Hippoglossus stenolepis (Pacific halibut): 118121504
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Entry
118121504 CDS
T08308
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hsp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
hsp01100
Metabolic pathways
Module
hsp_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118121504 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118121504 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118121504 (xylt1)
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
118121504 (xylt1)
Glycosyltransferases [BR:
hsp01003
]
O-Glycan biosynthesis
Glycosaminoglycan
118121504 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
118121504
NCBI-ProteinID:
XP_035033319
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All DBs
Position
2:complement(7874175..7957289)
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AA seq
947 aa
AA seq
DB search
MVGGLCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEDGGASVREKRDRVAGNKA
AGSDYFQQRVQQRQQQHLPPPPPGRGAARHIQQPDGYYSHRPKEKSRVDSNNENSVPKDF
DNIDNSNFGARSQPHRQSVGATSSKQQREHLQEKAHAQQQAWRDNSPGLSRSSNEVLPVG
HQPLAVGNNSSYLGGQGVVGVPRQQSPASQAQQAQSQHRHQHPHWRQATAAPLEVTYDQP
PKCEISGKEAISALSRAKSKECRQQIAEVYCRHKEGQLMPEKVTRYCHLEGKANVNVQWD
EDSAESFPLKPVRIGFVLVVHGRAARQFQRLFKAIYHTSHYYYIHVDQRSNFLHRQVQAL
AAQYPNVRVTPWRMATIWGGASLLTMYLRSMADLLAMRDWNWDFFINLSAADYPIRTNNQ
LVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPDGISVDGGSD
WFLLNRMFVEYVMNSKDDLVTNMKRFYAYTLLPAESFFHTVLENSAYCDSMVDNNLRITN
WNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDT
YLFGPFPQGMQSLNSYWENVYDEPDGVASLSDTQLTYFHSFSRLGLARAAASLQGNPKDH
SCRYFPMGHPVSVHLYFQSDQFQGYLVKHHATNLATSKLETMETWVAPKKNFKLSTPASS
TFSRLQLAEIGAEWDAKERIFRNFGGLMGPMDETVGMQKWSKGPNVTVTVVWIDPTNVIA
ATYDILIDASAEFTHYRPPLNQPLRPGVWSVRILHHWSPVAEMKFLIAPLSHHKHQPIRQ
EETVKLHNGPAKNSYMEQSFHGLNPVLNIPVSLGYVEQAKRNAALTGPELEHWLDSLVGE
LWEAADICAVGPTACPVMQTCSKIPWSSLSPDPKSQLGAPHADGRIR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggcttgtgcgctcgcaggttggcccgccgctcgcggtccgcgctcatcgca
gccctcacggtgctgctggtgcagacgctgatcgtgtggaacttcagcagcctcgactcc
ggcgaggacggaggcgccagcgtgcgggagaagagggaccgggtcgcgggcaacaaagcc
gcgggcagcgactatttccagcagcgggtccagcagcggcagcagcagcatcttcctcct
ccgccgccagggaggggggcggctcgccacatacagcagccggatggatattactcccac
cggccgaaggagaaaagtagagtcgacagcaacaacgagaactctgtgcccaaagacttt
gacaacatagacaatagtaactttggtgcacgctcgcagccacaccggcagtctgtcggg
gccacgagcagcaagcagcagcgggagcacctgcaggagaaagcccacgcgcagcagcag
gcctggcgggacaactcccccgggctgagccgcagctcaaatgaagtactgcccgtcggc
caccagccactagcggtaggcaacaattcctcctacctaggtggtcagggtgtcgtggga
gttccacggcagcagtcccctgcctcacaggcccagcaggcccagtcgcagcacagacat
cagcacccccactggaggcaggcgaccgcagcgccgctggaggtgacctacgaccaacca
cccaagtgcgagatcagtgggaaggaagccatttcagctctctccagagccaagagcaag
gagtgtcggcaacagatcgccgaggtgtactgcagacacaaggaagggcagttaatgcct
gagaaggtcactcgctactgccaccttgagggtaaagccaatgtgaatgtccagtgggac
gaggactctgctgagagtttcccattaaaaccagtgagaatagggttcgtcttggtggtc
cacggacgagccgctcgccagtttcaacgcctcttcaaagccatctaccacacctcgcac
tactactacatacacgttgatcagcgctccaacttcctgcacaggcaggtgcaggccttg
gctgcacagtatcccaatgtaagggtgacaccgtggcgcatggccaccatctggggcggt
gccagcctgctgaccatgtatcttcgcagcatggctgacctgctggccatgagggactgg
aactgggatttcttcatcaacctcagtgctgcggattatcccatcaggaccaataaccag
ctggtggccttcctgtccaaatacagagacatgaacttcatcaagtcacatggccgggac
aacgccaggtttatccgtaagcagggtctggatcgtctgttcttcgagtgcgacacccac
atgtggcggctgggcgatcgtaaaatcccagacggcatctcggtggacggcggctccgac
tggttcctgctcaaccgcatgttcgtggaatatgtcatgaactccaaggacgacctggtc
accaacatgaagcgattctacgcctacacactgctgcctgccgagtcgtttttccacacg
gtgctggagaacagcgcctactgtgacagcatggtggacaacaacctgcgcatcaccaac
tggaaccgtaaactgggctgtaagtgccagtacaagcacatcgtggactggtgtggatgc
tccccgaatgatttcaagcctgcagacttccaccgcttccagcaaactgtgcgacccacc
ttcttcgccaggaagtttgaagccagcgtgaaccaggagatagtgaaccagctggacacc
tacctgtttggaccatttccccagggaatgcaatcgctaaactcgtactgggagaacgtg
tacgacgagccagatggcgtggccagcctgtcggacacacagctcacgtacttccactcc
ttctctcgcctgggcctggccagggctgccgcctcgctacagggtaacccaaaggatcac
agctgcaggtacttccccatgggccacccggtgtcggtgcatctctactttcagtcggac
cagtttcagggctacctggtcaagcaccacgccaccaacctggccacgagcaagctggag
accatggagacctgggtggcgcccaagaagaacttcaagctgagcacccctgcgagcagc
acgttcagcaggttgcagttagcagagatcggtgcggagtgggatgccaaagagcgtatt
ttcagaaactttggcggcttaatggggcccatggatgagacggtgggcatgcagaagtgg
agcaaagggcccaacgtcaccgtcacggtcgtgtggatcgaccccaccaacgtcatcgcc
gccacctacgacattctgatcgacgccagcgccgagttcacccactaccgcccaccactg
aaccagcccctgcggccgggagtgtggagcgtgcgcatcctgcaccactggagccccgtg
gccgagatgaaattcctcattgccccgctgtcccatcacaaacaccagcccataagacaa
gaggaaactgtgaagctgcacaacgggccagcgaagaacagctacatggagcagagtttc
cacggcctcaacccggtgctcaacatccctgtcagcctgggctacgtggagcaggccaag
aggaacgcggcgctgaccgggccagagctcgagcattggttggacagcctggtgggcgag
ctgtgggaggcggccgacatctgtgccgtgggcccgacggcctgtcctgtcatgcagacc
tgctccaagatcccctggagctccctgagtccggaccccaaatcccagctcggagcaccg
cacgcagacgggcgtatcaggtag
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