Hippoglossus stenolepis (Pacific halibut): 118121682
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Entry
118121682 CDS
T08308
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118121682
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Protocadherins
118121682
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
118121682
NCBI-ProteinID:
XP_035033620
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Position
15:complement(7831839..7837783)
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AA seq
1000 aa
AA seq
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MRLSFSLQMDTQGAKGRQHGEWHAVFRVALFTCFLDAVLGQIRYSIPEELEHGAFVGNIA
EDLGLDLDKLSARRFRIVSGAKKQYVEVNLENGILFVNERIDREELCEQSLSCSFHLQVV
IENPLELYRVEMEILDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDLDIGTNSLRT
YLLSVNEHFLLDIQTRSDGSKFAELVLQSPLDREQQSAHQMVLTAVDGGAPERSGTAQID
ITVLDANDNAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKV
RQLFSVDSRTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNLPE
VILTSVSTPVQEDAPPGTVIAVISVMDKDSGENGNVDCEIPNQVPFQLHSSFKNYYTLVT
SDFLDRELVAEYNITLTARDMGSPPLFTRKTILVHVSDVNDNTPHFKQPSYTVYLTENNA
PGASICSVGAHDPDSGQNAYLSYSILEGDIQGMPVTTYVSVNSDNGNIYALRSFDHEQLK
NFQITVQAQDAGFPPLSSNVSVNIFILDQNDNPPVIVAPVGQNGTASEEAVPRSVDPGYL
VTKIRAADADAGQNARLFYQMLQATDPSLFSVALYTGEIRTIRPLMEKDPTRHRLVILVK
DNGQPALSATVSIILSVVDRLPDSRPDLDDLSLIPHHSSHFSLYLIVSLGAISFTFLVAI
IVLVAVRRLKGRPSDRESNFPSIPDCCCGCCSRSETSTTTEVFKKTNLNVRMSAGASGCA
EANSNGALPQVYCYKMCLTPESSKSDFMFLKPCSPVMSVQQNNAKSTDYLTSGWSALDRN
ELTNNRAATPNELKYSNKDWTWTKNQRNSAYKRYSSANMEGTLSRQQKYDADGFSCSVAP
QYWTWGNHMKDCKISLQEEAVPNYSWTPKYTQPHSDPPDYQHNVYIPGTTSGYSTLKLPP
RGDLDMYNTFSTFGKKKRFISNYEQSFDQDDGLISNAIFK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcagcttcagcctccagatggacactcaaggagcgaaggggagacagcatggg
gaatggcatgcagtgttccgtgttgcgctgttcacttgcttcttggacgcggttctggga
cagattcgttactccatcccagaggagctggagcatggcgcgtttgttggcaacatcgca
gaggacttgggtttggatttggacaagctgtccgctcgcagattccgaatagtgtccggt
gccaagaagcaatacgtggaggtgaatttggaaaatggaattttattcgtcaacgaaaga
atcgaccgagaagaactatgtgagcagagtttgtcctgttccttccacttgcaagtggtg
atagaaaaccctctggagctttacagggtggagatggagatcctggacgttaatgacaac
tcccccagtttcccgtggaccgagtttaacctggacatctcggagtctgctgcgcccgga
tcccgcttcccactcgagagcgcacaggacttggacatcgggaccaactcgctccgcacc
tatttgctgagcgtgaatgagcatttcctattggacatacagacgcgcagtgatggcagt
aaatttgcagagctagtcctgcaaagcccactggacagggagcagcaaagcgcgcatcaa
atggtcctcacagcggtggacggaggcgcgccggagagatccggcactgcgcaaattgat
atcaccgtcctggacgcgaatgataacgcgcctgtgtttgaccagtccttctacagggtg
cgcctggccgaaaacgcgcccaaaggcacagttgtcataaagctcaacgcgtccgacttg
gacgagggtcccaatgctgacatcacctactcgttcagtggccacgctcccatcaaagtg
cgccagcttttcagcgtggactctcgcacgggagaaataaaagtcaaaggggtgatagat
tatgaaaaggccaggatgcatgagatttacgtccaggctaaagataaaggcccctccgcg
gtggcggtccactgcaaagtgctggtgaacgttctggataagaacgacaacctcccagag
gtgatcctgacatctgtctccacacctgtgcaggaggacgcgcccccggggacggtgatc
gccgtcatcagcgtgatggacaaagactcgggtgaaaatgggaatgtggactgtgagatt
cccaatcaggtcccatttcagctccactcctcattcaagaactactacacactagtgaca
agtgattttctggacagagagttggtggcagagtacaacatcaccctcaccgcccgggac
atgggctctccacctctgttcactcggaaaactatcctggtccacgtgtctgatgtgaat
gataacacacctcatttcaagcagccttcgtatactgtgtacctgactgagaataacgcg
ccgggcgcatccatctgctctgtgggcgcacatgatccagattctggtcaaaatgcgtat
ctctcttactctattctggaaggtgacattcaggggatgccggtgaccacgtatgtgtcc
gtgaactcagacaacgggaacatttacgcgctgcgatcctttgaccacgagcaacttaaa
aactttcagatcacagtccaagcgcaggacgcagggttcccacctctgagcagcaacgtc
tcagtgaacatctttatcctggatcaaaacgacaatccgcctgtgattgtggcaccggtt
gggcaaaatggcacagcatccgaagaagcggtgcccagatcagttgacccgggttacctc
gtcaccaagatcagagcggcggacgcagacgcgggccagaacgcgcgtcttttctaccag
atgctccaggcgacagatccgagcttgttcagcgttgctctgtacacaggcgagatcagg
acgatacggccgctgatggagaaagaccccaccaggcacagactggtcattctggtgaag
gacaatggtcagccggccctctcggccacagtttccatcatcctgtcagtagttgacagg
ctgccagattcgcgacccgatttggatgacctgtcactaatcccccatcacagctcccac
ttctccctgtacttaatcgtgtctctgggcgcaatctccttcacatttctagtggctatt
attgtcctggttgcagtgcgcaggctgaagggcaggccctccgacagagagtccaacttc
ccctccatccccgactgctgctgcggctgctgctctcgctcggagacatccaccaccacg
gaagtgttcaaaaagaccaacttgaacgtccgcatgtccgccggcgcgtccggctgcgca
gaggcaaacagcaacggcgcgctgccgcaggtctactgctacaaaatgtgtctcacgccg
gagtcgtccaaaagcgactttatgttcctcaagccatgcagtccggtgatgtcagtgcaa
cagaacaacgccaagagcacggactatctgacctctggctggagcgcactggaccgtaat
gagctgaccaacaacagagcagcaaccccgaacgagctgaagtattcaaacaaggactgg
acatggaccaagaaccaacgcaactcagcgtacaagaggtatagttcagcaaatatggag
ggtactctttcacgccagcaaaaatacgatgctgacgggttctcctgctccgtggcgccg
cagtactggacctggggaaaccatatgaaagactgcaagatttcactccaggaggaggca
gtgccaaactactcatggactcccaagtacacccagcctcactcggacccacccgactac
cagcacaacgtgtacatccccggcaccacgtccggctacagcacccttaagctgccaccc
agaggcgacctggacatgtacaacaccttctccacgtttgggaagaaaaagagattcatc
tcaaactatgaacaatctttcgaccaggatgatggtctcataagcaatgccatctttaaa
tga
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