Hippoglossus stenolepis (Pacific halibut): 118121956
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Entry
118121956 CDS
T08308
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00562
Inositol phosphate metabolism
hsp01100
Metabolic pathways
hsp04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
118121956 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
118121956 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118121956 (synj1)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
118121956 (synj1)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
118121956 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
118121956
NCBI-ProteinID:
XP_035034175
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All DBs
Position
15:19718320..19743057
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AA seq
1723 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVLVETRTREECLMFESGAVAVLSAAEKEAIKSTYSKIVDAY
GILGVLRLNLGDSMLHSLVVVTGCSSVGKVQDSEVFRVTQTDFISLKNDPGDEDRIAEVR
KVLNSGHFYFAWSSTGVSLDLSLNARRRILEDTTDNRFFWNQSLHLHLKHYGVNCEDWLL
RLMCGGVEIRTIYAGHKQAKACIFSRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DRVSSFIQIRGSIPLFWEQPGIQKKSIKGVLLHLNENRNLSGPDENPHLVGSHRVKLSRG
FEANAPAFERHFTALRRLYGKQVIINLLGSKEGEHMLSKAFQSHLKASEHAGAVKMVNFD
YHQNVKGGKADKLHSVLKPHVNKFVDECGFFYYSGESGITRTQGGTLRTNCLDCLDRTNS
VQAYFALEMLPKQLEEMSLTEKPQLVARFQEVFRTMWSVNGDSVSKIYAGTGALDGKAKT
GKLKDGARSVTRTIQNNFFDSSKQEAIDILRLGSTLNSDLADKARALLTTSSLYVTEPVL
QSASPRVLLGMCQNYHKYTMPKQIRVCVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPKKA
GHPEFQDSKANPIDIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKNISRDHKYVLLA
SEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGGVAIRLLFHTTSICFVCSH
FAAGQSQVKERNDDYSEITRRLSFPMGRLLYSHDYVFWCGDFNYRISLPNEEVKELIKQQ
SLEALTAGDQLLDQKNAGLVFRGFIEGKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRIL
WKRRKWNFDKTAEEMNIVGAASTSCENEEDPDNPWNPGTLKYYGRAELKTSDHRPVVAIM
DVDILEVDPDARHQVYKDVIAMQGPPDGTILVSLCTSGPDDYFDDTLIDELLDKFAQFGE
VILIRFVEEKMWVTFLEGYSALAALSLSASTVLGKVIDIRLKSSGWIKSLEEEMSVERIC
GSIPTSASSTLLAEDTDMGDDDYDMEGDVDEEVEEILPQHLQPGAGAAGSSPLPSPHSSP
SPSPTHGEPSAPSRPSRAQQPSRPSQADLSPSSVRRGSSGPPVDFQPGAPTSLCLEPKRA
PPPRPNAPPARPAPPQRPPPPSGGMSPLPVRKNSGAFQLDYGECPSPLLGRRGSEGPKSP
ALPRPSAAAARGAAGAPAPGGFPRPNIPPRAGVISIPPQSRPPHPSHPGAPRPIPEMHPG
APRPIPDTHPGAPRPVTGVLEKPTDLPLGPPLSGPLPAVRPQAPSEMPPQPPAPSVQSQL
PRPIQPTLQAPLQPQQAAAPKGGFPPAAAAAAASPAGPPQGLASPKPPPRSRSSHVLPPD
DAKPETAPAAQTNGLNGLQNEAQWKPDPFETLLSSSSSSSWHTTQSLTRGSSLRAPPSVP
PSTFSSSTLPSSFSLQPSALSDLQALDSSSSSSLSTPSPLASTLLPPPPAPSRSRSQETL
RASPCPFPTESLPARPSSTNPFTGPLTQLHRSLTPDFSVQRPGPASNPQRPMLALTQPLI
PTRCPAMVPAAAPASQLQGTMSLFAPSSMLSPAPPAPFTPDPSPAPALPLAPPSSIPPTI
APRLQPPPPGGNPTKQWVTFDDDLGFSTATKTPHIPVVPSNSLLPQTQTPRSVFDSEPDW
LSTAPSAFPTLPPPVSTRTATANPKLPEGPSDSCFFPGESTER
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagcaagggatatcgcatttaccacaagctggacccgcccccttacagtgtc
ctagtggaaacaaggaccagggaagaatgtctcatgtttgaatcgggggccgtcgctgtt
ctgtcggcagcagagaaagaggccattaaaagtacctacagcaagatagtggacgcctat
ggaatcctgggcgtcctccgcctaaacttgggggactccatgctccacagtctggtggtg
gtgacaggatgtagctctgtggggaaggtgcaggactctgaggttttcagggtcacacag
acagactttatatcactgaagaatgatccaggagacgaggaccggatcgctgaggtgcga
aaggtcctgaactcaggacacttctactttgcttggtcttccactggagtcagtttggac
ctgagtctcaatgcacgtcgcaggatcctagaagatactacagacaaccgcttcttttgg
aaccagtctcttcacctgcacctgaaacattacggagtaaactgtgaggactggctgttg
aggctgatgtgcggcggtgtggagatcaggaccatctatgcaggtcacaaacaggccaag
gcctgcatcttctcccgcctcagctcagagcgagccggcacgcgatttaatgtccgggga
acaaacgacgatggacaggtcgccaactttgtggagactgaacaggttattttcctggat
gacagagtgtcctccttcatacagatccgtgggtccattcctcttttctgggaacagcca
ggaatccagaaaaagtccattaagggtgttttgttgcatctgaatgagaatcggaacctt
agtggaccggatgaaaacccccacctggtcggctctcatcgtgtcaaactctcaagggga
tttgaggctaacgcaccagcgttcgaaagacacttcactgcactgcggaggttgtacggt
aagcaggtgatcatcaacctgcttgggagtaaggaaggagaacacatgctcagtaaagcg
ttccagagtcatctaaaggcgtcggaacatgcgggagcagtgaagatggtgaactttgac
taccaccaaaatgtgaagggaggcaaagcagacaaacttcacagtgtcctgaaaccccac
gtcaacaagtttgtagacgagtgcgggttcttctattactctggagagtccggcatcaca
aggactcagggtgggaccctcaggaccaactgcctggactgtctggacagaactaacagt
gtacaagcctatttcgccctcgagatgctgccgaagcagctggaggaaatgagtctgacg
gagaaaccccagctggtggcccggttccaggaggtgttcaggaccatgtggtcggtcaat
ggagattccgtcagtaagatctatgcaggcaccggggctctggacgggaaggccaagact
gggaagctgaaagacggagctcgctctgtgacgaggaccatccagaacaacttcttcgac
agttctaagcaagaggcgatcgacatcctgagactgggctccacactcaacagtgatttg
gcggataaagctcgggccttgctcaccacttccagtctttatgtcactgagcccgtctta
caatcagcctccccaagggtattgctgggaatgtgtcagaactaccataaatacacaatg
cccaagcagatccgggtgtgtgtcggcacctggaatgtgaacgggggtaaacagtttcgc
agcattgctttccgcaaccagacgctcaacgactggctgcttgatgctccaaagaaggcg
gggcatcctgagttccaggacagcaaagccaaccccatagatatatttgccatcggtttt
gaggaaatggttgaactgaatgccggcaacatcgtcagtgccagcaccacgaaccagaag
ctgtgggcagctgagctccaaaaaaacatctcacgggaccacaaatacgttctactggct
tcagagcagctggtgggagtgtgtctgtttgttttcatccgcccacagcatgcgcccttc
atcagggatgtggccgtggacactgtaaaaactggaatgggcggagccacaggcaataaa
ggtggtgttgccatccgcctcctgttccacaccaccagcatctgctttgtctgctcccac
ttcgctgctggccaatcacaggtcaaggagaggaatgacgactacagtgagatcacgcgc
aggctcagctttcccatgggtcgtctgctgtactcgcacgattatgtgttctggtgcgga
gactttaactatcgcatcagcctgcccaacgaggaagtgaaagaactcatcaaacagcag
agcttggaagccttgacagctggagaccagttgttggatcagaagaatgctggtttggtc
ttccgaggttttatcgagggaaagttagattttgctcccacctataagtatgacctcttc
tcggaagattatgacactagcgagaagtgccgcacaccagcctggactgaccgtatactc
tggaagaggaggaagtggaactttgacaaaacggctgaggagatgaatatagttggtgca
gcttctacatcttgtgagaatgaggaggatccagacaacccttggaaccccggcactctg
aagtactatggcagggctgagcttaagacctcagaccacaggcctgtggtggcgataatg
gacgtggacatcctggaggtcgacccagatgctcggcaccaggtttacaaagatgtcatt
gccatgcaggggcctccagacggaaccatcctagtgtcgctctgcacctccggccctgac
gactactttgacgatacgctcatagacgagctgctggacaagtttgctcagtttggagag
gtcatcctcatcaggtttgtcgaggagaagatgtgggtgactttcctggaaggttactct
gctctcgctgctctttcgctcagtgcttccactgtccttggcaaagtgattgacatccgt
ctgaagagttcaggctggatcaagagtctggaggaggagatgagtgtggagaggatctgt
ggaagtatccccacctcagctagctccactctgctggctgaggacacggacatgggcgac
gatgattacgacatggagggtgatgtggacgaggaggtggaggagatccttccccagcac
ctacagcctggagcaggcgcggcaggatcctcgcctctgccctccccccacagcagcccc
agtccctccccgacccacggagaaccatcggcccccagcagacccagtcgtgcacagcaa
ccctcccgaccatcgcaagctgatttaagtccatcgtcagtgaggagaggaagttcaggg
cctcctgttgacttccagccgggtgcccccacatctctatgcctggagcccaagcgtgca
cctccccctcgtcctaatgcacctccagccagaccagcaccccctcaacgtccacctcca
ccttcaggaggcatgagccctcttccagttaggaagaactctggagcttttcaacttgac
tatggcgagtgtcccagccctctgctcggtaggagaggcagtgaaggaccaaaaagcccg
gctcttcctcggccctctgctgctgcagctcgaggagcagcaggagctcctgcgcctgga
ggtttccccagaccgaatatccctcctcgagccggggtgatcagtattcccccacagtct
cgcccaccacatccttctcacccaggagcacctagaccgataccagaaatgcatcctgga
gccccccgacccatcccggacacccatcctggagcccctcgacctgtgaccggtgtcctg
gagaaacccactgacctgcctttgggccctccactctcaggaccacttcctgcagtgaga
ccccaggctccatcagaaatgccgccccaacctcctgccccctcagttcagtcccagctc
ccacgaccgatccagcccacacttcaagctccgctccagccgcagcaggctgcagctccc
aaaggaggatttcctcctgctgctgctgctgcagctgcctcccctgctgggcctccgcag
ggtctggcctctcccaaacccccaccacgttcccgctcctctcacgttctgccgcctgat
gacgccaagcctgagacggccccagctgcacagaccaatggactgaatggactccaaaac
gaagcacaatggaagcctgaccccttcgaaacactcctctcctcctcttcctcctcctcc
tggcacaccacccagtccctgaccagaggctcctctctgcgagctcccccctctgttcct
ccatctacattctcctccagcactctcccctcatccttctccctgcagccctctgctctg
tcagacctgcaagcgctcgattcatcctcctcttcctcgctctccaccccatcgccactt
gcctccaccttgctaccgcctcctccggccccgtctcgcagtcgctcgcaggaaacgctg
cgtgcctccccctgccccttcccgactgagtcgcttcctgcccgacccagcagcaccaat
cccttcacaggtccgctcacacagctacatcgctcgctcaccccggacttcagcgtccag
cgtccaggcccggcatcaaaccctcagaggcccatgcttgctctcactcagccactcatt
cccactcgttgtccagcaatggtccctgcagctgcacccgcctcccagctccaggggaca
atgtccctttttgcaccttcatccatgctcagtcctgcacccccggctcccttcaccccc
gacccatctcctgctcctgccttgcctctggcaccaccctcctccatcccacctaccatt
gcccctcgcttacaacctcctccaccgggaggcaacccaaccaagcagtgggtcactttc
gacgatgatttgggtttctcaaccgcgacaaaaacaccacacatccccgtcgtcccttcc
aattcccttctgccccaaactcagactcctcgctctgtgttcgactcggagcccgactgg
ttatccacggccccttcggcattcccgaccctccctcctcccgtctctaccagaactgca
actgctaaccccaaactcccagagggtcccagtgacagctgcttcttccccggggagtcg
acagaaagatag
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integrated database retrieval system
