Hippoglossus stenolepis (Pacific halibut): 118121931
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Entry
118121931 CDS
T08308
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118121931 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118121931 (chrne)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
118121931 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF1286
Motif
Other DBs
NCBI-GeneID:
118121931
NCBI-ProteinID:
XP_035034097
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Position
15:complement(10057976..10066897)
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AA seq
517 aa
AA seq
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MALRSFGIFFGVVTILGRLMVEVQCNEESKLISDLFKDYKKNIRPVVHPEDKLTIQIKMT
LTNLISLNEKEETLTTNVWIEIQWVDYRFVWNTSDYYGIDIIRVPCHTVWLPDIVLENNI
DGKFDVAYYANVLISSTGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSAKEV
ELILAVDENEHTIEWVDIDPEAFTENGEWAIVHRPGRKMINKRYTPDDLEYQEILYNLII
QRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKVPE
TSLSVPLIGKYLIFVMCVTTLIATNQIVVLNFSLRSPSTHTMSHSIKHVFLEMVPRFLGM
SPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVMKQPRSEMMFDKQRERHGLTRSIVDN
MDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRQQNNIGSEIESWVLIGKMIDKVCFW
AAVLLFMIGTVGIFLTGHFNQVPEFPFPGQSNKYIPT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcgcagttttgggatattttttggagtagtaactattcttgggcgattaatg
gttgaggtgcagtgtaatgaggagtcaaagctgatcagcgacttgttcaaagactacaag
aaaaacatacgacctgtggttcatcctgaggacaagctgacgattcagattaagatgacc
ctcactaaccttatctcactgaatgaaaaggaagagactcttacgaccaacgtgtggatt
gagattcaatgggttgattatcgcttcgtgtggaacacctctgactattatggcattgat
attattcgtgtcccgtgccacacagtgtggcttcctgacattgtccttgagaacaacatc
gatggcaagtttgacgtggcttactatgccaatgtgttgatcagcagcactgggtggatg
tactggctacctcccgctatctatcggagcacttgtgccattgagatcacctacttcccg
tttgactatcaaaactgcacgctagcattccgatcccagacttacagtgccaaagaagtg
gaacttattttggctgtagatgaaaatgaacatactattgagtgggtggacatcgaccca
gaggcgttcacagagaatggcgagtgggccatcgtccatcgtccgggcaggaagatgatc
aacaagcggtacaccccggatgacctggagtatcaggagatcctgtataacctgatcatc
caaaggaagccgctgttctacatcatcaacatcatcctgccctgctccctcatctcctca
ctggtcgtactggcctacttcctccctgcacaggctggaggacagaagttgactgtggcc
atctccgtcttgctggctcaaactgtcttcctcttccttattgctcagaaagtccctgag
acgtctctctccgtccctctaattggcaagtacctgatctttgtcatgtgtgttactact
ctcattgctaccaatcaaatcgtggtgctgaacttctccctgcgcagccccagcactcac
accatgtcccacagcatcaaacatgtgttcttggagatggtgcctcgtttcctgggcatg
tccccactggtggatgacagcgaggtgacgacagaggtcaacggagtgagggagcggcgg
cgcagctccttcggcctcatgcagagagcagaggaatatgtgatgaaacaacctcgcagt
gaaatgatgtttgacaaacagagagagaggcacggtctaacacggtctatcgtggataat
atggacgtcagcagcacagccaacctgtacaagagtttggcccaagctgcacctgagatc
aagcagtgtgtggatgcctgcaacttcatcgctgagagtaccagacaacagaacaacatc
ggatctgaaattgaaagttgggtcctgatcgggaagatgattgacaaggtgtgtttctgg
gctgccgttctcctcttcatgattggcacggtggggatcttcctgacaggacacttcaac
caggtgccagaatttccatttcctggccagagcaacaaatacatcccgacataa
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