Hippoglossus stenolepis (Pacific halibut): 118121677
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Entry
118121677 CDS
T08308
Name
(RefSeq) clustered mitochondria protein homolog isoform X1
KO
K03255
protein TIF31
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hsp03012
]
118121677
Translation factors [BR:
hsp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118121677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
CLU_N
TPR_NPHP3
GSKIP_dom
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
118121677
NCBI-ProteinID:
XP_035033613
LinkDB
All DBs
Position
15:complement(19059364..19072148)
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AA seq
1694 aa
AA seq
DB search
MGNIVQCCHTLSHYFKCKDTAGQDEAERSPLLSSEESECCDDLEDDLLTVSAGVTNPSLE
PEHFLFPDIILSSSMGGDMTLVEPMVCLLVSEEEEGRGEGVSRVFDPGQERSIMRRNRGF
SEVETQTEMETQIGMGVQTQTETQAEVQTQTEMFVCLRSEDVEEKHEILQKVETSRGRHS
ENLYNLPSEKASEQMLGSETWSDIFIGLEESGKVEEHSERNKLSFRDLHEEAKEEEVKIC
ILQTEQYTELQEENTEEADVLKVQQKDTVGEEHAEFTWTEADVKDKGVSVQSECTSVMPA
EHDANNTEEKESQRKPTFDPAGCHVDPTQESGQDDEQMSERSHQNVNEKDLNTKTEMNLF
EDDTDHSTDRLKEEHVECQENPPEREEDEAESSGLQEAVETDLTQEEEEGAERKKLTLFL
VDRLFLAAPHVKAAPPLQNAESPEEAGVEQCDPDKKEQLSIRDIVDLQETGCTVRIQPPG
TESLELQVSGQMLVAELHQVLMDHEVTCHRTRFSLQLGGTALDNLTELSCIQGLQDGALI
KLVEDCYTVRDARLHLRHVCDLLRSLDPADAYNGVNGSSLSYLTFYTRGDKDGENVGKRR
VSEKESVDHRPPEFILPGCKERPLLPLQPVRDDWKPLQCLRVLTMSSWNPPPGNRKMHGD
LMYLNALTMEDRELNITSSTRGFYLNQSTAFNFNPKPAAPKIHCHSLVELLNHVSPAFRK
NFSALQKRRVQLHPYERFAAPFQVFTWAAPHGEHTLDCVRAEETHASHMGQDKHTAGQSR
DWNEELQGCRELPRKSLQERLHRERSVFKTNSDFVAAATQGAVAVIDGNVMPINPSEAPH
MQMFIWNNIFLSLGFDISEHYRPLGGNTAAHAAATCDLRGAQAYASVDTDGLHTLGTAVV
DYRGVRVIAQTIVPGILEKSQEQSLVYGSNDYGATVFTHPRFLELLDKTCKPLRIQRHQV
LNHDNIPVELCSGIETKGILGNDGRPYILDLLRTVPPDLNFQFSETASETREMREMVEEV
PEECRSLGYPREHRHSLASLRPELKEAFVQQRYELYVKMVAQGLSQLEDQDKATEQSEED
LVCEPRTGDTTTAADAMESQRRDVMTKACQAVGSVSDTRFDIRFNPDVCSPGVRFSAESV
EDVQRQRKLLWDAAAFLLSNQIPAVLRDCLDHTAVPMDGGTLTSVLHQQGVNVRYLGTLL
GELHRVEERGRLGHIKRLAVSEVIIRSAKHIFRTFLQDVEPAAFSAAVSHFLNCLLSSSS
CTPDSGSDELLSRRRSRRRRSHGSRVALLTDSVWARLTPSELWGRIRAEAGDYFNYMINS
DSIDEVIEKHGLQRISLLREIAIKMGIQVQLREYVFESRHRPVFGEEDVVNMFPVVKHLK
PTATDATRLVQRAQVAVQQGLLRDGYELISQALTLFSSVCGVLHEDVCVCLRLLGRLSYI
LGEYADALSHQEKVVMSSERLQGIDHPQTIQDYTHLGLYCFAGGQLSISLKLLYRARYLT
LLVSGEDHPQVALLDSMLGLVLHGLMEHELSLKFLQNALNLTSKYRGATSVRLAHSHHLL
ATVYETKGEFRSALQHEREAYTIYKSQVGENHDSTKESSEYLKSLTQQAVVLQKAINHFY
SDTPGACVPPLKFSSPSLQAIIQQLNLTCGIILIPLSAKDLADLRKGMKRQDKVQVEELE
NQLLKRRKDTGQQN
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagtgcagtgctgtcacactctgtcacactactttaagtgtaaggacaca
gcaggccaggacgaggcagaaagatcccccctgctgtccagcgaagagagtgaatgttgt
gacgacctggaggacgatctgttgaccgtctccgccggcgtgacgaacccatccctcgaa
ccagagcacttcctgttccccgacatcatcctgagcagcagcatgggaggggacatgacc
ctggtggagcccatggtgtgtctgctggtgtccgaggaggaagaggggcgaggggaggga
gtgagcagggtgtttgacccgggacaagagaggagcatcatgaggagaaacagggggttc
tctgaggtggagacgcagacggaaatggagacacagatcggtatgggggtgcagactcag
acagagactcaggcagaggttcagacacagacagagatgtttgtgtgtctgaggtctgag
gatgttgaggaaaaacacgaaatactgcagaaggtggaaacatcacgagggagacactca
gaaaatctctataatttgccatcagagaaagcgagtgaacagatgctgggatctgaaacc
tggtctgacatttttattgggttagaggagtcagggaaagtggaagaacattcagaaaga
aacaaactgtccttcagagatttacacgaggaagcaaaagaagaagaagtgaaaatctgt
atattacaaacagaacaatacactgagctacaagaggagaacactgaagaagcagatgtc
ttgaaggtgcagcagaaggatacggttggtgaggaacatgcagagtttacctggacagag
gcggatgtaaaagacaaaggagtaagtgttcaatcagagtgcacttcagtgatgccggct
gaacatgatgcaaacaacacggaggagaaggaatcacaaaggaagccgacctttgaccct
gcagggtgtcatgtagaccccacgcaggagagcgggcaggatgacgagcagatgagtgag
cgctcgcatcagaacgtaaacgaaaaggaccttaacacgaaaacagagatgaatctgttt
gaggacgacacagatcactcgacagatcgtttgaaggaagaacatgttgaatgtcaggaa
aacccaccggagagggaagaggacgaggccgagagttcaggtctgcaggaggctgtggag
acggatctgactcaggaggaggaggaaggagctgagaggaagaagttgaccttgttttta
gtcgacaggttgtttctggcagcaccgcatgtcaaagcagctcctcctcttcagaatgca
gaaagccccgaggaagctggtgtggaacaatgtgatcctgacaaaaaggaacaactcagc
atccgtgacatagttgatctccaagagacgggatgtactgtcagaatccagcctcctgga
acagagagtttggagctccaggtgtcaggccagatgttggtggccgagctgcaccaggtg
ctgatggatcacgaggtcacgtgccatcgcacacgtttctctctgcagctgggaggcacc
gcgctggacaacctcacagagctgagctgcatccagggccttcaggacggagcgctgatc
aagctggtggaggattgttacacagtgcgcgacgctcgtcttcatctacgtcatgtctgt
gatcttctgaggagcctcgaccctgcggacgcttacaacggcgtgaacggcagctcgctg
tcatacctcaccttttacaccagaggagacaaggacggtgaaaatgtggggaagaggcga
gtctctgagaaggagtccgttgaccacaggcctccggagttcatcctccctggatgtaag
gagcgacctcttcttccactgcagcccgtcagagacgactggaagcctttacagtgcctg
cgggttctgaccatgagcagctggaatcctcctccagggaacaggaagatgcacggagac
ctaatgtacctcaacgccctgaccatggaggacagagagctcaacattacgtcgtctaca
cgtggtttctacctcaaccagtccactgccttcaacttcaacccgaaacctgcagctccc
aaaatccactgccactccctggttgagctgctgaatcacgtcagtcctgcgttcaggaaa
aacttcagtgccctgcagaagagaagagtccagctgcacccttatgagcgtttcgcagca
ccttttcaggtgttcacctgggcggcccctcacggagagcacaccctggactgtgtccga
gcagaggagacgcacgccagccacatgggccaggacaagcacacagccgggcagagccgg
gattggaatgaggagctgcagggatgcagggaacttcccaggaagtccctgcaggagcgt
ctgcacagagagaggagcgtgtttaagaccaacagtgactttgttgccgctgcaacacaa
ggtgctgtggccgtaatcgacggtaacgtcatgccgataaaccccagtgaggcgcctcat
atgcaaatgttcatctggaacaacatcttcctcagcttggggttcgacatatctgagcac
taccgaccactggggggcaacactgctgctcacgctgctgccacctgcgacttgagagga
gctcaggcatatgcatctgtcgacacagatgggcttcacacccttgggacggctgtggtg
gattatcgtggtgtccgtgtcatcgctcagacgattgttcctgggatactggagaagagt
caggagcagagtctcgtctatggctctaatgactatggagcaactgtatttacgcaccca
aggtttctggagcttctggataaaacctgtaaaccactgagaatccagcgtcaccaggtg
ctcaaccacgacaacatcccagtggagctttgctctggcattgaaaccaagggcatcctg
ggtaatgatggacgaccttacatcttggatcttctccgcaccgtcccccctgacctcaac
ttccagttctcggagactgcaagtgagacgagggagatgagggagatggtcgaggaggtg
ccagaggaatgtaggagcttgggttacccacgggaacatcgtcacagcctggccagcctg
agaccggagctgaaagaagcctttgtccagcagaggtatgaactttatgtcaagatggtg
gcccaggggctcagccaactggaggaccaggataaagctacggagcagagtgaagaagat
ctggtctgtgagccgagaactggagatacaaccacagccgcagatgccatggaatctcag
agaagagatgtgatgacgaaagcttgtcaggctgtcggatccgtgagtgacactcgcttt
gacatccgcttcaatccagatgtttgctctccaggtgttcgtttctcagctgagtctgtc
gaggacgttcagagacagaggaagttgttatgggacgcagccgcttttctattgtccaat
cagattccagcagtgctgagggactgtctcgaccacacagcagtgccgatggatggaggg
accctgacgtcggtgctccaccagcagggtgtgaacgtgcgatacctgggcaccctactg
ggggagctgcacagggtggaggagagagggagactcggccacatcaagagacttgctgtc
agtgaagtcatcatcagaagtgcaaaacacatcttcaggacctttctacaggatgtggaa
cctgcagctttctctgctgccgtcagtcacttcctgaactgcctcttgagctcctcgtcc
tgcacccccgactccggctcagatgagctgctctctcgccgcaggagccgacgccgacgg
agccacgggagtcgagtcgccttgttgacggacagcgtgtgggcgaggctgacccccagc
gagctgtggggcaggatcagggctgaggccggagactacttcaactacatgataaacagt
gacagtatagatgaagtgatagaaaagcacggccttcagaggatctccctcctgagagag
atcgccatcaagatgggcatccaggtacagctgagggagtatgtgtttgagtctcgacac
aggccggtgtttggtgaggaagatgtcgtcaacatgttccctgtggtcaaacatctcaag
cccacagcgacagatgctacacggcttgtgcaacgtgcacaggtggcagtgcagcagggg
cttctcagagacggctatgagctgataagccaggccctgactctgttcagcagcgtctgt
ggggtcctgcatgaggacgtgtgcgtgtgtctgcgtctcctgggacgactcagctacatc
ttgggggaatatgcggatgctctcagccaccaggaaaaggttgttatgagtagtgagcga
ctccagggtattgaccatccacagaccatacaagactatactcacctgggcttgtactgc
tttgctggaggccaactctccatctccttaaagctgctgtatcgagcacggtacctcacg
ctgcttgtgagcggagaggaccatccgcaggtcgcactgctggatagtatgctgggtctc
gtgcttcatggactgatggagcatgaactttccctgaagttcctacagaatgccttaaat
ttgacctcaaaataccgcggcgccacatctgtgaggctggcacacagtcatcatctgctc
gccaccgtatacgagaccaaaggagagtttcgatcagctctgcaacatgaaagagaggct
tatacgatatataagagccaggtcggtgagaaccacgacagtacgaaggaaagctcagaa
tatctgaagagcctcactcagcaggctgtggtccttcagaaagccatcaaccatttctac
agtgacacgcccggtgcctgtgttccgcctctgaagttttccagtccgagccttcaggcg
attattcagcagctcaacctgacgtgtggaatcattctcatccccctcagtgcaaaagat
ctagcagacctgaggaaggggatgaagagacaggataaggttcaagtggaagagctggaa
aatcagttgttaaagcggaggaaagacacaggacaacaaaactga
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integrated database retrieval system
