Hippoglossus stenolepis (Pacific halibut): 118121598
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Entry
118121598 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
hsp04210
Apoptosis
hsp04517
IgSF CAM signaling
hsp04530
Tight junction
hsp04540
Gap junction
hsp04814
Motor proteins
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118121598
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118121598
09143 Cell growth and death
04210 Apoptosis
118121598
09144 Cellular community - eukaryotes
04530 Tight junction
118121598
04540 Gap junction
118121598
09142 Cell motility
04814 Motor proteins
118121598
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118121598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118121598
03036 Chromosome and associated proteins [BR:
hsp03036
]
118121598
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118121598
04147 Exosome [BR:
hsp04147
]
118121598
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118121598
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
118121598
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
118121598
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118121598
Exosomal proteins of other body fluids (saliva and urine)
118121598
Exosomal proteins of colorectal cancer cells
118121598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
118121598
NCBI-ProteinID:
XP_035033499
LinkDB
All DBs
Position
14:7532338..7534640
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSNKTIGGGDDSFSTFFSETGAXK
HVPRAVFVDLEPTVIDEVRTGSYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIEHPSYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPVISAEKAYHEQLTVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIGTIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAAAFVHWYVGEGMEEGEFSEA
REDMAALEKDYEEVGADSLGEDDEEEGDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccgtgcacgttggtcaggccggtgtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagcaacaag
accattggaggaggagatgactccttcagcaccttcttcagtgagaccggagctnggaag
cacgtccccagagctgtttttgtcgacctggagcccactgtcatcgatgaagtacgcact
ggaagctaccgccagctgttccaccctgagcagctgatcactggtaaagaggatgctgcc
aacaactacgcccgtggacactacaccattggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcactggtcttcaaggcttcctggttttccacagc
ttcggaggtggcaccggctctggcttcacctcactgctgatggagcgtctgtccgtcgac
tacggtaagaagtccaagctggagttctccatctacccagccccccaggtgtccaccgct
gtggtggagccctacaatgccatcctgaccacccacaccaccctggagcactccgactgt
gccttcatggtagataacgaggccatctacgatatctgccgcaggaacctcgatatcgag
catccctcctacaccaacctgaacaggttgatgagtcagattgtgtcctccatcactgct
tccctccgtttcgatggtgccctcaatgttgatctgaccgagttccagaccaacttggtg
ccatatccccgtatccacttccctatggccacctacgctccggtcatctctgctgagaag
gcctaccatgagcaattaacggtgtctgagatcacaaatgcctgcttcgagccagccaat
cagatggtgaaatgtgaccctcgccacggtaaatacatggcctgctgcctcctgtaccgt
ggagatgtggtgcccaaagatgtcaacgctgccatcggcaccatcaagaccaaacgcacc
atccagtttgtggactggtgccccactggtttcaaggtcggcatcaactaccagccgccc
actgtggttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggctcgccttgaccacaagtttgatctgatgtacgca
gctgccttcgttcactggtatgtgggtgagggtatggaggagggagagttctctgaggcc
agagaggatatggcagctctggagaaagattacgaagaggtcggagctgatagtttggga
gaggatgatgaggaggaaggggattattaa
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