Hippoglossus stenolepis (Pacific halibut): 118121535
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Entry
118121535 CDS
T08308
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03460
Fanconi anemia pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118121535 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118121535 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118121535 (her6)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118121535 (her6)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
118121535 (her6)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
118121535 (her6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
118121535
NCBI-ProteinID:
XP_035033387
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All DBs
Position
14:complement(11767064..11768935)
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AA seq
275 aa
AA seq
DB search
MPSDMMEKSSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQLPSSAGPTHPSFGQSM
VQIPNSSPQVLPMNAVSCKGGSSPVSLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNVNTSVPAAVSPGAPSGNSDSVWRPW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgacatgatggaaaaatcctcctcctccccggtcgctgcgaccccggcaagc
atgaacacaacccccgataaacccaagacagcgtctgagcacagaaagtcatccaagcca
attatggaaaagaggagaagagccagaatcaacgagagtttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctccagacactcgaagctggaaaaggcggacatc
cttgagatgacagtgaagcacctccggaacctccaaagggctcaaatgaccgctgccctg
aacacagaccccactgtgcttggaaaatatcgtgccggcttcagcgagtgcatgaatgaa
gtcacccggttcctgtccacctgcgaaggcgtcaacaccgaggtcaggacgcggttgctc
ggtcacctggccaactgcatgacccagatcaacgccatgaactatcccagccagcatcag
caccagcaccagctcccctccagcgccggacccacgcacccgtctttcggccagtcgatg
gtccagatccccaattcgtctccgcaggtcctgcccatgaacgcggtgtcctgtaaagga
ggctcctcgcccgtcagtttaccatcagacgccaccaaagtgtacggaggcttccagatc
gtgcctgccacagacggacagtttgcattcctcatacccaacgcggcgttcgcgcccaat
ggccccgtcatcccggtgtacgcgaacaacgtcaacacgtcggtgccggctgcggtttcc
cccggagctccatcaggcaactcggactcagtgtggagaccctggtga
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