Hippoglossus stenolepis (Pacific halibut): 118121354
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Entry
118121354 CDS
T08308
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsp03016
]
118121354 (trmt13)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
118121354 (trmt13)
Transfer RNA biogenesis [BR:
hsp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118121354 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Gon7
Motif
Other DBs
NCBI-GeneID:
118121354
NCBI-ProteinID:
XP_035033065
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Position
14:complement(370212..373833)
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AA seq
449 aa
AA seq
DB search
MAAPEFCSFFLEKKKRFCKMMVSRGRRFCGEHATMEEGSSSRRIVCPLDPKHTVSEDKLD
KHLKKCNSREKEKPVYYVANINAGSADGDECQQQVSLSERSRTELHSLLDKLRTAVTDLQ
CNVEDNVMCHPVLQGELNNPKNGDSAHKHLKQQSSILGHLEELGLLGGGRCFVEFGAGRG
KLSHWIHEALKTCEDLQLLLVERCSTRFKVDGKHQDVGVQFERLQVDIQHLDLSKVPLLR
KKNLPLVGVGKHLCGAATDLALRCLLDTPGLREETEPPPKRLKTSEPAAGPDTGSVFNDT
GLVSDPGPVSGAVLGLAVALCCHHRCEWRHYVGQQFFLQRGLGASEFSAFCRISSWATCG
LRPTNQDATKLGGDEEEHEAAEETDAVNGFLSAAEREQVGRLCKLLIDSGRVHFLTTKGF
NSKLSRYADAHVTLENVLLTAVPSLRPLS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccggagttctgcagcttcttcttggagaaaaagaaacggttctgtaaaatg
atggtgagccgaggaagaaggttctgtggagaacatgcgaccatggaggaaggaagcagc
agcagaagaattgtgtgtcctcttgaccccaaacatactgtgagtgaagacaaactggac
aaacacctgaagaagtgtaactccagagaaaaagaaaaacctgtttattatgtcgcgaac
ataaacgctggatcagctgatggagacgagtgtcagcagcaggtgagtctgagtgaacgt
agcaggacggagttacactctctgctggacaaactgaggactgcagtcacagatctgcag
tgtaacgtggaggacaacgttatgtgtcatcctgtcctccagggggagcttaataaccca
aagaatggagactccgcccataaacacctgaaacagcagtcttctattttaggtcaccta
gaggagctgggacttctgggaggggggcgctgctttgtggagtttggggcaggtcgaggg
aaactgtctcactggatccacgaagccctgaagacctgcgaagacctgcagctgctgctg
gtggagcgctgcagcacccgcttcaaggtggacgggaaacatcaggatgttggagttcag
tttgagaggctgcaggttgacattcaacatctggatttaagtaaagttcctctgctcagg
aagaaaaatctcccattagtcggagtcggcaaacacctgtgtggagcagcgacagatctg
gctctgcgctgtttgttggacacaccaggactgagagaggagactgaaccaccaccaaaa
cgcctcaaaacctcagaaccagctgctggtccagacacaggttccgtctttaatgataca
ggactagtttctgatcctggtcctgtctctggtgctgtccttggcctggcagtggcgctg
tgctgtcaccatcgctgtgagtggcgccactacgtgggtcagcagttcttcttgcaacga
ggactcggagcttcagagttctccgctttctgtcgaatttccagctgggccacatgtgga
ctcagaccgaccaatcaggatgcaaccaaactgggaggagacgaggaggagcacgaagca
gcagaggagacagatgctgtgaacgggtttttgtcggcagctgaacgagagcaggtcggt
cgactctgtaaacttcttatcgacagcggcagagttcacttcctcacaactaaaggattc
aacagcaaactgagtcgatacgcagacgctcatgtgaccctggagaacgttttactgacc
gccgtaccctccctacgtcctctgtcctga
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