Hippoglossus stenolepis (Pacific halibut): 118121461
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Entry
118121461 CDS
T08308
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118121461 (chd1l)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118121461 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
LIG3_BRCT
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
118121461
NCBI-ProteinID:
XP_035033235
LinkDB
All DBs
Position
14:21993245..22006308
Genome browser
AA seq
1026 aa
AA seq
DB search
MSDILLRIKSSVPEKKKKTPLSQCELQRCGLRGIQLRSYQLDGVQWLTQCLQGQEGCILG
DEMGLGKTCQTISLLVYMSGALGNQGPFLVLSPLSVLENWKEELERFAPSLTVLCYKGDK
ERRAELQRGTKTQDFHVLLTTYELCLKDASFLKRWKWKVLVVDEAHRLKNQNSLLHTTLT
KFSVEFRVLLTGTPIQNNLQEIYSLLTFIQPSIFTAEEVDVFVKSYSNVLHQPALAAELQ
SVLEPFLLRRVKSEVAVDLPKKTELLMYHGMSALQKKCYRAILMKDLEAFENEQGNKNRL
INILMNLRKCVDHPYLFDGLEPEPFEMGEHLIEASGKLCLLDSMLTYLHNGGHRILLFSQ
MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAVKNFSSKDIFIFLLSTKAGGVGMNLT
AADTVIFMDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARHTVEELMYSRAVSKLHLTK
AVIEGGRFSLLDQVQSAAAGLKLSEIVKFGVDKLLSTEESSVQDVKLKKILGPTRSGQWV
DDEDSTALKEDEEEEEDDGRSSEFDGQNHMYYFEGKDYSKLPSADDHNSFERLMEEQQAE
FERTAGEGRALRRKTGALLSVALGIPTRKRKTLTEAELELRVQRRQEAAAKRAKVQQDMK
KQQQKEKYKKKMAWWESCGYRSLCLQSVDSEEEEEEEEEEEDDASLCSTDSDSTAIHYVL
GDVTHPHAAQGDAIIVHCVDDSGWWGKGGLFTALELRSDEPRKRYELAGKMKDLDIGNVL
LFPIDDKQSRLDGQDQLALIVSQQRDKANNLSGILLTALDEGLKKIYAAAKRLKASVHLP
RIGHSTKGFNWYGTERLIRKHLASRGIPTFIYYHSKASKNTATPQPSTSATLTSTSCPEP
KLCNPNRLTSETEADTPGPSAPVGSPGPTDLPSFMSGVHVFFYNLPASERKRLARYLFTY
DGDEEDMMSPEVTHIVAEVENSIHSKELQDLVRHYTQAVPVQKAWLDSCFSKQRKVNTEQ
FTHLLR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacatcttgttgaggattaaatccagcgtgccggagaagaagaagaagactcct
ctgtcccagtgtgagctgcagaggtgcgggttaagagggatccagttgaggagctaccag
ctggacggagtgcagtggctgacccagtgtctgcaaggccaggagggatgcatcctggga
gatgagatgggtttgggtaaaacctgtcagacgatctctctgctggtgtacatgtcagga
gctcttggtaatcaaggtccgtttttagtcctgagcccactctctgtcctggagaactgg
aaagaagagctggaacgcttcgccccctctctgactgtgctgtgttacaagggcgacaaa
gagagacgagcggagcttcagagaggaacaaagacacaggacttccatgttcttctcaca
acatatgagctgtgtctcaaagatgcctcattcctgaaacggtggaagtggaaggtgctc
gtggtagacgaagctcatcgattaaagaatcagaactcactattgcacacaaccctgaca
aagttttcagtggagttcagagtcctgctgacaggaacgcccattcagaacaacctgcag
gagatctactccctgctgaccttcattcagcccagcatcttcaccgctgaggaggttgat
gtcttcgtcaagtcttactcaaatgtactacatcagcctgctcttgctgctgagctgcag
agtgtcctggagcctttcctgcttcgtagagtcaagtcagaggtcgctgtcgatctgccg
aagaagacggagctgctgatgtaccatggcatgtcggcgctgcagaagaaatgctacaga
gccattctgatgaaggacctggaggcttttgaaaatgaacaaggaaacaagaaccggctc
attaacatcttgatgaacctgagaaagtgtgtggaccacccgtacctgtttgatgggctg
gagcctgagccttttgagatgggagagcatcttatcgaagccagtgggaagctttgcctc
ctggacagcatgctgacctacctacacaatggaggccatcggatcctgctgttctctcag
atgaccaggatgctggatattcttcaggattacctggagtacagaggttacagctatgaa
cgtctggatgggtccgtccgaggggaagaacgaaatctggcagtgaagaactttagcagc
aaagatatatttatcttcctcctcagcactaaagcagggggagtgggcatgaaccttaca
gctgctgacacagttattttcatggatagtgacttcaaccctcaaaacgacctgcaggct
gcggctcgctgccatcggattggtcagaacagacctgtgaaagtgatccgccttctggca
agacacactgtggaggaattaatgtactctcgagccgtgtccaagctgcacctcaccaag
gctgtcattgaaggaggtcgcttctccttactggatcaagttcagtcagccgctgcagga
ctcaagctcagtgagatcgtgaagtttggggtagataagcttctgtcaacagaagagagc
tctgtacaggatgtgaaactcaagaaaatcctcggtccaacgcgcagcggccagtgggtg
gatgatgaagactccaccgcgctcaaagaagatgaagaagaggaggaggatgatggcaga
agctctgaatttgacggacagaaccacatgtactactttgaggggaaagactacagtaag
ctgcccagcgctgatgaccacaacagctttgaacgtttgatggaggagcagcaggctgag
tttgagagaactgcgggagagggacgagctctgcgacgcaaaactggagctttactctca
gtagctcttgggattccaacaaggaagaggaaaactctgactgaggctgagctggagctg
agggtgcagaggaggcaggaggctgcagccaagagagccaaagttcagcaggatatgaag
aaacaacagcaaaaggaaaaatacaagaaaaaaatggcatggtgggagtcgtgtggctac
agatcactgtgcctgcagtctgtggacagtgaagaagaggaggaggaggaggaggaggag
gaggatgatgccagcttatgttccacagactctgacagcacggctatccactatgttctg
ggggatgttactcatccacatgctgctcagggagacgccatcattgtccactgtgttgat
gactcagggtggtggggcaagggaggcttgtttaccgctctggagctgagatctgatgaa
ccacggaagcggtatgagttggcaggcaagatgaaggatttggatattggcaacgttctg
ctcttccccatcgatgacaaacagtccagattggacggccaggatcaattggccctgata
gtgtcacagcagagagacaaagccaacaacttgtctgggatcctcctgacggctctggac
gaaggtctgaagaagatttatgctgcagccaaaagactcaaggcaagcgttcatcttcct
cgcatcggtcactccaccaaagggttcaactggtacggcacggagcgactcatccggaaa
cacttggcctccaggggcatccccacgttcatatactatcacagcaaagcttccaagaat
accgctacacctcagccatccacctctgccaccttgacatcgacatcctgccctgaacca
aagctgtgtaaccccaacaggttgactagtgaaacagaagcagacactcctggcccctca
gctcctgttgggagccccggccccacagatctccccagtttcatgtcgggagtccatgtg
tttttctacaacctccctgcatcagagagaaagaggctggcccggtaccttttcacttat
gatggcgatgaggaggacatgatgagtccagaggtcactcacatagttgcagaggtggag
aatagcatccactcaaaggagctccaggatctggtgcgtcactacacgcaggcggtgccc
gtgcagaaggcttggctcgactcctgcttctccaaacaacgaaaagtcaacactgagcag
ttcacacacctgctcagataa
DBGET
integrated database retrieval system
