Hippoglossus stenolepis (Pacific halibut): 118121578
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Entry
118121578 CDS
T08308
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03030
DNA replication
hsp03410
Base excision repair
hsp03420
Nucleotide excision repair
hsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118121578 (rfc4)
03410 Base excision repair
118121578 (rfc4)
03420 Nucleotide excision repair
118121578 (rfc4)
03430 Mismatch repair
118121578 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsp03032
]
118121578 (rfc4)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118121578 (rfc4)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118121578 (rfc4)
DNA replication proteins [BR:
hsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118121578 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
118121578 (rfc4)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118121578 (rfc4)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118121578 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
118121578 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_16
AAA_assoc_2
AAA_22
AAA_30
AAA_11
Gp44_lid
AAA_24
DUF815
Mg_chelatase
AAA_19
SLFN-g3_helicase
AAA_28
AAA_14
RuvB_N
AAA_5
DNAX_ATPase_lid
ResIII
Cdc6_lid
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
118121578
NCBI-ProteinID:
XP_035033467
LinkDB
All DBs
Position
14:26730421..26739355
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQTTRPQKDKSASGPSTEKKAKAIPWVEKYRPKSVDEVAFQDEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRKDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKQSRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLAICDKENLKFTKQSIAALVRVSEGDLRKAITFL
QSAARLGVGKEITEKAITDIAGVVPPKMIDNLLQICFKGTFEKLEIAVRDMVDEGYAATQ
ILGQLHESIIEQDLNDKQKSAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQQSSQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcaactgttcaaactaccagaccccagaaagacaagtcg
gcatcggggcccagtacagagaagaaagccaaggctattccatgggtagaaaaatacagg
cctaagtctgttgatgaggtggcctttcaggacgaggtggtggcagtgctgaagaagtct
ctggaaggagctgatcttcccaacttactgttctatggtcctcctggaacaggaaagacc
tccaccatcttagctgctgccagagaactatatggtcctgagctatacagacagagggtg
ttggagctcaacgcctcagatgagcgaggcatccaggttgtcagagagaaggttaagaac
ttcgctcagctcactgtggctgggactcgtaaagatgggaagccatgtcctccttttaaa
ataatcatcctggacgaagcagactccatgacagcaccagctcaggccgctctcagacga
accatggagaagcaatcgcgcaccacccgcttctgtctcatctgtaactacatcagcagg
attattgagcctttgacgtccagatgttccaagtttcgcttcaaacctttagccaatcag
atacaagaagaacgcctgctggctatctgtgacaaggagaacctcaagttcaccaaacag
agtatagcagcattggtgagggtgtctgagggagacctgcggaaagccatcaccttcctc
cagagcgctgcacgcctcggcgtcggcaaagagatcacagagaaggctatcactgacata
gccggggtcgttcctccaaagatgatcgacaacttgctccagatttgcttcaaaggaaca
tttgagaaactagagattgctgtcagggacatggtggatgaaggctacgcagccacacag
attctgggtcagctccatgagtcgatcatagaacaggacctgaacgacaagcagaagtcg
gccatcacagagaagatggcggttgtgagtaagtgcctgtcagatggtgcagatgagtac
ctgcagatgttgagtctctgttcagtcatcatgcagcagtcctcccagaacaactaa
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integrated database retrieval system
