Hippoglossus stenolepis (Pacific halibut): 118121191
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Entry
118121191 CDS
T08308
Symbol
ccdc50a
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118121191 (ccdc50a)
Membrane trafficking [BR:
hsp04131
]
Autophagy
Other autophagy associated proteins
Others
118121191 (ccdc50a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
HydF_dimer
Motif
Other DBs
NCBI-GeneID:
118121191
NCBI-ProteinID:
XP_035032813
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Position
14:13356970..13374999
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AA seq
633 aa
AA seq
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MAECNVSIDQNELPGVKEVCRDFAVLEDHCLAYNLQEQEIESHLASNVHKSRLVQKDLQV
AKKLQEEEDKRAKIQSQKQHVDIERQDNEIAQEIQEELVRQAEHQRQQEEKDAAIARKLQ
EKEMKEERRRQKQLEATFEEEYFEDHGAARRPLDLDKHTRLKSTSPGRHDEHAPVGSHRD
YSPDCSSTEPKRSRYPRQDPAAPHSHSRYPEHHLVAEGGRSRHADPYPEHLLPSRRKHGD
RYPEYEPTQTGRARGHGGEDPERVVRSKERPARPPPPHTHMERDRHRDKSRDLDLEKHAG
KDQRRGREQDLRGMRAGGRDRERSRDRGQSGDRYRERERQRQKEKESARARTRSMERGLD
EDYLEQGHGREGSREGRASWFEEEDEGERRARGRQRVQSNPEEVFDESRANEGRGDAREL
WDPRQGEGPSKERNHSHPSAETGRIVHRGSGAVIAETELKLSEATKGLTKLDIREQELKD
MEVARKLQDEEIKVGKEARQATKGNVRAAQVAQDEEIARLLMEQEKKEYRKNRDREKEKE
RERERLAMERMAMERRRPEGDYRPNSEEVVRPRTREEYEHQKQKNHNKPARPPQPRPHDY
ENVNPGFGYSDHPAPPRAPTRPEAAYKGAYYKR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatgtaacgttagcatcgaccagaatgagctgcccggagtgaaagaggtgtgc
cgagactttgctgtgctggaggaccactgccttgcctacaatctgcaggaacaagaaatt
gagagccacttggcgtccaacgtccacaagagccgcctggtgcagaaggacctgcaggtg
gccaagaaactgcaggaagaggaggataagagggcaaagatccagagccagaaacagcac
gttgacatcgagcgccaagataacgagatcgcccaggagattcaggaagaactggtccga
caggcagaacaccaacgacagcaggaagaaaaggatgcggccattgctcgtaagctgcag
gaaaaggagatgaaagaggagcggaggagacagaaacagctggaagcaacttttgaggag
gagtactttgaggatcatggagctgcaagaagacctcttgatttggacaaacacacccgc
ctcaaatccacctcaccaggccgacatgatgaacatgccccagtgggctcacatcgtgac
tactctccagattgtagctcaacagagcccaaaaggagcaggtacccaagacaggaccca
gcagcaccccacagccattccagataccctgagcaccacctggtggcagaaggagggcga
agcaggcatgcagatccatacccggagcacctgctgccctctagaagaaagcatggggac
aggtacccggagtatgaacccacacagaccggtagagccagaggccacgggggggaggac
ccagagagagtggtcaggagcaaggaaagaccagccagaccacctccgccacatacccac
atggagagggacaggcatcgagacaagagcagagacctcgacttggagaaacatgcggga
aaagaccagaggagaggcagagagcaggacctcagggggatgagagcaggaggacgagac
agggaaagatccagagatagaggacagagtggggacagatacagagagagagaaaggcaa
agacaaaaagaaaaagagagcgcacgagcaagaaccaggagcatggagagaggactggat
gaggattatttggagcagggtcatggcagggaagggtcgcgggagggcagggcttcctgg
tttgaggaagaggacgagggtgagaggagagccaggggtcgacagcgtgtccaatccaac
ccggaagaggtgtttgatgagtccagggccaacgaaggcagaggggacgccagggaattg
tgggaccctcggcagggggagggtcccagcaaggaacgcaatcattctcatcccagcgca
gagacaggtcgtattgtgcaccgggggagtggagcagtcatagcggaaactgagctcaag
ctgagcgaagccaccaagggcctgacgaagctggatatcagagagcaggagctgaaggac
atggaggtggccaggaaactgcaagatgaggaaatcaaggtggggaaggaagccagacag
gcgaccaaggggaacgtacgtgcagcccaagtggcgcaggatgaggaaattgcccggctg
ctgatggaacaagagaaaaaggagtacaggaagaatcgagaccgggagaaagagaaggaa
cgagagagggagaggttggccatggagagaatggcaatggaaaggaggcggccagaggga
gactacaggccaaattcggaggaagtcgtgcggcccagaacacgagaggagtatgaacac
cagaagcagaagaaccacaacaagcctgccaggcctcctcagcctcgaccacacgactat
gagaatgttaatcctggttttggctactcggaccatcctgcccctccgcgcgctcccacc
agacctgaggctgcttacaaaggtgcctattacaagcggtga
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