Hippoglossus stenolepis (Pacific halibut): 118121575
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Entry
118121575 CDS
T08308
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118121575 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
118121575 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_EndoS
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
118121575
NCBI-ProteinID:
XP_035033456
LinkDB
All DBs
Position
14:complement(5384770..5445297)
Genome browser
AA seq
1717 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLRELWMDNNSLQSIPGSLG
KLRQLRYLDLAKNRIESLDTDVSGCECLEDLLLSSNMLQQLPDSIGMLKKLTTLKVDDNQ
LNSLPNTIGSAKPKHGLSLLEELDCSCNELESLPPTIGYLHNLRTFAADENFLSELPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFAKLKDLAALWLSDN
QSKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
DFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKNVHAGHGHQHQHQHQ
HQHQHPHQHPHQHQLSTGTATSAGTNMEHTHLSKEPYEPPWPLPPKEVTDREMQDFSQAQ
LMDQGSMHNSGIDIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLL
GKDKKESTDEEMDKLHCLNHSGSSATYSDYSPSQGSSGSSNPPANAHSHQHSHTHAHPHP
HPHPHAHPHPHPHPHPHPQLPHNQTHPPVLPAPSKDQAPQTHWTNRLAQSFPKPIDSKPL
LSQRETPPSGTLQQRGDRRPLSEPFDWAEAPHYDNTGFDAEESPLDPSSGTSQGNPSLGS
KPRSQSTHGRRPLLRQERIVGVPLELDTQTLPYHSNQRPPQDNDPQSSAHSQNPWQNWTR
TPSPLEDRTAFPSKLDLTPTSSPNPDRKDRLDQGGGGLPGSWTYHDNQGEQNRKDQLSVS
GGNKVTVVMSKSSDRLSPMMKETRSKFKKSQSIDEIDIGSYKVYSIPMDSYSSSIEQQTS
LDRQDLPGSMEQTNMSRSQSAPMLDDELGFSGQNQKPAIPHKAYHFDQNYNPQVTMDRRV
PPPFPNTPDYVNHASKALEYINQPGKTLPKELVSPRYRAYPPLEMFSFPQSPISPDGPPS
QQQQPIPTQRSRPGFLRRADSLVSSTELALFRRVHEAQQEALQEAQYRQQADPPLYSRAL
AYSSPMDHSALTNMVDSQGQMMHNKRNGRYDDDYPTYQEQKKPMIGYPTKSLTQRRPLSA
RSYSTETYGASQARPVSARPTMAALLEKMPPDYTLATCPEKPLDDTIKVRPGVPLKPEDI
TSKMPADWRQQLLRHIEAKRLDRSGVLKHNTLTLGMLCQGHSQGRSSTLNFNLYNNTKHE
PPAGRWLPLPPPPSANATPSQQAAMLDNDQEGVSGSNQWAPYSLGRRDVPPDNLMKKSAH
SHNTSHQSHNTMIVTSSSSSSSTTPHRVVGPQGYDGMMSKGNQYQPGMPLSVVPSGGPGQ
YQGNMSQGLPSPGQSYSSSGLPMALSPSGNQPQYNPHSSHSSHQSSLPATNPQYHGNQGM
VHSNQGMVHSNQGMVHSNQGMVHSNQGMVHSNQVIMSTHTNPRPQSARCLLQTKGQKSTD
GFQEQMCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVTRVQHDGPATSALQPGDKIL
QANGHSFLHMEHETAVSLLKSFQRTVDLVVLRDSSMC
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggataactactccactttgcaactgcagtgtctggaaatgaccacgaagcggaagctg
attggccggctggtgccgtgccgttgtttccgtggcgaggaggaagtgatctcggtgctg
gactactctcactgcagcctgcagcaggtccccaaagaaatcttcagcttcgagagaact
ctggaggagctctacctcgacgccaaccagatcgaggaactacccaagcaactctttaac
tgccaggccttgaagaagctgagcatgcccgacaacgacctgtccaacctgcccaccacc
atcgccagcctggtcaacctcaaagagctggacatcagtaaaaatggtatccaggagttt
ccagacaatatcaaatgctgtaaaggtctgtctgtggtggaggccagtgtcaaccctatc
accaaactccccgatggtttcacgcagctcctgaatctgacccagctcttcttaaacgat
gccttcctggagtatctgccggcgaactttggcagactctccaaactacggatcctggag
ctgagagagaaccacctgaaaaccatgccaaagtctatccacagactgacacagttggaa
aggttggatctgggtagcaacgaattctctgaagtgccagaggtgttggagcaaatccac
aacttaagggagctgtggatggacaacaactctctacagtctataccagggtcgttaggg
aagctccgtcagttgcgatacctggacttagctaagaatcgaattgagtcgttggacacg
gatgtttcaggctgcgagtgcttagaggacctgctgctgtcctccaacatgctgcagcaa
ctccctgactctataggaatgttgaagaagctgacaacactgaaggtggatgacaaccag
ctgaactcactgcctaacaccatcgggagtgcgaagcccaagcacggtctgtctctgttg
gaggagttggactgtagttgtaatgagttggagtcgttgcctcccaccatcgggtacctg
cacaacctgaggaccttcgctgccgacgagaacttcctctcagagctgccccgggagatc
ggtaactgtaagaacgtgacggtaatgtcgctgcggtccaacaaactggagtttctacct
gacgagatcggacagatgaccaaactacgagttcttaatctgagtgacaacaggttaaag
aatctaccgtttaccttcgctaagctgaaggacctggcagctctgtggctttctgacaat
cagtccaaggctctgatccctctgcagacagaagcccacccagaaaccaaacagaaggtt
ttgaccaactacatgtttcctcagcaaccacgacatgatgaggattaccagtcggacagt
gacagcttcaatcccaccctgtgggaggagcagaggcagcagaggatgaccgtggctttc
gacttcgaggacaagaaagaagaggaggacaactctgggaaggtcaaggtggagatcaac
ctgaagcgctacccaacaccttaccctgaggacctgaagaacatggtcaagtcagtgcaa
agccttgtgggtaaaaacgtacacgccggacacgggcaccagcaccagcaccagcatcag
caccagcaccagcacccgcaccagcacccgcaccagcaccagctgagcacaggcactgcc
acctcggcaggaaccaacatggaacacacgcacctcagcaaagaaccgtacgagccaccg
tggccgctaccacctaaagaggtgacggacagagagatgcaggacttctctcaggctcag
ctcatggatcagggatcaatgcataactccggcatcgacattcccaagaggaaagacaaa
gaggatctgacagagagctcagaggactcgatgggcggctcccccaacgacatccgcatc
tctgacatgaggcccacgctggtggagccgcccatgtacaaaccaaaggtggtgctgctg
ggcaaagacaagaaagaatctaccgatgaggagatggataagctccactgtctgaaccac
agcggctcctcggccacctactccgactactccccctcacagggctcctcgggctcctcc
aaccctcccgccaacgcacattcgcaccaacactctcacacacacgcacaccctcacccg
cacccacacccgcacgcacaccctcacccgcacccccacccgcacccgcatccgcagctc
ccgcacaatcaaactcaccctcccgtcctgccggcccccagcaaggaccaggccccccag
acacactggaccaacagactggctcaatcgttccccaagcccattgattccaagcccctg
ctatctcagagagaaacccctccatcgggaaccctgcagcagcgtggggatcgacgcccg
ctcagcgagcctttcgactgggctgaggctcctcactacgacaacacaggtttcgatgcc
gaggagtctcctctggacccttcgtccgggacaagtcagggaaacccttcgctgggctcc
aagccccgcagccagtcgacacatgggcgccgcccgctcctcaggcaagagagaattgta
ggagttcctctggagctggacacccagacgctgccctaccacagcaaccaacgtcccccc
caagacaatgacccgcaatcctccgcacattcccagaatccttggcagaattggacccga
actccgagcccgctggaggacaggaccgcctttccatccaagctggacctgacacccacc
tccagcccaaaccccgaccgtaaggataggctggaccaaggaggagggggtttgcctggc
agctggacgtaccacgacaatcagggcgagcagaacaggaaggatcagctcagcgtcagc
gggggcaacaaggtgacggtggtgatgagcaaaagctcggaccgcctgtcccccatgatg
aaagagacgaggtccaagttcaagaagtcacaaagcattgatgagattgatattggctcc
tataaggtctacagtattcccatggacagctacagttcatccatcgagcagcagaccagt
ttggaccgtcaggatctacccgggtctatggagcagaccaacatgtcccgatcacaatcg
gcccccatgttagatgatgagctgggcttctccggacaaaaccaaaaacctgccatccca
cataaagcctaccacttcgaccagaactacaatccccaggtgaccatggaccgtcgggtc
cctcctcccttccccaacacaccggattacgtcaaccacgcatccaaggccttggagtac
ataaaccagccagggaagacgttaccgaaggagctggtgagccctcggtatcgtgcgtat
ccgccgctggagatgttttctttcccccagtcgccaatcagcccggacggaccgcccagc
cagcagcagcagccaatcccaacgcagcgctccaggccagggtttctgaggagagcggat
tcgctggtgagctccacagagctcgccttgttccgcagagtccatgaagcccagcaggag
gcgctgcaggaggctcagtacagacagcaggcggacccccctctttacagtcgggctctt
gcctactccagccccatggaccactcggctctcaccaacatggtcgacagccagggccag
atgatgcacaacaagagaaatggtcgctatgatgacgactatcccacctaccaggagcag
aagaagcccatgattggttacccgacaaagagcctgactcagcgacgccccctgtctgcc
aggagctatagcactgagacctacggagcatctcaggcccgtccagtgtcagctcgtccc
accatggccgccctgctggagaagatgccccctgactacaccctggcaacttgccccgag
aaaccactagacgacaccatcaaagttagacctggggtgccactgaaacccgaagacatc
acctccaagatgcctgcagactggaggcaacagctactcaggcacatagaggccaagcga
ttggacaggagtggtgtcctaaagcacaacacgctcacgctgggcatgctctgtcagggt
cacagccaggggcgcagcagcactttgaactttaacctttacaataacactaagcatgag
ccccctgctggccgctggctgccactgcctcctcctccgtctgctaacgccaccccctct
cagcaagccgccatgctggataatgaccaggagggggtgtcagggagcaaccagtgggct
ccttactcacttggcaggagagacgtcccccccgacaacctcatgaaaaagagcgcccac
tcccacaacacgtcccaccaatcacacaacaccatgatcgtaacttcctcttcctcctcc
tcctccaccacgcctcaccgcgtggtcgggccgcagggttacgacgggatgatgagtaag
ggaaaccagtaccaaccagggatgcccctgtcagtggttccctctggggggcctgggcag
taccaaggcaacatgtctcaaggcctcccctcccctggtcagtcatactccagcagcggc
ctgcccatggccctgtccccgtccgggaaccagccccagtacaacccccactcctcccac
agctcccatcagtcctccttgcccgccacaaacccccagtaccacggcaaccagggcatg
gtccacagcaaccagggcatggtccacagcaaccagggcatggtccacagcaaccagggc
atggtccacagcaaccagggcatggtccatagcaaccaggtcatcatgtccacccacacc
aacccgcggcctcagagcgctcgctgcctgttgcagactaaagggcagaagagcacggat
ggtttccaggaacagatgtgtgtgagaatagagaagaaccctggtcttggtttcagtatc
tctggtggcatcagtggccaggggaaccccttcaagccctccgacatgggtatctttgtt
actagggtacagcatgacgggcccgccacctccgccctgcagcctggagacaagatactg
caggctaacggacatagttttttacacatggagcatgagacagccgtctctctgctgaag
agtttccagcggacggtggacttggtggttctgagagacagcagcatgtgctaa
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integrated database retrieval system
