Hippoglossus stenolepis (Pacific halibut): 118121945
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Entry
118121945 CDS
T08308
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin C
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03320
PPAR signaling pathway
hsp04120
Ubiquitin mediated proteolysis
hsp04137
Mitophagy - animal
hsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118121945 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118121945 (ubb)
04137 Mitophagy - animal
118121945 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118121945 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118121945 (ubb)
Ubiquitin system [BR:
hsp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
118121945 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
118121945
NCBI-ProteinID:
XP_035034121
LinkDB
All DBs
Position
15:complement(6332539..6341078)
Genome browser
AA seq
1065 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIXPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIXPDQ
QRLIFAGKQLEDGRTLSDXNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGXTLSDYNIQKESTXH
LVLRLXGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPI
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcactggcaagaccatcaccctcgaggttgagcctagt
gacacaattgaaaatgtcaaagctaagatccaggacaaggaaggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcggctcaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggttgagcccagcgacaccattgaa
aatgttaaggccaagatccaggacaaggaaggtattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgttaaggcc
aagatccaggacaaggaaggtattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccat
cttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagacc
atcaccctggaggttgagcccagcgacaccattgaaaatgttaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagcccagcgacaccattgaaaatgttaaggccaagatccaggacaaggaaggtatt
nccccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactataacatccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctcactggcaagaccatcaccctggaggttgagcccagc
gacaccattgaaaatgttaaggccaagatccaggacaaggaaggtattnccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgacntaaac
atccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggcaagaccatcactcttgaggttgagcccagcgacaccattgaa
aatgttaaggccaagatccaggacaaggaaggtattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactataacatccagaaggag
tccaccctccatcttgtcctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgttaaggcc
aagatccaggacaaggaaggtattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggcnncaccctctccgactacaacatccagaaggagtccaccntccat
cttgtcctgcgtctcnagggaggcatgcagatcttcgtcaagaccctcactggcaagacc
atcactcttgaggttgagcccagcgacaccattgaaaatgttaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactataacatccagaaggagtccaccctccatcttgtcctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcactcttgag
gttgagcccagcgacaccattgaaaatgttaaggccaagatccaggacaaggaaggtatt
cccccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccaccctccatcttgtcctgcgtctgaggggaggt
atgcagatcttcgtcaagaccctcacgggcaagaccatcaccctggaggttgagcccatc
gacaccattgaaaatgttaaggccaagatccaggacaaggaaggcattcccccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaggagtccaccctccatcttgtcctgcggctgagaggcggcatgcagatcttt
gtgaagaccctcacgggcaagaccatcaccctcgaggttgagcccagtgacaccattgaa
aatgtcaaggccaagatccaggacaaggaaggcattcccccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgaggggaggtatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggttgagcccagcgacaccattgaaaatgtcaaggcc
aagatccaggacaaggaaggcattcccccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgaggggaggtatgcagatcttcgtcaagaccctcactggcaagacc
atcaccctggaggttgagcccagcgacaccattgaaaatgtcaaggccaagatccaggac
aaggaaggtattcccccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaggagtccaccctccatcttgtcctgcgt
ctgaggggtgggcaataa
DBGET
integrated database retrieval system
