Hippoglossus stenolepis (Pacific halibut): 118121903
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Entry
118121903 CDS
T08308
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118121903 (tbc1d8b)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118121903 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
118121903 (tbc1d8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
118121903
NCBI-ProteinID:
XP_035034039
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All DBs
Position
15:complement(9196060..9212556)
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AA seq
1131 aa
AA seq
DB search
MWLKPDEILLKNAFKLWLTEKDNEYFVLQRRRGYGEGGGGLTGLLVGTLDTVLDSTSKVA
PFRILHHTPDSQVYWSIACGVTKEEIVQHWDWLQQNIMRTLSVFDSSEDITSFVQGKIRG
LIAEEGKMSLVLEDDPEKFREALLRFEKWFELPPQEKLVTYYSCSYWRGKVPCQGWLYLS
TNFLCFYSYLLGSEVKLVISWDEIWKLEKTANVILTESIHVLAHGEDHYFSMLMHLNETF
VIMEQLADYSIKRLFDKEAFKKEPALSDPMQITKRGLEAHAKSAQFRTFFRLPNEENLLE
AHESFLWVPFCHFNTLGKICLSENYLCFASQDGSQCHIIIPMREIVNVEKPDSSSKALTV
CVRGKRAVRFSEVRDYQRLANAIRSRCGISPSPQHSASSEVIRGECQSLINHFEDNPEDV
TLMVGQKDSSKAVSTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
RKTRDLIVRGVPEALRGELWMLFSGAVNDMATHPGYYTEVVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLTFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMDALISCHDDAEAVTILNKFFDSVTNKD
SPLPPTVQQASVGHNDKSSHLNVDISELIREAYEKYGNIRSEEVESSRKRNKLYVIQTLE
DTTKQNVIRVVSQEVRFSASHLDELYNLFKRQHFLSCYWTMQSPALLHHDPSLAYLEQYQ
LGFQQFSVLFSLLEPWGFCTTKSTLSLWVFRLIDENQDGLVNFKEFCWAIDTLCCGSFTN
KLKFLFKLHLPPAFTGSPLHVKEQRIQHFIPVTEDSSHLSRLTAFDLPEDGVIRKSPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQTQFIQFSKTLYNIFHGNPEEESLYRAVA
HVTSLLLRMEEVGRRLQESSSPPESTKPSGISAAEESSAEDASSTPESSDTSSSHNSQDA
GAEVDWSFSFEQVLASLLNEPTIVRFFERPFDIQRKLAQAKVAQLKLKVKK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaaacctgacgagatcctgctgaagaacgccttcaaactgtggctcaccgag
aaggataacgagtacttcgtgctgcagaggagacgggggtacggagaaggtggcggcggg
ctgacaggcctccttgtgggaactctggatactgtcttggactccacatccaaagttgcc
cccttccgcatccttcaccacacacccgactcacaagtgtactggtcgatagcatgtggt
gtcaccaaagaggagattgttcagcactgggattggctgcagcagaacatcatgaggacg
ctctctgtgttcgactccagcgaagacatcaccagctttgtacagggcaagataagaggt
cttattgctgaggaaggaaagatgtccctggtgctggaagacgatcctgagaagttccga
gaggcactcttgaggttcgagaagtggtttgagctgccgccgcaggaaaagctggtcacg
tattactcatgcagctactggagaggcaaagtgccgtgccagggctggctctacctcagc
accaacttcctgtgcttctattcatacctgctggggtctgaggtgaagcttgtcatctcc
tgggacgagatctggaagctggagaaaactgccaacgtcattctgaccgagagcatccat
gtcctggctcacggagaggaccactacttctccatgctgatgcaccttaatgaaaccttc
gtcatcatggagcagctggccgactactctatcaagcgcctttttgacaaagaggccttc
aagaaagagccggcgctctccgaccccatgcaaattaccaagagaggcctagaagctcat
gcaaagagtgcgcagttccgcacgtttttcaggcttccaaatgaggaaaacctgttagag
gcgcatgagagcttcctgtgggtgcccttctgccattttaacacacttggcaagatctgt
ctctcggagaactacctgtgttttgccagtcaggatggcagccaatgccatatcatcatt
ccaatgcgagagattgttaacgttgagaagccagactccagcagcaaagctttaacggtg
tgtgtgcgcggcaagagggcagtgcggttctccgaggtgcgagactatcagcggcttgcc
aacgcgattcgtagcaggtgtggcatcagtcccagccctcagcactccgcttcatcagag
gtcatacgaggcgaatgtcagtcactcatcaaccactttgaggacaatccagaggatgtg
actctcatggtgggacagaaagacagcagcaaggctgtcagcacagaggcgctcatgacg
gttttccacccccaggatgttgaaaaccttgaccccaaaatgcttaaagaaaagatgaag
gagcagtcttggaacattcatttctctgaatatggacgtggcacaagtatgttcttcacc
aggaagacacgagacttgatagtccgtggtgttcctgaggccttgaggggagagctgtgg
atgcttttttcaggagctgtgaacgacatggccactcatcccggttattacactgaggtg
gttgaacagtctctgggcacgagcactctggctacagatgagattgaaagagacttgcac
cgctccctgccagagcacccggcctttcagagcgacacagggatctcagctttacgcaga
gtcctgactgcttatgcctacaggaaccctaaaatcggatactgccaggccatgaatatt
ctcacctcagttctcctgctctacgcaaaagaggaggaggcgttctggctcctagtggcc
gtgtgtgagaggatgttgccggattactttaaccgccgaattattggtgctttggttgac
caggccgtgttcgaggacctgattcgggaaaacctgccccagttggtagagcacatgaca
gacctgactttcttctcgtccgtatccctgtcctggtttctcacgctcttcatcagtgtc
ctgcccatagagagcgccgtgaacgtggtcgactgttttttctacgacggcataaaagca
atcctgcagctcggcctggctgtgctggactacaacatggatgcgctgatcagctgccat
gacgacgcggaggccgtcaccatccttaacaaattctttgacagtgtaacaaacaaagac
agcccgttacctcccacggtgcagcaagcgtcagtgggacataatgataaatcatcccac
ttgaacgtggatatcagtgaactgatccgagaggcctacgagaaatatggaaacatccgt
tcagaggaggtcgagagctcacggaaaagaaacaaactctatgtgatccagacactggag
gatacgaccaagcaaaatgttattcgagtggtgtcccaagaagtcagattcagtgcctca
cacctcgatgaactttataatttgttcaaaaggcagcatttcctcagctgctactggaca
atgcagagtccagctcttctccatcatgaccccagcctggcgtatttggagcagtaccag
ttgggtttccagcaattcagcgtgctcttctctcttctggagccctggggtttctgcacc
accaagagcaccctctccctctgggtcttccgcctgatagacgagaaccaggacggcctt
gtcaactttaaagagttctgctgggccatcgacactttgtgctgtggatctttcacaaat
aagctgaaattcctcttcaagctgcacttgccaccagcttttacaggtagtcctttgcac
gtaaaggagcaaagaatccagcactttattccagtgactgaagactcctctcacttgagt
agactcactgcatttgatcttccagaagatggcgtgataaggaaaagcccagaaagaggt
agaggaaaggtggacctgcaggcctacctgaaacagtggcaaaatgaaatactgaagaaa
gaagaaaccatcaaggaccttccccgtattaatcagactcagttcatccagttctccaag
accttgtacaacatttttcacggcaacccagaggaggaatctctgtaccgagctgtggcc
cacgttaccagcctcctcctgaggatggaagaggtgggacggaggctgcaggagtcgagc
agcccgcccgagtccacgaagccctccggcatctctgctgcggaggagtcttcagccgag
gacgcctccagcaccccggagagctctgacacctccagctcccacaacagtcaggacgca
ggagccgaggtggattggtcgttctcgttcgaacaggtgctggcgtctctgctcaacgag
ccgaccatagttcgctttttcgaaaggccctttgacattcagcgtaaactggcacaagcc
aaggttgcccagctgaagctgaaggtaaagaagtga
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