Hippoglossus stenolepis (Pacific halibut): 118121388
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Entry
118121388 CDS
T08308
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X2
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04010
MAPK signaling pathway
hsp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118121388
04020 Calcium signaling pathway
118121388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118121388
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118121388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118121388
NCBI-ProteinID:
XP_035033113
LinkDB
All DBs
Position
14:14526165..14617463
Genome browser
AA seq
2530 aa
AA seq
DB search
MLELGSYPVSSQSLTGDHNALGLPRVPGGPDCPVGGVGMGAIRGSSTPRHHILHPSPSDC
EGWQKHRAGLARGSSLYSESHSLLEPQSLSTSYDTLYLPHMSGHAPPLHPNRLGLCLDVA
STFDVGGGMLGVDGDLAVSPNVIKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWEMAR
FGDDVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKR
LEKTEPYFIGMFCFEAGIKVIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGKLHYTCKPQSGILENETVDSSEYEFPCGVRQCPSKYSCHGTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPSWNWIYFVPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNTGPSALDVLKRATTIKR
RGVDVVHRGQPGEEQYGDISSVGVPMARPSIRSVKRGPAAYFRRKERLLRISIRRVVKTH
TFYWTVLGLVALNTLCVAIVHHNQPLWLSTFLYYAEFLFLALFLTEMFLKMYSLGPRLYF
HSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSL
MNSMKSIISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGE
DWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEE
EAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRSRPTYSCSLEEAQGS
IREGRPPPPLNPSNSFMSRGERRKRMTMSVWEQRTSQLRRHRQMSSREILFSGPSEEKDG
PPASAQAQLGHPLSLHRKAMQNTPSGSLKRPADPLASPAKNQATSMSVDKPLGADLSGDI
PETPITVPESLDPTNEPLPDASVSLTIQEPSESETVSESKTLGVNQSHNTFSERRSPRLN
GDRQHRAVKKFRPPDNIDMLTPEMGGLSGIRARRAAHHGDHKSGAKSRGSSPENESHLAS
RSVSRERKRNPRKVEEKEVETKKEEEEVVSKPEESRQVEGEEGDINPPDDQQSSTGDPCP
QKQDELLQQSDPSPPAVPEDDKEEKEAEQEEDKSQLSSTVVIEMPSATLCLELSTITVNS
KDPEICKSEKEEAEATNPVNTVTPNSMFIFKPDNPVRRACHYVVNLRYFEMSILLVIAAS
SIALAAEDPVATSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNVLD
FIVVVGALVAFALTNVLGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSL
KNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYIDYGKDKKEVKRR
DWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSIFYVIY
FVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGAKPLTRYMPQNRHT
FQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHLNTAFTVLFSVECV
LKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQSIDTFNMSFLKLFRAARLIKLLRQ
GYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEETHINQHNNFKSF
SCALMLLFRSATGESWQEIMLSCLGGRQCEADPSLTSEQEGGCGSDFAYFYFVSFIFFSS
FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTDMYEMLTHM
SPPLGLGKKCPSKVAYKRLVLMNMPVDDDMSVHFTSTLMALIRTALEVKIARGGEDRNQM
DLDLQKEISVIWPHLSQKSLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLE
EQKHAPMFQRMDASSLPQEILCNAKSLSFLRHGAGSALTRGGFVALSPISPQEMFLQPLS
RSREEKEEEEGDDDYRSPYLPYLHPHHHHHHHLHTLVQDVVEYKQVIQQARQDPTVVKSP
QRTASIRASSMPRLAVDPQPGLSADSKLMKRSFSTIGDQCVNGLWQEQHSLERVSPDDTY
RPRQRSYRGARVNHREASSHERGRSKERRHLLSPDVSRCNSEERSQDASCERRRSRSPSE
GRTQRQVNTSGSPAHSASESTTPRNRRQLPQTPSRPRPYISYSPLVCQAQTSPTPAAPSE
GQTQAQDAPVGSAEPSWKADKEAGPPAANQGSSGGQVLAQSHPSPHRYISEPYLPYHEDL
GSGEAGDRQHTLTFETAMATSLGRANAISSAPQLRHSWQVPNGHFRKPLGNTSPAGASEL
LSDTDEDDRC
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcctatccggtcagctctcagtctctgacaggggaccacaatgct
ttagggctacctagagtgccaggagggccagactgtccagtggggggtgtgggcatgggg
gcgattcgtggtagcagtaccccgagacaccatatcctccacccgtccccatcggactgt
gagggctggcagaagcatcgtgccggactggccagagggtcaagtctgtattctgagtcc
cactctctcctggagccccaaagtctctcaaccagctatgacacgctttacctcccacat
atgtctggacacgctccccctctgcacccaaaccgtctgggcctctgtcttgatgtggcc
tcgacttttgacgttggaggggggatgctgggggtggatggagatttggcggtgagtccc
aatgtgatcaagagacgtcggggcggcctgatcgagcagagggacattgtaaaagcccac
caggctcataagatccacagcacaccacaggcacgacgcaaggagtgggaaatggccaga
tttggagacgacgttcctggcttgttgagctcaggggatggagggtccgagcgcaaccgg
aaccgcgatggggcggcggtgtccacaggtggcatctccccagccttcaagcagaccaaa
gcgcagcgcgcccgcaccatggccttgtacaaccccatcccggtcagggagaactgcttc
accgtcaacaggtccctgttcatctttggcgaggacaacgtggtcaggaagtacgccaag
aaaatcattgagtggcctccattcgagtacatgatcctcgccacaataatcgccaactgt
atcgttctggctctggagcagcacctccctggagaggacaaaacacccatgtccaagaga
ttggagaagacagagccctacttcatcgggatgttctgttttgaggccggaataaaggtc
atcgccctgggctttgtatttcataaaggttcctacctcaggaatggatggaacgtcatg
gacttcatcgtggttctcagtgggatcctggctgcggcaggggcacatatgaacatctca
gtggacctgaggacgctgagggcggtgcgagtgcttcgacccctcaagctggtttcaggc
atccccagtctgcagattgtcctgaagtcaataatgaaggccatggtccctctgctgcag
atcggcctgcttctgttttttgccatactcatgttcgccattatcggcctggagttttac
agcggcaaactgcactacacctgcaaaccacagtctggaatactggaaaacgagacagtg
gactcctctgagtatgagttcccgtgtggtgtgcggcagtgtccgtccaaatactcctgc
cacggcacctggatcggccctaatgacggcatcacccagtttgacaacatcctgtttgcc
gtcctcactgtcttccagtgcatcaccatggagggatggaccactgtcctctacaatact
gacgatgccttgggccccagctggaactggatctacttcgtccctctcatcatcatcggc
tccttttttgtcctgaacctggtgctaggagtcctctctggggaatttgccaaggagaga
gagcgggtggaaaaccgcagggccttcatgaaactgagacgccagcagcagattgagaga
gagctcaatggttaccgggcctggatcgacagagcagaggaggtgatgcttgcggaggag
aataagaatacaggaccctctgctctcgatgtgctgaagagagccaccaccatcaagagg
agaggcgtggatgtggtgcatcgagggcaaccaggggaggaacaatatggtgacatctcc
tctgtgggcgtccccatggccagaccgagtatcaggagcgtcaagcgaggtccggcggcc
tattttcggcggaaggagcgtctccttcgcatctccatccgccgcgtggtgaagacacac
accttctattggacggtgcttggcctagtggccctcaacacactttgtgtggctatagtt
caccacaaccagcctctctggctgtccaccttcctctactatgcagagttcctgttcctc
gctctgttcctgactgagatgttcctgaagatgtacagcctgggaccacgtctctacttc
cactcctcctttaactgctttgactgcagcgtaattgttggcagcatctttgaagtgctc
tggggtttcttcaggcctggaacttcattcggcatcagtgtcctgcgtgctctccgtctg
ctgaggatcttcaagatcaccaagtattgggcgtctctgagaaacctggtggtctctctg
atgaactccatgaagtccatcatctccctcattttccttctcttcctcttcatccttgta
tttgcgctcctgggcatgcagctcttcggtggcaggttcatctttgaggactacaccccg
acaaactttgacacctttcccgccgccatcatgaccgtctttcagatcctgactggagag
gactggaatgaggttatgtacaacggtattcgctctcaaggaggagtgaagtctggcatg
tggtcctccatctactttattgtgctcacattgtttggaaactacactctgctgaatgtc
ttcttggccatcgctgtcgataatcttgccaatgcacaagaactcaccaaggatgaagag
gaagcagaggcagcgttcaaccagaagcacgctctccagaaagccaaggaggtcgggccg
ttgtcctcctttatgtcctcagagggaagccgtaggaggcggccctacctgtacaggaaa
agagcaatccaccgcagccgccccacctactcctgctccctggaggaggcgcagggcagc
atcagggagggccgcccacccccaccactcaatccctctaactctttcatgtccagggga
gagaggagaaaaaggatgaccatgtcagtttgggagcagaggaccagccagctgcggaga
caccggcagatgtccagccgagagatcctgttcagcggccccagcgaggagaaggacggg
cctcctgcctcagcccaggcccagctcggacacccactgtcgctgcaccgcaaggccatg
cagaatacgccgtctgggagtttgaaacgcccggcagatcccttagcatcaccagccaag
aaccaggctacctccatgtctgtggataagcctcttggagccgacctctctggtgacata
cctgaaacccccatcacggtccccgagtcactggaccccacaaatgagcctctgcctgat
gcctctgtgtctctgaccatacaagagccttcagaatcagagaccgtctctgagagtaaa
acactgggtgttaatcagagtcacaacaccttcagcgagcgcaggagccccagattgaat
ggtgatcgccagcacagggcagtgaagaagttcagaccaccagataacattgacatgctg
actcctgagatgggaggtcttagcgggatcagggccaggagggcggcgcatcacggtgac
cataagagtggagccaaaagtcgggggtcatctcccgagaacgaaagccatttggcaagt
cgctcggtcagcagagagaggaagagaaaccccaggaaagtagaggagaaggaggtggag
accaaaaaggaggaggaggaggtggtgtccaaacctgaggagagcagacaggttgaaggg
gaagaaggagacataaaccccccagatgaccagcagagcagcaccggtgacccgtgtcct
cagaagcaagacgagcttctccagcaatcagacccttctccaccggccgtcccagaggac
gacaaagaagagaaggaggcagagcaggaagaggacaaatctcagctcagctccactgtc
gtcatcgagatgcccagtgcaactttatgtctggagctctctacaatcacagtgaacagc
aaggatcctgaaatctgtaagtcagagaaggaggaggccgaggccacaaatcctgtcaac
actgtgactccaaacagcatgttcatcttcaaacctgacaacccggtgcgtcgagcatgt
cactacgtggtgaacctcaggtactttgaaatgtccatcctgctggtcatagctgccagt
agtatagctctggctgctgaggaccctgtggctacctcctctgactggaataaggttctg
cgttattttgattatgtttttactggagtcttcacatttgaaatgataattaagatgatt
gaccagggtctgatcctccatgacggctcctacttcagagatctgtggaacgtcctggac
ttcatcgtcgtggtgggagcactggtggccttcgccctcaccaatgtgttgggaaataac
aaaggacgggacataaaaaccatcaaatctctgcgagtgttgcgtgtcctcagacccctg
aagaccatcaagagacttcctaaactcaaggcggtctttgactgcgtggtgacgtctctg
aagaacgtcttcaacattctcattgtctacaaactttttatgttcatctttgccgtcatc
gctgtgcagctctttaaagggaagtttttctactgtactgacagttcgaaggacacggag
aaggactgccagggttactacatcgactacgggaaggacaagaaagaggtgaagagaaga
gactggaagagacacgagtttcactacgacaacgtcatctgggctctgctcaccctcttc
actgtttccactggagagggatggcctcaggtcctgcagcattcagtggacgtgaccgag
gaggacagagggccaagccacggcaacaggatggagatgtcaatcttctacgtcatttac
tttgtcgtcttccctttcttcttcgtcaacatcttcgtggctctcatcatcatcaccttc
caggagcagggggataagatgatggaggagtgcagcctggagaagaacgagagggcgtgc
atagactttgcaatcggcgccaagcccctgacccgatacatgccgcagaaccgtcacacg
ttccagtaccgtctctggcattttgtggtgtccccctcttttgagtacactgtcctggcc
atgatcgctctcaacaccattgtgctgatgatgaagtattactctgcaccgccggcgtac
gaggccgtgctgaagcacctgaacacagccttcaccgttctcttctctgtcgagtgtgtc
ctcaagatcatggcctttggctttctgaactactttcgagacacgtggaacatttttgac
tttatcaccgtcttgggcagcatcactgagattgtggtggacctgcagtctattgacacg
ttcaacatgagtttcctgaagctgttccgagctgctcgtctgatcaagctgctgagacaa
ggctacaccatccggattcttctgtggaccttcgtccagtccttcaaagccttgccctac
gtctgcctgctcatcgccatgctcttcttcatctacgccataattggcatgcaggtgttt
gggaacattaagctgaacgaggagactcacatcaaccagcacaacaacttcaagtccttc
agttgtgctctgatgctgctcttcaggagtgccacgggggaatcatggcaggagatcatg
ttgtcgtgtctgggggggcggcagtgcgaggcggacccttctctcacgtcagagcaggag
ggcggctgcggctctgactttgcctatttctactttgtctccttcatcttcttcagttcc
ttcctgatgctgaacctctttgtggctgtgatcatggataactttgagtatctgaccaga
gactcctccatcctgggccctcaccacctggatgagttcgtccggatctggggggagtat
gatcgtgctgcctgtggtcgtatccattacacagacatgtatgagatgttgacccacatg
tcgccacctctaggcctgggcaagaaatgcccctccaaggtggcctataagagactcgtc
ctgatgaacatgcctgtggacgatgacatgtccgtccacttcacctccaccctcatggcc
ctcatccgcaccgcgctggaagtcaagatagccagaggtggagaggacagaaaccagatg
gacctggacctgcagaaggagatcagcgtcatctggcctcatctctctcagaagtcgctg
gacctgctggttcccattcacaaagccagtgacatgaccatagggaagatctatgctgcc
atgatgatcatggactactacaagcagagcaaggccaagaagctccgacagcaactggag
gagcagaaacacgctcctatgttccagcgtatggatgcttcctctctgcctcaagaaatc
ctatgcaatgccaaatccctttcatttctcagacatggtgccggatctgctctcaccaga
ggaggttttgtggcgctcagccccatctccccccaagagatgttcctgcagccgctgtct
cgttcccgggaggagaaggaggaggaggagggcgacgacgactaccgctcaccctacctc
ccttacctacacccacatcatcaccaccaccaccatttacacacactggtgcaggacgta
gtggagtataaacaggtgatacagcaggccaggcaggatccaacagttgttaaatcacct
cagcgaacagcatcgatcagagcgtcctccatgcccagactggctgttgatccacagcct
ggcttgtcagcagacagtaagctgatgaagcgctccttctccaccatcggagaccagtgt
gtgaacggcctgtggcaggaacaacactctctggagagagtcagtccagacgacacgtac
cgaccccgacagaggagctacagaggtgcaagagtcaaccacagagaagcaagcagtcac
gagagagggaggtctaaggaacggcgccacctactgtctcctgacgtgtcccgctgcaac
tctgaggagcggagccaggacgcctcgtgtgagaggagacggtcccgctcacccagcgaa
ggacgcacacagagacaggtcaacacatcaggcagccctgcccactcagcctcagagtcc
actactccacgtaatcgacggcagctgccccagacgccctctcgcccgcggccttacatc
tcctattctcctctggtttgccaagcacagacctctcccacaccagcagccccctctgag
ggacagacccaggctcaggacgcccctgttggctccgcagagccctcgtggaaggccgac
aaggaggccgggccccccgctgcaaatcaggggtcatccggaggtcaggtgttagcacag
agtcacccatctcctcaccgctacatctcagagccctacctcccataccacgaggacctc
ggcagtggcgaggcgggcgacaggcagcatacccttacctttgagactgccatggcgacc
agcctgggacgggccaacgctataagctccgcccctcagcttagacactcgtggcaggtt
cctaacgggcatttccggaagcccttgggcaatacgagtccggctggagccagcgagttg
ctaagtgacacagacgaggacgaccgctgctaa
DBGET
integrated database retrieval system
