Hippoglossus stenolepis (Pacific halibut): 118121945
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Entry
118121945 CDS
T08308
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin B/C
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03320
PPAR signaling pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04137
Mitophagy - animal
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118121945 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118121945 (ubb)
04137 Mitophagy - animal
118121945 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118121945 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118121945 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118121945 (ubb)
Ubiquitin system [BR:
hsp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
118121945 (ubb)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of breast milk
118121945 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
118121945 (ubb)
Exosomal proteins of colorectal cancer cells
118121945 (ubb)
Exosomal proteins of bladder cancer cells
118121945 (ubb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
118121945
NCBI-ProteinID:
XP_035034121
LinkDB
All DBs
Position
15:complement(6332539..6341078)
Genome browser
AA seq
1065 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIXPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIXPDQ
QRLIFAGKQLEDGRTLSDXNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGXTLSDYNIQKESTXH
LVLRLXGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPI
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcactggcaagaccatcaccctcgaggttgagcctagt
gacacaattgaaaatgtcaaagctaagatccaggacaaggaaggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcggctcaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggttgagcccagcgacaccattgaa
aatgttaaggccaagatccaggacaaggaaggtattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgttaaggcc
aagatccaggacaaggaaggtattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccat
cttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagacc
atcaccctggaggttgagcccagcgacaccattgaaaatgttaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagcccagcgacaccattgaaaatgttaaggccaagatccaggacaaggaaggtatt
nccccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactataacatccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctcactggcaagaccatcaccctggaggttgagcccagc
gacaccattgaaaatgttaaggccaagatccaggacaaggaaggtattnccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgacntaaac
atccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcactcttgaggttgagcccagcgacaccattgaa
aatgttaaggccaagatccaggacaaggaaggtattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactataacatccagaaggag
tccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgttaaggcc
aagatccaggacaaggaaggtattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggcnncaccctctccgactacaacatccagaaggagtccaccntccat
cttgtcctgcgtctcnagggaggcatgcagatcttcgtcaagaccctcactggcaagacc
atcactcttgaggttgagcccagcgacaccattgaaaatgttaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactataacatccagaaggagtccaccctccatcttgtcctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagcccagcgacaccattgaaaatgttaaggccaagatccaggacaaggaaggtatt
cccccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccaccctccatcttgtcctgcgtctgaggggaggt
atgcagatcttcgtcaagaccctcacgggcaagaccatcaccctggaggttgagcccatc
gacaccattgaaaatgttaaggccaagatccaggacaaggaaggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcggctgagaggcggcatgcagatcttt
gtgaagaccctcacgggcaagaccatcaccctcgaggttgagcccagtgacaccattgaa
aatgtcaaggccaagatccaggacaaggaaggcattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggtatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgtcaaggcc
aagatccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgaggggaggtatgcagatcttcgtcaagaccctcactggcaagacc
atcaccctggaggttgagcccagcgacaccattgaaaatgtcaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctgaggggtgggcaataa
DBGET
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