Hippoglossus stenolepis (Pacific halibut): 118121507
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Entry
118121507 CDS
T08308
Symbol
gabra5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118121507 (gabra5)
04082 Neuroactive ligand signaling
118121507 (gabra5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118121507 (gabra5)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118121507 (gabra5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118121507
NCBI-ProteinID:
XP_035033320
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Position
14:complement(22723073..22749234)
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AA seq
469 aa
AA seq
DB search
MRGAEVPKEGMGDGMCYSFAMRRLWVCVLLASITCRLSLSQDVTGTPKEAELNDNITIFT
RILDGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLC
FKGPMERLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGTLLYTMRLTIS
AECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTQGAAKSVVVAEEGSRLNQYHLIGQ
TAGTEDIYTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPART
VFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWA
WDGKKAMEAQQPKKKDPLALSKKPNNTCSAGVNYTTNLTKDTSISTISNSTAVQLKPSET
KAPDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagcagaggtaccgaaagagggaatgggtgatggaatgtgctacagctttgca
atgaggcgtctgtgggtctgtgtcttgcttgcgagcatcacctgccgtctgagcctctcg
caggatgtaactggaactcccaaagaggcagaattaaacgacaacatcaccatcttcacc
cgcatcctggacggactgctggatggttatgacaacagactccgccccggactgggagaa
aaggtgacggagatcaaaaccaacatctttgtcacaagtttcggtccagtgtctgacact
gaaatggaatacactattgacgtatttttccgccaaagctggaaagatgagagactatgt
tttaaaggcccgatggagaggcttcccctgaataatctcctggccagtaacatctggacc
cccgacacctttttcctcaatggcaagaaatccatcgcccataacatgacgacacccaac
aaactgctgcggctccaagacgacggaacgctcctctacaccatgagactgacgatatca
gcagaatgccccatgcagctggaggacttcccaatggacgcccatgcttgtccccttaaa
tttggaagctatgcttatccagtgtcagaggtggtctacacgtggacacagggagcagcc
aaatcggtggtggtggcagaggaagggtctcggctcaatcagtaccatctgattggtcag
actgccgggacggaggacatctacaccagccgaggtcaatacaccgtgatgatggctcac
ttttacctgaagaggaagatcggttactttgtcatccagacctacatgccttgcttcatg
accgtcatcttgtcccaggtttccttttggctcaacagggagtctgttccagcacggact
gtctttggtgtgaccacagtgctcactatgacaactctcagcatcagtgctcgaaactcg
ctgcctaaagtggcttatgctacagccatggactggttcatcgctgtctgctatgccttt
gtcttctctgcactcattgaatttgcaacagtcaactatttcaccaagaggagctgggcc
tgggatggaaaaaaggcaatggaagcccaacaacccaagaaaaaagaccctttggctctg
tctaaaaagccaaacaacacatgctcagccggtgtgaattataccaccaaccttacaaag
gacacatctatctccaccatttcaaatagtacagctgttcagctcaaaccctctgaaacc
aaggccccagaccccaaaaagacttacaacagcgtgagcaagattgacaagatgtccagg
atagtgttcccagtcctgtttgggactttcaaccttgtttactgggccacgtacctcaat
agagaaccagtaatcaaaggggctgtgtaa
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