Hippoglossus stenolepis (Pacific halibut): 118121914
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Entry
118121914 CDS
T08308
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118121914 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118121914 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118121914 (vps36)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
118121914 (vps36)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118121914 (vps36)
Exosomal proteins of colorectal cancer cells
118121914 (vps36)
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Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
MA3
Motif
Other DBs
NCBI-GeneID:
118121914
NCBI-ProteinID:
XP_035034067
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Position
15:13271557..13277358
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AA seq
382 aa
AA seq
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MDRFFWSNGLLEINETLVIQQRGVRLYDGDDKAKLDVGVALLSTHRLIWRDVKNHECCIA
MPLSQILFFEEQAAGIGKSAKIVIHLHPAPANKEPGPYQHSKYPFIKLSFKEHGQIEFNR
RLTEEMTQKRWESTPVSQPIPTGTGSQTGKTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIADPVTRETHGSGTH
YHLQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLQLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttttttttggtcaaacgggcttttggaaataaacgaaactttagtgatccaa
cagcgaggcgtgcgactgtatgacggcgacgataaggcgaagctggacgttggagttgcc
ctgttgagcacccaccggctgatctggagggacgttaaaaatcatgaatgctgcatagcc
atgcccctgtcacagatcctcttcttcgaggagcaggctgcaggaatagggaagagtgca
aaaatagtcattcacctgcatccagcacctgccaacaaggagccaggtccctaccaacac
agcaaatatcccttcatcaagctgtcgttcaaagaacacgggcagattgagtttaacagg
aggctaacagaagagatgactcagaagagatgggagagtacaccagtgtcacaacccatc
cccacaggaacaggttctcagacaggaaagacacgtgcggtggggattgttggcatcgag
aggaagatagaggagaagaggaaagaaacagacaaaaacatttcagaggcctttgaggac
ctcagtaagctgatggtgaaggccaaagagatggtggagttgtccaggtctatagccaac
aagattaaagacaagcagggagacataacagaagatgagacaatccggtttaagtcttac
ctactcagcatgggtatagctgaccctgtcaccagggaaacacatggatcgggcacacat
taccacctgcagctggctaagcaactgggagatatgctacaagcccctctagaggagcgt
gggggaatgatggctctcactgaggtgtactgtcttgtcaaccgtgctcgagggatggag
cttttatctccagaagatttggtcaacgcctgcaagatgtttgagtcgttgcagctccct
ctgaggctgcgtgtgtttgacagtggtgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatcgcctctgcactggacaacgtgtcagataaaggttcgttgacagctgag
gagtttgcaaaactcttgggtctctctgttcttctgtctaaggaacggttgctgctggcg
gagaagatgggtcacctgtgtagagatgactctgtcgagggtttgagattctacccaaac
ctcttttga
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