Hippoglossus stenolepis (Pacific halibut): 118121801
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Entry
118121801 CDS
T08308
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
118121801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118121801
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Others
GGA
118121801
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Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GGA_N-GAT
GAT
AP5B1_middle
Motif
Other DBs
NCBI-GeneID:
118121801
NCBI-ProteinID:
XP_035033864
LinkDB
All DBs
Position
2:complement(25500020..25508439)
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AA seq
606 aa
AA seq
DB search
MATGAGSETLDSWLNQATDPENQGDRWDCIQGFYQLVNQEADGPQVALSLLAHKIQSPQE
RESLQALTVLEACMNNCGKGFHSEAAKFRFLNELIKLLTPKYFGAWTPQKVKDRVTEVLY
GWTLWLKDEPKIQEAYNMLKTQGFVKEDPKLPDTLITAPPPQRSTESVFDQEDKAKLLAR
LLKSARPEDLETANRLIKSTIKEEQEKAEKALKRESTLKEVESSTRRLRELLKQNVTGTS
LPPSDDIKALYERCDRLRPGLFRLASDTTDDDAALAQVLAANDDLTLAVTAYKDQVGRRE
CNGARERRGEEEVRSENSAPTSPREIKSYHLIDLSALDSPQTHREADSPPFFDSSPPLVS
SHLDNAFHPVPPPFSESEFDKKETSKSYYEELMQLDDDVQKRSSEPNGGRGLQLRARACG
GGSIRSNGTSTWSFPQNHQFSGSGSNYTTPAEVSAETVCPPLLLKHVFVPMDTIKSSQLE
PITLFDQGGVHVSLHFARNSPVGHPGVAVVVISTVNTSALDVRDFLFQAAVPKSMLVKLQ
PASGTHLAPYNPLLPPPAISQVVLLANPQKRQVRLRYKLSLTHGDQQLMETGDIHSFPDW
NSLVGH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagccggttcggagactttggattcgtggctcaaccaggccacagaccca
gagaaccagggggacaggtgggactgtatccagggcttctaccagctcgtcaaccaggag
gccgatgggcctcaggttgcccttagtcttctggctcataagatccagtccccacaggag
agagagtctctgcaggcgctcactgtccttgaggcgtgcatgaacaactgcgggaagggg
ttccacagcgaggcggcgaagtttcggtttctcaatgagctcatcaaactcctaacaccg
aagtacttcggagcgtggactcctcagaaggtgaaggaccgcgtgacggaggttctgtac
ggctggacgctgtggctcaaagacgaacccaagatccaggaagcgtacaacatgctgaag
acacaaggcttcgtgaaggaagaccccaaactaccagacacactcatcacggctcctcca
ccacaaagatccacagagtctgttttcgaccaggaggacaaggccaagcttttagccaga
ttattgaaaagtgctcgtcctgaagacctggaaactgcaaaccgactcattaaaagcacc
atcaaggaggagcaggagaaggccgagaaagctctgaagcgtgaatctactctgaaggag
gtggagagcagcaccaggcggctccgagagctcctgaagcagaacgtcacaggaacctcg
ttaccgcccagtgacgacatcaaggccttgtacgagcgctgtgaccggctgaggcccggc
ctgttccgtctggccagcgacacgacggacgacgacgccgctctggcgcaggtcctggcg
gccaacgacgatctcacactcgcggttaccgcctacaaagaccaggtggggagaagagag
tgcaacggtgcaagagagagaagaggtgaagaagaagtgaggagtgaaaacagcgctcct
acgagtcccagagagattaaaagttaccacctcatcgacctgtcggctctggattctcct
cagactcacagagaagctgattcacctccgttctttgactcctctcctccgcttgtctcc
tctcacctggacaacgccttccaccctgtgcctcctcccttctctgaatcagagtttgat
aaaaaggagacttcgaagtcgtattatgaggaactgatgcagcttgatgacgatgttcag
aagaggagcagcgagccgaacggagggagaggacttcagctgagagctcgggcatgtgga
ggcggcagcatcagatcaaatgggaccagcacttggtctttccctcagaatcatcagttc
agcggctcaggatcaaattacacgacgccagcggaagtgtctgcagagacagtttgtcct
ccactgttgctgaagcacgtctttgtgccaatggacaccatcaaatccagtcagctggag
ccgatcactttattcgatcagggcggcgtccacgtctctcttcactttgccaggaactct
ccagtgggtcacccgggcgtcgctgtggtcgtcatctccaccgtgaacacgtccgccctc
gatgtgagagacttcctgtttcaagctgctgttcccaagagcatgttggtgaaacttcaa
cccgcctcagggacgcacctcgctccatacaaccccctcctgcctccacctgccatctcc
caggtcgtcctgctggccaatcctcagaagcggcaggtgcgtctgcgctacaagctgagc
ctgacacatggagaccagcagctgatggagaccggagacatccacagcttcccggactgg
aactctctggtcggccactga
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