Hippoglossus stenolepis (Pacific halibut): 118121115
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Entry
118121115 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC118121115
KO
K06260
platelet glycoprotein V
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118121115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hsp04090
]
118121115
CD molecules [BR:
hsp04090
]
Proteins
118121115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_9
LRR_LRWD1
LRRNT
DAG1
Glycophorin_A
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
118121115
NCBI-ProteinID:
XP_047198933
LinkDB
All DBs
Position
14:complement(13337364..13348613)
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AA seq
1190 aa
AA seq
DB search
MVTDIPKEMPPLTYQLYLDDTNMNVINDQSLENLELMQRFGLTQSQLHTIRPLAFHVAPK
LRFIKLSSNNLTTLPPLVFSPLTILEQLFLDGNQLETISPEIFNRLVQLQVLDLGRNKLM
NLAPDVFNGLTELTYLNLARNRLKRLSPTIFHSLSNLLYLYMYNNKLEALESELFDALIN
LQVLLIDHNQIARLPRLLFHPLTNLTNLTLSSNQLQGVPQETFYNMPKLIKLTLYNNPLL
SLPHQLMGHMPEMKELYLYYTNLTTVPGNLFSNMSGLLMLHFHLNAHLRELPADLFCCLP
HLEKLSLKFNNLHYLHPQLFSKLTSLNMLVLSDNSLQNLNENIFQGLKKLQTIDLKNNYL
KTLPGDIFLSNAALGTLNMSGNPWDCMCSIRGIARWIRSNARVVIDKDKVTCRSPWNKLF
HTVESLRDQDFRFCDTTTDFFRKKNLSASAQPFHAISTSGTASTTTPPATPSSTSEVIIP
SSTKPANSTTSDAATSSLHTVTTALPKEELPLSTETHMSYQPPQVFYDRLVIEQGPEYVH
HNHHRGWVLVWFLPSDTAWAGFLMFCHILLATTGLFLILAAMYALYRLDKTMDKLKAECA
RKXGXHTMLSAFKTSDSKRNMDLPLTLHVFLLLCSLNAVVWACPVGCKCQANKILCSGLS
DFPTPLPSSTTTLYVSNSSIYSLKPEDLTVFSNALSIFVIKDTALKEVHPGTLDATLNIG
ALGFTGTELQDLPEALFQNLQSLESLTLKSNKLLVLRPHWFSSLKYLKILDLSKNLFTSV
PFETFNTLTQLSYLLLSGNNISQLPVETFMGLSKLKTLRLSKNSLQELPVGSLDDLGNLE
ELSLNDNLITHLHRDLFSNTRKLQKLFLSNNRLTSLPLGIFLNLPLLSQMSLYENQLESL
GPGVFGPMPLQELWLYDNKLSRVEDDTFRNLTQLHLLVLSRNQINYVSTGTFRGLEKVGE
ISLHTNLLTTLQAGTFQGLPSLVNISLEHNFISSLPVGFLQGVSHLGEIDLRNNSFNNMP
QESLDALTVINEVLLQQNPWRCDKDILPLRDWLRQHPTKANQTLVVCEVPFNLNGEVIAV
LTNENLMPLSSTEDPVLTSTEKRRKPNTPPTRRSTVPPAVKTTPTSEPEEVTSSGQGEQG
TVSNDTAITLIIIAVVSTVIISTVIISCVCWRKNKRGRGNIGRRSKNSVL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggtcacggacataccaaaggagatgccccctctgacataccagctgtacctcgacgac
acaaacatgaatgttataaacgatcagagcctggaaaacctggaactcatgcagcgcttc
ggtctgactcaaagccaactacacaccatccgaccgctggctttccacgtcgctccaaag
ctcaggttcatcaagctgtcgtccaacaatctcaccacgcttccccctctagtgttcagt
ccgctgaccattctagagcagctgtttttagatggaaaccagctggagaccatttctcca
gaaatatttaacagacttgttcagttgcaggttctggacctgggccgcaacaagctgatg
aatcttgctccggatgttttcaatgggctgaccgaactcacctatctgaaccttgccagg
aaccgcttaaagaggctttctcccaccatctttcactccttgagcaaccttctctatctc
tacatgtacaacaataaactcgaggcgctggagtctgagctgtttgatgcactcatcaac
ctccaggtgctactgatcgaccacaaccagatcgccaggctcccgcggcttctgttccat
ccactgacgaacctgacgaatctcactttgtcctccaaccaacttcagggtgtcccccaa
gaaaccttttataacatgcccaagctgattaagctgaccctctacaacaaccccttgctt
tctctaccacaccagctgatgggtcacatgcctgagatgaaagaattgtatctgtactac
accaatctcactactgttcctgggaatttattcagcaacatgtccgggctgttgatgctt
cacttccatttaaatgcccatctcagagagttgcccgcagaccttttctgctgtctcccc
cacctcgagaagctctcgctgaaattcaacaacctccactatctacatcctcagctgttc
tccaaactcacctcactgaacatgttggttctgagcgacaacagtctgcagaacctaaac
gaaaacatttttcagggcctcaaaaagcttcagaccattgatttgaagaataactacctc
aagactctgccgggagatattttcttgtcaaatgcagcgttgggcactttgaatatgagt
ggcaacccctgggactgcatgtgcagcatcagaggtattgcaagatggataagaagcaat
gcgcgtgtggtcattgacaaagacaaggtgacatgtcgcagtccatggaacaaattgttc
cacacagtagaatctttgcgtgatcaggacttcagattttgcgatactaccactgatttt
tttagaaagaaaaacttgtctgcctcggcacaaccattccacgccatctcaaccagtgga
acagcctcaacaaccacaccaccagcaacaccatcaagcaccagtgaagtcatcatacca
tcatccaccaaacctgcaaattcaaccacctccgatgctgcgacatcctccctccacact
gtaaccaccgctctaccaaaagaagagctccctctcagtaccgagactcacatgagctat
cagccgccacaggttttctatgaccggctggtgatcgagcaggggccggagtatgttcac
cacaaccaccacaggggctgggtgttggtgtggtttctgccctcagacacagcctgggct
gggttcctgatgttttgtcacatccttctcgcgaccacaggcctgttcctcattcttgct
gccatgtatgctttgtatcgcctcgacaagaccatggataagctgaaggctgagtgtgcc
cgtaaataagggtaacacaccatgttatcagccttcaaaacaagtgactccaagagaaac
atggacctgccactgacccttcatgtgttccttcttctctgttctctaaatgctgttgtt
tgggcttgtccagttggatgcaaatgtcaagcaaacaaaatactctgcagtggtctctca
gacttccccacacctctgccctcatctaccactaccctctacgtctccaactccagtatc
tactctctgaaaccagaggacctgactgttttctctaacgccctcagcatctttgtgatt
aaagacactgctctgaaagaggtgcaccccggcacacttgatgccactctgaatataggt
gccttagggtttactggcacggaactgcaagatctcccagaggccttattccaaaatctt
cagagtctcgagtctctgactctaaagagcaacaaactcctggtactccgccctcattgg
ttttcctctctgaagtatctgaaaattcttgacctaagcaagaatcttttcacttctgta
ccttttgaaacttttaacactcttacccagctaagttatcttttactttccggaaacaat
atcagtcaactgcctgtggagacattcatgggtctttctaagcttaaaaccctgcggctt
agtaaaaactccctacaggaacttcctgttggcagtctggatgaccttggcaatctagag
gaactatccctaaatgacaatctaatcactcacctccaccgtgacctgttctctaacact
cggaagctccaaaagctgttcctctctaacaacaggcttacatctcttccactggggatc
tttttaaaccttcccctcctttcccagatgtcactgtatgaaaaccagctggagagtctg
ggtccaggggtgtttgggccaatgcccttgcaggagctgtggctatatgacaacaagctc
agccgtgtggaggatgacaccttcaggaatcttactcagttgcatctgctggtgcttagt
cgcaaccagatcaactacgtttctaccgggaccttcagagggttggagaaggtgggagag
atatcacttcacaccaatctgctcacaacgttgcaagctgggactttccaaggtcttccc
agcctggtcaacatttccctggagcataacttcatcagctcactccctgtgggttttctg
cagggcgtgagccatcttggagagatagacctgcgaaacaattccttcaacaacatgcca
caggaaagtctggatgcactcactgtgataaatgaagttctcctacagcagaatccctgg
aggtgtgataaagatattctgcctcttagggattggctgagacagcacccaaccaaggcc
aaccaaacccttgtggtgtgtgaagtgcctttcaatctgaacggggaggtgatcgctgtg
ctgacaaacgagaacctgatgcctctcagctctactgaggatcctgtgttgacttcaacg
gagaagaggaggaaaccaaatacccctccaactagaagaagcactgtcccacctgctgtc
aagaccacacccacctcggagcctgaggaagtcaccagcagcggacaaggggaacaggga
acggtttctaatgatactgcgataacccttatcatcatcgcagtagtgtccactgtcatc
attagcactgtgatcatcagctgcgtgtgctggaggaagaacaagagaggcagaggaaat
ataggccgcagaagtaagaactctgtgctgtag
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integrated database retrieval system
