Hippoglossus stenolepis (Pacific halibut): 118121518
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Entry
118121518 CDS
T08308
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118121518
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118121518
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118121518
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118121518
NCBI-ProteinID:
XP_035033346
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All DBs
Position
2:complement(7666721..7675589)
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AA seq
653 aa
AA seq
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MRGGSSYGDRGRDRGRDRPRFGATGGRGGPPPMKFGNPGERLRKKKWNMDELPKFEKNFY
TEHPEIQHISQYEMEEYRRKKEITIRGTGCPKAVTAFHQAQFPQYVMDVLMQQNFTEPTA
IQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQAYLERGDGPICLVLAPTREL
AQQVQQVAFDYGKTSRIKTTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEGGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDSVQ
INVGALELSANHNILQIVDVCMETEKDHKLFQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDIKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQFVESGR
GGGGGGGRMRYRGGNSSNPNLMFHDECERRMRPGGGGGGSSSKDGRSGFSRDNRNSRDGD
RSNSSSSSSFRDRGDRRNSFNSGSEQYQSYSGSSGYNSRPNTQSAGSGSQDQSGQPQGQF
GQPPPPPVPTGGPLPLMAQQFALQQPPLLGFMGQPPYPFASPPPPPGPQPPRK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggctcgtcttatggagacaggggcagagaccgcgggcgagacaggccacgg
tttggggccacgggtggtcgaggtggacccccacccatgaagtttgggaatccaggagag
cgtctccgcaagaagaagtggaacatggacgagctgccaaaatttgagaagaatttctat
actgaacaccctgagatccaacacattagtcagtatgaaatggaagagtatcgcaggaag
aaggagatcaccatcagaggcactggctgtccaaaagctgtcaccgctttccaccaggcg
cagtttcctcagtatgtgatggatgtgctgatgcagcagaactttacggagcccacagcg
atccagtctcagggcttccctttggccctgagcggcagggacatggtgggaatcgctcag
actggctctggaaagacactggcttatctcctccctgctattgtgcacatcaaccatcag
gcctatctggagaggggagatggaccgatttgtctggtgctggccccgaccagagagctg
gctcagcaggtccagcaggttgcattcgactatggcaagacctctcgcatcaaaaccacc
tgtgtctatggcggagcacccaaaggaccacagataagagacctcgagaggggtgttgag
atctgcatcgccacacctggccgtctcattgacttcctggagggggggaagactaacctg
cgtcgctgcacctacctcgtgctggatgaggcggaccgcatgttggacatgggctttgag
ccacaaattcgcaagatagttgatcaaatcaggcccgacagacagacgctgatgtggagt
gcgacatggccgaaggacgttcggcagcttgctgaggacttcctgagggactctgtgcag
attaatgttggcgctctggaactcagcgccaaccacaacatcctgcagatagttgatgtc
tgcatggagactgaaaaggaccacaaactttttcagctcatggaggaaattatggctgaa
aaggaaaacaaaaccatcatctttgtggagaccaagaagcgttgtgatgatctcaccagg
agaatgaggcgggacggatggccagctatgtgtattcatggagacaagagccagccagaa
agagattgggttctcacagaatttcgtagtggaaaagctcccatactgatcgctactgat
gttgcctctcgtggtctggacgtggaagacatcaagttcgtcatcaactacgattaccca
aactcctctgaggattacgtccaccgcatcggacgtacagcccgcagtaccaacaagggc
actgcctacacctttttcaccccggggaacctgcggcaggcccgagaccttgtgcgggtg
ttggcggaggcccgacaggccatcaacccaaaactgcttcaatttgtggaatcaggccgt
ggtggaggtggaggcggtggcagaatgcgttaccgtggcggcaactccagcaaccccaac
ctaatgttccacgacgagtgtgagcgccgcatgcgtccgggtggaggcggcggcggcagc
agcagcaaagatggacgcagcggtttcagtcgtgacaaccgcaacagccgtgatggagac
cgctccaattcctcctcctcttcctccttcagggacagaggtgatcgcaggaacagcttc
aactcggggtcagagcagtaccagagttacagcggcagcagtggctacaactcccgtccc
aacacccaatcagcaggcagtggaagtcaggatcagtcaggtcagccgcaaggtcagttt
ggccagcctccccctcctcctgtgccaacaggggggccactgcccctcatggcgcagcag
tttgctctgcaacagcccccgctattgggcttcatggggcagccgccgtacccttttgcc
tctccgcctcctcctccaggccctcaaccgcccaggaagtag
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