Hippoglossus stenolepis (Pacific halibut): 118121113
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Entry
118121113 CDS
T08308
Symbol
lrrc8db
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Db isoform X1
KO
K22038
volume-regulated anion channel
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118121113 (lrrc8db)
Ion channels [BR:
hsp04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
118121113 (lrrc8db)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118121113
NCBI-ProteinID:
XP_035032665
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Position
14:24229791..24242693
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AA seq
858 aa
AA seq
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MRRLFTGMFTLTEVASLNDIQPTYRILKPWWDVFMDYLGIVMLMLAIFSGTMQLTKDQVV
CLPILEQTPEEAGGFLGPQPPETADGFWNKESAIGEQAAPLMAKRPPDSVAPTIHMAQQS
TVGQPQPTGVRTKLDFQQYVFVNQMCYHVALPWYSKYFPYLALIHTIVLMVSSNFWFKYP
KTSSKIEHFVSILGKCFESPWTTKALSETACEDSEENKQRLADASCLLKHLSTSSEEGSP
NQSAPVLTKSGVTFSAEKLVSEVPSMTILDKKDGEQAKALFEKVRKFRAHVEDSDLIYRL
YAIQTVIKTVKFILILCYTMTFVASIDFDHVCEPEIKHLTGYSKFHCTHNMAFMLKKLLV
SYIALICVYGVICIYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYD
QLYSKRFGVFLSEVSENKLREISLNHEWTYEKLRQHVTRNAQEKLELHLFMLSGVPDAVF
DHTDLEILKLELIPEARITAKISQMINLQELQFYHCPAKVEQTAFIFLRDHLRCLHVKFT
DVAEIPSWVYLLKSLRELYLIGNLNSENNKMIGLESLRDLRHLKILHLKSNLTKVPTNIT
DLSPHLIKLVIHNDGTKLLVLNSLKKMMNLAELELHNCELERIPHAIFSLSNLQELDLKS
NNIRTIEEVISFQHLKRLTCLKLWHNKIINIPLSISHVKNLESLYLSHNKLESLPSSLFT
LLKLRYLDVSHNSIVVIPLEVGFLQNLQHFAINNNRVEVVPKQLFKCNKLRTLCISHNCI
SSIPEKIGQLTQLAHLEMKGNCLDRLPVQLGQCCLLRRSCLMVEDHLFDSLPMEVKESIN
QESSVSFTNGCKCLSDGR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggctcttcactggaatgttcaccctcacagaagtagcctccctgaacgacatc
cagccaacctatcgaatcctgaaaccatggtgggatgtcttcatggattatctcggtatt
gtcatgctgatgttggccatattttcaggaaccatgcagttaaccaaagaccaagtggtc
tgtcttcccatcctggaacaaactccagaggaggctgggggcttcttgggcccccaacca
ccagagacagctgatggtttctggaacaaagaaagtgccattggggagcaagctgctccc
ctaatggctaaaaggcctcctgatagcgttgcacctacaattcacatggcacagcaatct
actgtcgggcaaccccaacctacaggtgtcagaaccaagctggattttcagcagtatgtt
ttcgtgaaccagatgtgctaccatgttgcccttccttggtattccaaatatttcccctac
ctcgctctaatccacactattgttttaatggtcagcagcaacttctggttcaagtacccg
aagacaagctccaaaatagaacattttgtgtccatccttggaaaatgttttgaatcacct
tggactactaaagcactgtccgagaccgcttgtgaggactcggaggagaacaagcaaaga
ctggctgatgcgtcctgcctccttaaacatctgtccacaagcagcgaggaggggagtcca
aaccagtctgccccagtgctgactaaatctggggtcacgttctcggctgaaaagcttgtg
agtgaagttccctctatgacgatactggacaagaaagatggggagcaagcaaaggccttg
tttgaaaaagttcggaaattccgtgcccatgtggaagacagtgacttgatttacaggctg
tatgccattcagacagtcatcaaaacagtcaaattcattttgatcctttgctacacaatg
acatttgttgcctctatagattttgaccatgtgtgtgagcctgagataaagcatttgact
ggatactctaaattccattgtacacataacatggctttcatgttgaagaagctacttgtc
agctatattgctctcatatgtgtttatggcgttatttgcatatatacattgttctggctt
tttcgtcggccactaaaggagtattcctttgaaaaagtcagagaggagagcagcttcagt
gacattcctgatgttaaaaatgactttgctttcctcctccacatggtcgatcagtatgac
cagctgtactcaaagcgttttggagtttttctctcagaagtgagtgaaaacaaacttcga
gagatcagcctgaaccacgagtggacctatgagaagttgcgacagcatgtaacacgcaat
gctcaagaaaagctggaacttcatctttttatgctatccggagttccggacgctgtgttt
gatcacaccgatttggaaatccttaaactagaattaatcccagaggccaggataactgct
aagatctcacaaatgataaacctccaggagttgcaattctatcactgtccagccaaagtt
gagcagactgctttcatttttcttcgcgatcacctacggtgccttcatgtcaaattcaca
gatgtcgctgagattcctagctgggtatacttattaaaaagcttaagggaactatacctg
attggtaacctgaactctgaaaacaataaaatgattggactcgagtctctccgagacctc
aggcacctaaagattctgcatctcaaaagcaacctcacaaaggttcccacaaacataacc
gatctgtccccacatctgatcaagttggtcattcataatgacggtacaaagcttttagta
ctgaacagtttgaagaaaatgatgaatctcgcagagttggagcttcataattgtgagctg
gagcgaatcccccatgctatcttcagtttgagcaaccttcaggagcttgatctcaaatcc
aacaatattcgtaccatcgaggaggtcatcagctttcagcacctgaagagactaacgtgc
ctcaagctttggcacaataagatcatcaacattcctctgtcaatcagccacgtcaaaaac
cttgagtcactctatctctcgcacaacaagcttgagtctctaccctcttcattattcacc
ctcctgaagttgaggtaccttgacgttagccataactccatagtggtgataccactggag
gttggctttctgcagaacctccaacattttgccattaacaacaacagagtcgaggtcgtc
ccaaagcaactgttcaagtgtaacaagctgaggaccttatgtatcagccacaactgcatc
tcgtccattcctgagaaaattggccaactcacacagctggcacatctggaaatgaaggga
aactgcctggatcgtctgcccgtccagctcggtcagtgctgcctcctccgcaggagctgc
ctgatggtggaggatcacctcttcgactctctccccatggaggtcaaagagagcatcaat
caggaatccagtgtttcttttacaaatgggtgcaagtgtctaagtgatgggcggtag
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