Hippoglossus stenolepis (Pacific halibut): 118121620
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Entry
118121620 CDS
T08308
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
118121620
Domain-containing proteins not elsewhere classified [BR:
hsp04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
118121620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
PMP1_2
Motif
Other DBs
NCBI-GeneID:
118121620
NCBI-ProteinID:
XP_035033545
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All DBs
Position
14:complement(5165335..5237582)
Genome browser
AA seq
1321 aa
AA seq
DB search
MPAGSQGVAGITAFIGSWLLLLLGSCGTGAQEACDSPLVSSLPPSSFRSSSQLSSSHGPV
FAKVNRREGAGGWSPLVSDRYQWLEVDLERRTQITAVATQGRYGSSDWLTAYLLMFSDTG
HNWRQHRQEDSLGAFPGNSNADTVVQYKLDQPVIARYLRLVPLDWNPTGRIGLRLEAYGC
RYTSDVANFDGSSSLVFRLSARPSRTATETIALKFKTMRNSGTLLHAEGQRDHSLTLVLE
KGRLLLYHQQDVSSSSGGQLLVSLGSLLDDQHWHRVKLERLSTHVNLTVDKNTQQVHVPA
ELSHWEIRQLSVGAVQSHGLQKPILSNRNFHGCLENLLYNELNLIDLTKQNNQQVTALGN
VTFSCAEPVSVAVTFTDSQSFLQLPGLTSWSSGVVAVALQFRTWNKAGLLLTFDLPQLES
TVWLYLRETRLRLQISKVGRATLELSAGSGLNDGQWHSVEMISREDCLSITVDKDEGATA
HTSVPLPLTTATQLFFGGCPAQPNSRECTNPFTTFQGCMRLLTLDDQTVDLIKVQQRLLG
NYSHLQIDMCGIIDRCSPSHCEHGGRCTQSWSNFHCNCSTSGYRGATCHSSTYEQSCEAY
KHRGNTSGHYYIDVDGSGPIKPQLVHCNMTEDRAWMVIQHNDTELSRVHSSPERNQYSAH
FDYYDSEEEQLLAIIGQSEHCEQELSYHCRKSRLLNTPEGAPFSWWVGGPGAGQIQTYWA
GAPPGSRQCACGLQDACLDSHHYCNCDADYDQWANDSGLLTHKESLPVRSLVLGDVQRPG
SEAAYRVGPLRCHGDRNFWNAAFFDRETSYLHFPTFHGELNADVSFLFKTTSSSGVFLEN
LGIKDFIRIELSSSSEVVFSFDVGNGPLEVRVKTSVPLHDDRWHSVRAERNVKEASLRVD
GFPAATQEAPADGHIHLQLNSQLFIGGTASRQKGFRGCIRSLQLNGVTLDLEERAKITPG
VRPGCPGHCSSYGSLCQNRGRCVERTNGFSCDCGPSAFTGAFCHKEVSASFTSSMSITYI
LKEPYELSSSNSSNSSSSAPSPSIFSDMTPRGENISLSFRTLQSPALLLYVHSFHKEYLA
LLINEHDELELRYKLHGSRDVEVLGSRVVNLADGRLHTVTIGRLADAVSVQIDQNAREDF
NLSSDAEFNSIRSLILGRVQESDELDAELAEVAALGFTGCLSAVRFNSVSPLKAALLHPD
GDAVVTGPLVQSSCGSSSPAKSYTAETTHSLSDQPGSVDPGQPLVNAIRSDSALIGGVIA
VVIFVAVSALAIVVRFICSRKETYRNQEVKAAQPDDGQELPFSSPADSQGAASENQKEYF
I
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggggagtcaaggagtcgctgggattactgcgtttatcggctcctggctgctg
ctgctgctcggctcctgtgggacaggtgcgcaagaagcatgtgacagcccactggtgtcc
agtttgcctccatcctccttcagaagctcctcccagttgtccagcagccatggaccagtg
tttgctaaagtcaacaggagagaaggagccggaggttggtctcctctcgtctccgacaga
taccagtggctggaggtggacttggagaggcggacccaaatcactgccgtcgccacgcag
ggacgatacggcagctctgattggctgacagcctacctgttgatgttcagcgacacggga
cacaactggagacaacaccgacaggaggacagcttaggggcgttcccaggtaacagcaat
gcagacacggtggttcagtacaaactggatcagcccgtcatcgctcgatacctgcgcctg
gtcccacttgactggaaccccaccggacggattggactcagactggaagcatatggatgt
cgatacacttctgacgtggcaaacttcgacggcagcagcagcctggtcttcaggctgagt
gctcggccgagccgcacagcgacggagacgatcgctctgaagtttaaaaccatgaggaat
tctgggacgctgctccacgccgagggacagagagatcacagcctcactctggtgctggag
aaaggacgactgctgctttatcaccaacaagatgtgagttcatcctccgggggtcagctc
cttgtttctctgggaagtctcctggacgaccagcactggcaccgtgtaaagctggagcgg
ctcagcactcacgtcaacctcactgtggataaaaacacgcagcaggttcacgtaccagcg
gagctcagccactgggagattcgccagctcagtgtcggagctgtgcagagccacgggctg
cagaaacccatcttgtccaacaggaatttccatggctgcctggaaaacctgctgtacaat
gagctcaaccttatagacctgacgaaacagaacaaccagcaggtcaccgcactgggcaat
gtgaccttttcttgtgctgagccagtctcggtcgccgtgacattcactgactcccaaagc
ttcctgcagctgcccggactgacgtcgtggtcgtcgggtgtggtcgctgtggcgctgcag
ttcaggacgtggaacaaagcggggctgctcctgacctttgacctcccgcagctggagagc
acagtctggttgtacctgagagagaccagactccgcctacagatcagtaaagtgggcagg
gccacactggagctcagtgcaggttcaggtctgaatgatggtcagtggcattcggtggag
atgatctccagagaagattgtctgagcatcacggtggacaaagacgaaggagccacggct
cacaccagcgtcccacttcctctaaccacggctactcaactcttcttcggtggttgtcct
gctcagccgaacagtcgggagtgtacgaaccctttcaccacgtttcagggctgcatgcgt
ctcctgactctggacgaccaaaccgtggacctgatcaaagtgcagcaaagactgctggga
aactacagccacttgcagatcgacatgtgcggcatcatcgacaggtgttctcccagtcac
tgtgaacacggaggtagatgcactcagtcctggagcaacttccactgcaactgctccacc
agcggctacagaggagccacctgccacagctcgacttatgagcagtcgtgtgaggcgtac
aaacacagaggcaacacatcgggacattattacattgacgttgacggcagtggaccaatc
aaaccccagctcgtccactgtaacatgacagaggacagggcgtggatggtgatccagcac
aacgacactgagctgagcagagttcactcgtctcccgagcgaaaccaatattcagcccac
ttcgattactatgattctgaggaggagcagctactcgccatcatcggccaatcggagcac
tgcgagcaggagctgtcgtaccactgcaggaagtcccgcctcctcaacacaccagagggg
gctccgttcagctggtgggtgggaggtccgggtgcaggtcagatccagacgtactgggct
ggagctccgccgggcagtcgtcagtgtgcctgtggtctgcaggacgcctgcctggattca
catcactactgcaactgtgacgctgactacgaccagtgggccaacgactcaggcctcctc
acccataaggagtctcttccggtgaggtctctggtgctgggtgacgtccagcgtcctggg
tcggaggccgcctacagggtgggaccgctccgttgtcatggagacaggaacttctggaac
gctgcgtttttcgacagggagacgtcttacctgcacttccccaccttccacggcgagctg
aacgcggacgtctccttcctgtttaaaaccacgtcctcctctggggtcttcctggaaaac
ctgggcatcaaggacttcatccgcatcgaactcagctcctcctccgaggtcgtcttctcc
ttcgacgttggcaacggtccactggaggtgcgagtgaagacgagcgtcccgctgcacgac
gaccggtggcacagcgtgcgagccgagcgaaacgtgaaggaggcgtcacttcgggtcgac
gggttcccggccgccacgcaggaggctcccgccgacgggcacatccatctgcagctgaac
agtcagttattcataggaggcactgcgtccagacagaaaggtttccgcggctgcatccgc
tctctgcagctgaacggcgtcaccctggacctggaggagagggcgaagatcacccccggg
gtccggcccggctgcccgggtcactgcagcagctacggctctctctgccagaaccggggt
cgctgtgtggagagaaccaacggtttctcttgtgactgcggtccgtccgccttcactgga
gccttctgccataaagaggtttctgccagcttcacgtcctcgatgtccatcacctacatc
ctcaaggagccgtacgagctgagcagcagcaacagcagcaacagcagcagcagcgctccg
tctccgtccatcttctccgacatgacgccgagaggagaaaacatctctctgagcttcagg
accctacagagtccggctctgctgctctacgtccactccttccacaaagaatacctggcg
ctgctgatcaacgaacacgatgagctggagctgaggtacaagctgcacggcagcagagat
gtggaggtgttgggcagcagagttgtgaacctggctgatggacgtctgcacacagtgacc
atcgggagactggcagacgctgtgtctgtgcagattgaccagaacgccagggaggacttc
aacttgtcgtctgacgcggaattcaacagcatcaggtcgctcatcctgggaagagtccag
gagtctgatgagctggacgcggagctggctgaggtggccgccctcggcttcaccggctgt
ctgtcagcggttcgctttaactccgtcagtcccctgaaagccgctctgctgcatcctgac
ggggacgccgtcgtcaccgggccgctggtccagtccagctgtggatcctcctccccagcc
aagtcctacacggcagaaaccacacactccctgtcagatcaacctggttcagtggatcca
ggtcaacctttagtcaacgctatcaggagtgactcggctctaattggaggggtgatcgcc
gtggtgatatttgtcgccgtgtctgcgttggcaatcgtggtcagattcatctgcagcaga
aaagagacgtatcgaaaccaggaggtcaaagcggcgcagcccgacgacggccaggagctc
cccttcagcagcccggcggactctcagggcgccgccagtgaaaaccagaaggagtatttc
atttag
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