Hippoglossus stenolepis (Pacific halibut): 118121550
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Entry
118121550 CDS
T08308
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118121550 (ddx49)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118121550 (ddx49)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
90S particles
Helicases
118121550 (ddx49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
118121550
NCBI-ProteinID:
XP_035033411
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All DBs
Position
14:8799105..8805306
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AA seq
479 aa
AA seq
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MADFSSLGLSDWLIKQCHQLGINKPTPVQENCLPPILQGRDCMGCAKTGSGKTAAFVLPV
LQKLSEDPYGIYCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVAQALELSDK
PHVVVATPGRLADHIRSSNTFSMSKIQFLIMDEADRLLEQGCTDFTKDLEVILGILPAKR
QTLLFSATLTDTLQELKGIAMNRPYFWESTSETRTVEELDQRFILTAEKVKDSYLVHLIQ
TFTDEHDDWSIIVFTNTCKNCQILTMMLREFHFPTISLHSMMKQKQRFANLAKFKASVYK
ILIATDVASRGLDIPTVQVVINHNTPGLPKTYIHRVGRTARAGRNGVSITLVTQYDIHLV
NAIEEQNHTKLKEYPVEEKEVLQILTQVNVTRRRCEIKLETSDFDEKKEINKRKQLILEG
KDPDMEAKRKAELEKIRTQKRRFKQKIQESIQRQKHGHLKKKLTKTKHTEKKKAPQATA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttctcgtcgctgggactgtcagactggctcattaaacagtgtcaccagctg
ggaatcaacaaacccactccggtgcaggaaaactgtctgccacccatcctccagggtcgg
gactgtatgggctgcgccaagactggcagtgggaagacggctgcatttgtgctcccagta
ctgcagaaactgtcagaggacccatatggtatctactgcctggtgctcactcctaccagg
gagctggcctatcagatcgctgagcagttccgagtcttggggaaacctctgggtcttaag
gactgcatcgtcgtaggaggaatggacatggtggcccaggccctggagctgtccgacaag
ccgcacgtggtcgtagcgacgccgggtcgactggctgatcacatccgcagctccaacacc
ttcagcatgagcaagatccagttcttgattatggatgaggcggaccggctgttagaacag
ggctgcactgacttcaccaaagacctggaggtgatcctggggattttaccggccaaacgt
cagacgctgctgttcagcgccacgctcactgacacattgcaggagctgaagggcatcgcc
atgaacagaccgtacttctgggagagcacatcagagacgcggacggtggaggagctggac
cagaggttcatcctcactgcagagaaggtgaaggactcctacctggtgcacctgatccag
acgttcactgacgagcacgacgactggtccatcatcgtcttcaccaacacgtgcaagaat
tgccaaatcctcaccatgatgctgcgggaatttcactttccaacgatctccctgcactcc
atgatgaagcagaaacaacgttttgcaaacctcgccaagttcaaggccagcgtctacaaa
atcctgattgcgacagatgtggcttccaggggtttggatattccaactgtccaggtcgtc
attaaccacaacacccccggccttcccaagacctacatccacagagtcgggcgaacagca
agagcaggcaggaacggagtgtccatcactctggtgacacagtatgacatccacctcgtc
aacgccatcgaagagcagaaccatacaaagctgaaggagtaccctgtggaggagaaggaa
gtcctgcagatcctcacccaggtcaatgtgaccaggcgacgctgtgaaataaaactggag
acatccgactttgatgagaaaaaggagatcaataagcggaaacagctgatcctggagggg
aaggatccagacatggaggccaagaggaaggccgagctggagaagatcaggacacagaag
aggaggttcaaacagaaaatccaggagagcatccagagacagaaacatggacacctgaaa
aagaaactgacaaagacaaaacacactgaaaaaaaaaaagctccacaggcaacagcgtga
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