Hippoglossus stenolepis (Pacific halibut): 118121035
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Entry
118121035 CDS
T08308
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118121035 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118121035 (rexo1)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-60S particles
RNases
118121035 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
ChaC
Motif
Other DBs
NCBI-GeneID:
118121035
NCBI-ProteinID:
XP_035032536
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All DBs
Position
14:8051931..8063228
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AA seq
1265 aa
AA seq
DB search
MLRSTGFFRGIDCPFYAESGDAGGGRNGCNRAYCHFRHSQQRRPSYGAPPADVKKHREPL
SAQKEQGYDPFNPEVVRPQEQQNGKPAESGDFSGALEQVNRAIEEARSEVEWEKRKLSRI
GDEPYNPSGSTSLSSSRATKSKAAASHMAYDPGSYQITSVGYNPSPSCSKYTLDSDNQGS
NSNSMEYVPTLKKPPTRTKTYKLPSPPSSPKYSISAVASKCKYTLDNSKPSTDMEYDPLS
NYTAGIAAKSKRAEAARAVKTHGSKTHKLPVRDLSDEEYVVAVKKTQQPSVDMSKYTFSD
SEEESSGTEYRPTSLRNLQQRKGNTGTAGVAFAKEKKERTESVINALTQRNKEDSAQDSD
VQVDIKRKGNPEKNKLVSRISHEKSGKSEKIHKFEKEAKKTLSSKSGSSSRNDKGSIKHS
NQESAKKENKSLGKKDDSKNTITDKTSDKIQREGRDKKRIDGKIKAVEKVKTDSSKRHID
TENDSRERKKPKTLDKEKEHSRNKDRQHKNGKLDTSKREKDVKKMNKSSSQGGSSSSSHS
RGSSASSNKTKQNVSSSNGKRPENKRKSLSHADLFGDESPEEADPMEVDDDDDDDDDGEE
VLVRKSADALKRACLNKRKVSELTPSSSDDEGDVEGGSADRDEVDQLEIDISGFQDDFDL
DSDPMEECLRIFNESKDVKKEDKGRQTKQPSRDSEEEKSPETTLIPGQKKRVSHCSAKSE
STKVRPYKRASAQEVCYQRMQLAQHQAAQLSASVKAAAQSSSSSFPGERKRIAHRPSPQI
SSSKTSSADAKPAVSRVLSPNQTHQTVKAQTTAGILSKTMSTVTGKRMAHTPTMKSSSMK
RPIIPTDFGAKVPTNVRQRYLNIFIDECVKFCPSEDAAFQMGLDEEKLVYERSSSKNIYL
NVAVNTLKKLRSKCSSRPSPVTKDPGVFANRKAQSHEEVLGGRLAATTSFTVNRMGKQQE
EKLTGLTLYRKLKTYMMTEEQLQEHGYPRFNPEAPGKAFVYNVPEKKAITDPLNKICCRC
GAEYRINVNGNCVRKEECSFHWGRLRRHKGSGGWETNYNCCAGAVGAPGCQVCKQHVQDG
RKESLDGYMSTFSKSLPPDGNGGVFALDCEMCYTKQGLELTRVTVIDSEMKVIYDTFVKP
ITKVVDYNTRFSGVTQEDLESATITLRDVQAVLLSMFSAESILIGHSLESDLFALKLIHS
SVVDTAIVFPHRLGLPYKRALRNLMAEHLKRIIQDNVEGHDSSEDASACLELMIWRIKED
AKVKR
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgttacgctccaccggcttcttccgagggatcgactgcccgttttacgccgagtccggc
gacgctggcggcggcaggaatgggtgtaacagagcctactgtcacttcaggcacagccag
cagcggcggccgtcctacggagctccgccggcggatgtgaagaagcacagggagccgctc
tccgcccagaaagaacaaggttatgatcccttcaacccagaagtggtgcggccccaggag
cagcagaatgggaagccggctgagtcgggggacttcagcggggccctggagcaggtcaac
agggccattgaggaggcccgcagtgaggtggagtgggagaagaggaagctctctcgaatt
ggggacgaaccatacaatcccagtgggagtaccagtttgtcttcatctcgtgccacaaaa
agtaaagctgcagcttcacacatggcctacgatcctgggagctatcagatcacatcagtt
ggttataatccctcccccagctgcagcaagtacaccttggattccgacaaccaggggagc
aacagtaactctatggaatatgttcctacgttgaaaaagcctccaactcggacaaaaacg
tacaaactcccctctcccccttccagcccaaagtattcaatcagcgcagtcgcctcaaag
tgtaaatacactctggacaattcaaaaccttctacagacatggagtatgacccactctcc
aactacacggcaggaatcgcagcaaagagcaagagggcagaggctgcccgggctgttaag
actcatgggagcaagacacacaagttacctgtgcgtgatttatcagatgaggagtacgtt
gtagctgtgaaaaaaacacagcagccgagtgtagacatgtccaaatacactttttctgac
tctgaggaggagagctctggaacggagtatcgacccacctctcttagaaatctccagcag
agaaaaggcaacactggaacggctggtgtcgcttttgcgaaggagaaaaaagagagaact
gaaagtgtaataaatgcactgacacaaaggaataaagaggactcggcacaggactcggat
gtccaggtagacattaaacgaaagggcaatccagagaaaaataagctggttagtcgaatt
agtcatgagaaaagtggcaaatctgagaaaatccataaatttgaaaaagaggcaaagaaa
acgttaagtagtaaaagcggtagcagcagtcgcaacgacaaaggttcaataaaacactca
aaccaggagtctgcaaaaaaagagaacaagagtcttgggaagaaagatgatagtaaaaac
acgataacggataagaccagtgataaaattcagagggagggaagagacaaaaagagaatt
gatggtaaaatcaaggctgtggaaaaagttaaaacagactcaagcaaacgacacatagac
acagaaaatgattcaagggaaagaaagaaacccaaaacattagacaaggaaaaggaacac
agcaggaataaggaccggcaacataaaaatggtaaacttgacacgagtaaaagagaaaag
gatgtgaagaaaatgaacaaaagcagttctcagggtggcagcagcagcagcagtcacagt
agaggaagttctgcaagcagcaataagacgaagcaaaacgtcagctcatcaaatgggaaa
agacctgagaacaagcggaagagtctgagccacgcagatctgtttggagacgagagtcca
gaagaggctgatccgatggaggtggatgacgatgacgatgacgacgatgatggagaggaa
gttttggtgagaaagtcagctgatgctttaaagagggcgtgtctaaacaagaggaaagtg
tccgagctgactccgtcttcctctgacgatgagggtgacgtggagggaggcagcgcagat
agggacgaagtggatcaactcgaaatcgacatctccggtttccaggacgattttgacctt
gactcagatcccatggaggagtgtttgcggatcttcaacgaatccaaggatgtaaagaag
gaagacaagggcaggcaaaccaaacagccctctagggattcagaggaggagaaaagccca
gagaccactctcatccccggtcaaaagaagagagtctcacattgttctgccaaaagtgaa
tcaactaaggtacgaccgtacaagagagcctcggcccaggaggtctgctaccagcgtatg
cagctggcgcagcatcaagctgctcagctctctgcttcagtcaaagctgctgcacagagc
tccagctccagcttccctggagagaggaagaggatagcacaccgtcccagcccacagata
tcatcctccaaaacaagttctgcagatgctaaaccagctgtcagtcgagtgttatccccc
aaccagacgcatcagactgtcaaggctcaaaccacagccggtattttgtccaagactatg
tccactgtgacggggaagaggatggcgcacactcccaccatgaagagttcttcgatgaag
cggcccatcatccccactgactttggggccaaagttcctaccaacgtccgccagcgctac
ctcaacattttcatagatgaatgtgtcaaattctgcccatcagaggacgctgccttccag
atgggcctcgacgaagagaagctggtgtatgagcgcagtagcagtaagaacatctatctc
aatgtagctgtcaacaccttgaagaagcttcgcagcaagtgcagctcccgtccatcacct
gtcaccaaggacccgggggtgtttgctaacaggaaggcccagtcccatgaggaagttctc
gggggtcggttggctgctacaaccagcttcactgtcaacaggatgggtaaacagcaggag
gagaaactcacaggactcactctgtacaggaaactgaagacgtacatgatgacagaggag
cagctgcaggagcacggctacccaagatttaacccagaggctccgggcaaggccttcgta
tacaacgtcccagagaaaaaggccatcacagatcccttgaacaagatatgctgtcgatgt
ggagcagagtataggatcaatgtcaatggcaactgtgtacggaaagaggaatgcagtttt
cactggggacgtctacggagacacaaaggctctggaggctgggagaccaactacaactgc
tgtgctggtgcggtgggcgctccaggttgccaagtgtgcaagcaacatgttcaggacggg
cggaaagagtcgttagatggctacatgtcaacgttcagtaaatctctaccaccagatggc
aacggaggggtgtttgctttggactgtgagatgtgctacacaaaacaaggcctggaactg
acgagggtgacggtcattgactctgagatgaaagttatctacgacaccttcgtcaaacct
ataaccaaagtggtggattacaacacacgattttccggggtgacgcaggaggacttggag
agcgccaccatcaccctgagagatgttcaggccgtgctgctcagcatgttcagcgctgaa
tccattctcatcggacacagtctggagagcgacctcttcgctctgaagctaatccacagt
tcagtcgtagacacagccatcgtgttccctcaccgcctcggcttaccctacaaacgtgcc
ttgagaaacctgatggctgaacacctcaaacgcatcatccaggacaacgtggagggccac
gactcgagcgaagatgcgtccgcctgcctggagctgatgatctggaggatcaaggaggat
gcaaaggtcaaaagatga
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