctggcgacatatgttacatctctgaacacagttacaaaagacatagctcttct
tctaagttgccggtcttcctcttcagtagatcttcgtgcttagattatgacatagacagg
aaatacttgtcggctctgccggtgaagagtgccgagctgctgctggccctgccggatgat
gccgagcggctgaagtggttcagggagggagctgctctcccaacagcactcggactcacg
ttgggcactgcagtgatcgtgcaggcaggagaagaggagctgaggggcagcatccgctac
atcggaagactcacaaaatctaaaaatcctttatcagcaactttctttgggattgaacta
cagggagcagacagagggcaaggcgacaccgatgggtcccaccagcgtgaaaccttgttc
tcatgtgcaaaagattgtggcgtttttgtcccgttctccagagtcagacctttggtcccc
agctccctgtcgccctccggccctgagccacagccccggacagaggagctgtcctcaggg
gacagagtcacgtactacaccagtaataaaactggtcatgggatggtggtggacgtgctg
gaaacgaagggaaaccattttgttcggatctccacagacatggatgaaaatgggaagacg
ggaggagaagtgaaagttccactggattgtgtgatgaagggagaggtccctgcagaggca
gaggggatggacgtcgacgcgccgctggttgaacagaacaaggatgatctgtacctgagt
ctgactgtgaactctgtggtggaggtgacgctggctaaaggaaattcatacggaatcatc
cgctggatcggccttttgactgataaacagcaaatcatggccggactggagctggaggaa
gacagaggagtgagtgatggcacctttaagaacaagcgtcacttcacgtgtcctcccaag
agggcgctgttcgtgaagctgatctcctgccgtcccgactcgcgcttccagagcaattca
gccaatcgcagcaagaagatgctaaaacaggatgacacagagagcgttggcgagttggag
ctcagttcagtgaagctggagacggttcctccaatcagcactgagcaggtgaacgagatt
ctgattggacaaatgaaagggatccaaggccactgcaactcctgctacatggacgctgcc
ctcttcagtctgttctcctgctcctctgtgctggactcaatgttgtttaaatcaactgca
cctcaggacgcccccattcagaaaacactgctccgggacatcgtcaacccgctccgcagt
aagggcttcgtggaagggcagcacatcatgaagctccggcagcagctgcagaaacacggc
tacagtggctccttcaccacggatgagaaggatccagaggagttcctcatcgtcatcatg
cacaatattctctccctggagcctctactcaaactctcggcgggcggtgaagtgcaggag
agttactgttatcagatctttctggaccagaaccacagcctggtgctgccgacagttcag
cagctgctggaacattccttccacagcgcaggactcaaactggccgaggttccgtcctgc
ctcatcctccagatgcctcgatttggaaagaaattcaagatgtttgaaaaaatcattccc
tctctggagctggacatcactgacctgctctctgaaggttctctgcagtgcatgctatgt
ggaaccgtggctgaggttcagtgcaccgactgttttaaagatcctgttttcagtcagacg
ggatttaaagttttctgcaggacgtgctcgtctcaggtgcactgtcatcctcagcggcag
tcccatcagccgtcgcttctggacatccccaaaggttacctgggtcgcctgccccctcag
gctctggccagagacaagctggagctgttcgccgtgctctgcatcgagaccagccactac
gtgtccttcatcaaacacgggccacactccgaggactggatcttcttcgacagcatggcg
gacagagaaggagagacagacggctacaacatccccgaggtgcgcgcctgcccggaggtc
ggcacttacctggaaatgtctccgaccgagctcgccaggcaggtgcctcgagacatgaag
ggcgtggccaagcgtctgttctgtgacgcctacatgtacctgtaccagagcaccagcatg
tgcatctatcgctga
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