Hippoglossus stenolepis (Pacific halibut): 118121839
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Entry
118121839 CDS
T08308
Symbol
nectin3b
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
hsp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118121839 (nectin3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118121839 (nectin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118121839 (nectin3b)
04090 CD molecules [BR:
hsp04090
]
118121839 (nectin3b)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Nectin family
118121839 (nectin3b)
CD molecules [BR:
hsp04090
]
Proteins
118121839 (nectin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
C2-set_2
Ig_2
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
118121839
NCBI-ProteinID:
XP_035033933
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All DBs
Position
15:complement(9383330..9410067)
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AA seq
549 aa
AA seq
DB search
MSPSSHRSHRGGHGVVALLHVLCSIIGLCCSQVVVPQRVSAVLGKNVTLECRVEMDLETN
LTLTQSSWERRLPSGAVTLAVYNPEYGISIPELSHRLHFRSPSFYDATIVLENVGFADVG
IYTCKAATFPLGNSQASTTLNVLVEPKVYVSAGSTALIDGGNETVVATCIAERARPPAEV
SWESNLFGQSEVQLFDEVNGTTSTQVRYLWQPTRHVQGHALTCVVRHPALLSDFRIPYQL
NVQFAPDISVVGYDGDWYVGRENVQMTCKANANPPAHHFKWIRLDSEMPEGVEIMNSTLL
FLRPLQRKDSGVYRCEVANDINLRSRDVRILIQDPPTMPSTITAPVLAGSASSTLVDDKG
HVLLSSPTLEALPESNLGSVVGGAVGGTLFLLLLLSMVGVYYLRKQQTFHGNYYTPYLGP
NHLQKAPTQHELRPTKAGSSSFRRDHDREEWGASQLKQEHSHSDSNGEEYPPNGFTRAMR
ESSHHCNQQNHQREHTQYSSPWQARLPHPPKPQGNGSPCQSDDCYDSGTDADYVSHTDGS
VISRRELFV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgtcatctcaccggagccaccgtggaggacacggcgtggtcgcgttactccac
gttttatgcagtattataggtctgtgctgcagtcaagtggtggtacctcagagggttagt
gctgtgctggggaagaatgtgacattggagtgtagggtggaaatggacttggaaacaaac
ctcactctcactcagagttcctgggagcgccgcttaccttcgggcgccgtcaccttggct
gtctacaaccctgagtatggcatctccatcccagagcttagtcaccgcttgcatttccgc
tcaccctccttttacgatgccaccatcgtcctggaaaacgtgggctttgctgacgtcggg
atctacacctgtaaggccgctacatttcctttgggaaactctcaagcctccactacgctc
aatgtgctcgtggagccgaaggtctacgtgtcagcaggttcaaccgccctgatcgatggt
ggcaatgaaaccgtggtggccacctgtatcgctgagcgggctcggccccccgctgaggtg
tcctgggagtccaacctgtttggccagtcagaagtgcagctgttcgacgaggtcaacggc
accaccagcacacaggtgcgctacctctggcagcccacacgccacgtccaaggccatgcg
ctcacctgtgtggtccgccacccagcgctgctgagtgacttcaggatcccataccagctc
aacgtgcagtttgctcctgacatctcagtcgtgggctacgatggagactggtatgtgggt
cgggaaaacgttcaaatgacttgcaaggccaacgcaaacccaccagctcatcacttcaaa
tggatcagattggacagtgaaatgccagaaggggtggaaataatgaatagcactctgctc
ttcctgcgtccccttcagcggaaggattctggagtatacaggtgtgaggttgccaatgac
atcaacctccgcagtcgggatgtgcgcattctcatacaagatcctcccaccatgccttcc
accattactgctcctgtcctagctggctctgcctcctccaccttagtggatgataagggc
catgtcctcctcagctcccccacactcgaagccctacctgagagtaatcttggttccgta
gtgggtggtgctgtgggtgggaccttgttcctgctactgctgctgtctatggtaggcgtg
tattacctacgcaaacagcagaccttccacgggaattactacaccccgtacctgggtccc
aatcacctccagaaagcccctacgcagcacgagctccgcccaaccaaagccggcagcagc
tccttccgccgcgaccacgaccgggaggagtggggcgccagccagctcaaacaagagcat
tcccatagcgactctaacggagaggagtatccccctaatggcttcactagggcaatgagg
gagagcagtcaccactgcaatcagcagaatcaccagcgtgaacacacacagtattctagc
ccatggcaggcccgactaccgcatccaccgaaaccacagggaaacggctccccctgccag
tcagatgactgctacgatagcgggactgatgcggactatgtctctcacacagatggctcg
gtcatctcacgtagggagttgttcgtttga
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