Hippoglossus stenolepis (Pacific halibut): 118121349
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Entry
118121349 CDS
T08308
Symbol
med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118121349 (med16)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
118121349 (med16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT140_1st
WD40_WDHD1_1st
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR35_TULP_N
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
DSE1_N
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
118121349
NCBI-ProteinID:
XP_035033057
LinkDB
All DBs
Position
14:325240..336029
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AA seq
835 aa
AA seq
DB search
MELAYVCEWDRRQRSTHCPSIPLVCSWSCRNLVAFTTDMKNDDDDKDVSHMIHIMDTEHP
WDIYSINSGHTEVISCLEWDQSGSRLLSADGDGQIKCWSMSDHLVNSWESVLSSSLDGDP
IVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTV
SLLKPGDTLLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVVVSVVS
EKCRIDTELLPSLFLRCTTDPLRREKYPAVTHLKFLTRENSEQVLLCASHQSGSIVECWS
LRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTNDLERVSAVALPKLPISISNTDLKV
ASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGSSSSSSQRPGDESAIKRQRTGGP
ALHFKALQFSWTSLALTGVDNHGKLHMLRVSPSMGQVLEMNTTLRHLLFLLEYCMVTGYD
WWDVLLHVQPTMVHNLVEKLHEEYMRQNQALQQVLATRIVAVKASLCKLSTATAARACDF
HAKLLLMAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKNTDTDIDKVMINLKTEEFVLD
GPPLQSLQQLIQWVGDFVLYLLANLPNQGSMVRPGFGFMRDGVSLGMLREMLVMIRIWGL
LKPGCLPTFTATSDNQDSMQLLFRLLTKLWLCSRDDGPPQDPDETLIDECCLLPSQLLVP
GMDWLPVNDGVIVRLQAKHPLRLQFGKASSLPGGGGTAPLEVFTRSPGPQKMDHLRCVHM
GVCPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRIPPALLT
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggagctggcgtacgtctgtgagtgggacagacgtcagaggagcactcactgtccgtcc
atccctctggtctgttcctggtcctgcaggaacctggtggccttcaccacagacatgaag
aatgacgacgacgacaaagatgtcagtcacatgatccacatcatggacactgaacacccg
tgggacatttattcgatcaactctggacacactgaggtcatttcctgtctggagtgggac
caatcaggctcaaggctgctgtcggccgacggtgacggtcagattaaatgctggtcgatg
tcggatcacctggtgaacagctgggagagtgtcctgtccagctctctggatggagatcca
atcgtggctctgagctggcttcataacggcgtcaaactggcgctgcacgtcgagatgtcg
ggttctacaaacttcggtgagaagttctctcgggtgaagttctctccatctctgactctg
tttggtgggaagccgatggagggctggttggctgtgacagtgagcggattagtcacggtg
tcgctgttgaagccaggtgacactctgttgacggctagcgagagtctgtgccggctaaga
ggtcgggtggcgttagctgacatcgccttcactggaggagggaacattgtggtggcggca
accgacggcagtagctcgtctcccgttcagttctacaaggtggtggtgagcgtggtcagt
gagaagtgtcgcatcgacactgagctgttaccgtcgctgttcctgcgctgcaccaccgac
cccctgagaagagagaagtacccggctgtgacccatcttaagttcctgacccgagagaac
tctgaacaggttctcctctgtgcgtctcatcagagtggcagtattgtggagtgttggtct
ctgaggaaggagggacttcctgtcaacaacatcttccagcatcgttcaccagttgtgggg
gagaagcagcccaccatcttgaagtggaggatcttgaccaccactaacgacctggagcga
gtctcggctgttgctctgcccaaactgcccatctccatctccaacaccgacctgaaggtg
gcgtcagacaccaagttctgtcctggacttggtctggctctggcttttcatgatggaagt
attcaaatcctccaccgtctgtctcttcacaccatgggcgttttctacggctcctcctcc
tcatccagtcagcgacccggtgacgagtccgccatcaagcgacagagaaccggaggtcct
gcgctccacttcaaggcccttcagttctcctggacgtctctggctctaactggagtcgac
aaccacggaaagctccacatgttgcgggtgtcgccctctatgggtcaggtgctggagatg
aatacaacactgcgccacctgctgttcctgctggaatactgcatggtgacaggctacgac
tggtgggacgttctgctgcacgttcagccaaccatggtccacaacctggtggagaaactg
cacgaagagtacatgaggcagaaccaggctctgcagcaggttctggcgactcgtatcgtg
gcggtgaaggcgtcactctgtaaactctccacggcaacggcggctcgagcctgtgacttt
cacgccaaactactgctgatggcgatcagctcgactctgaaatctctgttgcgaccgcac
gtcctcaacacgccagacaagagccccggagaccgccttacggaaatctgcgccaagaac
accgacactgatattgataaggtgatgatcaacctgaaaacggaggagtttgtgttggac
ggccccccccttcagtcgctgcagcagctcatccagtgggtgggagacttcgtcctctac
ctgctcgccaacctgcccaaccagggctccatggtccggcccgggttcggcttcatgagg
gacggggtgtctctggggatgctgagggagatgttggtgatgatcaggatctggggtctt
ttgaaacctgggtgtctgcccacgttcaccgccacgtctgacaaccaggacagcatgcag
ctgctgttccgactgctcaccaagctgtggctctgctctcgggacgacggccccccccag
gaccctgacgagacgttgatagacgagtgctgcctgctgcccagtcagctgctggtgccc
gggatggactggctgccggtgaacgacggcgtcatcgtgaggctgcaggcaaaacacccg
ctcagactgcagtttggaaaagcttcgtctctgcccggaggaggaggcaccgcccctctg
gaggtgtttaccaggagtcctggtcctcagaagatggatcacctccgctgtgttcatatg
ggagtttgtcccactgaggagagtaaagcctgcaccaggtgcggctgtgtgacgatgctt
cgttctcccaacaagacgaacgccatgaagcagtgggagcaacgctggatcaaaaactgt
ctgtgtggaggtctctggaggaggatcccccccgcattgctcacctga
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