Hippoglossus stenolepis (Pacific halibut): 118121980
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Entry
118121980 CDS
T08308
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04517
IgSF CAM signaling
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118121980 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118121980 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hsp04812
]
118121980 (sptbn4a)
Cytoskeleton proteins [BR:
hsp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118121980 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
118121980 (sptbn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
UPF0508_N
Motif
Other DBs
NCBI-GeneID:
118121980
NCBI-ProteinID:
XP_035034235
LinkDB
All DBs
Position
15:complement(3323476..3349169)
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AA seq
1538 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRPVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAVKSYSDLDNQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGLMAGDKGGGEQSGMVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLASCKDYGNNLQSVQQHVKKNQTLQ
RDLTGRRARVEEVLDRAGIIASLRTPEVEFVREGASHVRQLWEVLQLETERRSVMLDAML
QSQQYYSEAAKVESWLSGQKLYLVSEEKGTDEASTLQLLKAHLALEQTVETYAETVGMLS
QQCQRLLEMGHPDSEHITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKDVEELER
WITEREAVASSTELGHDLEDVTVLQETFTKFASETNNIGQQRMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVM
EAWKELLSSCGASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALEVMIK
QHMELKAKIDGRSKTIQQCADLGKILIAAGNPASEEIKEKLDSLLSKQKDLVEKWDKHQE
RLQRKQEYFQFAQETVRAEAWLKAKEPLITSKQPEGGEAPAQTDEAEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEKKTTPLSSRRMFPLSCLTPNVASTSATSPFLRQTVLA
HIEPKPLQSCLDMGATPATQRLSSTLANYNPVINGSGYHGHEQQSSGKLMSSPYLGMNHQ
AAGGGSDSGFSALTSHSGGADTSTYLGINHQTVGSAESSGYFGLTAGCVGSIQNHFSSGR
LGSSGNLAQQPSSGGLGNPGLLAQQNMGSSGYLAQTQNMGSPVYLGQQPNLGSSGYLAQQ
PNTGSSGYLAQQPNTGSSGYLAQQPNMGSSGYLVQQPNMGSSGYIPQNYPSSGGFGSSGF
LAQNQYSSGSLGSSNYLAQSGGIMDPKMAYAWQHLKADFMQPRINHIHKAVNPLLEASRV
QREQYGDIPMADMMGPESGLELLHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQE
IQARLNELPMIVRQERYRRRLERQSSSEQEGSGKPRLQRQDSSDLEGSIKDGSDKRSGEK
RNTMAEIVEQVQEREAASARGDPYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEE
TRRSRSAPATGAPTTPQPPSHNAHNEGFLYRKKTNSSDLEAQQRSPNSKSWVNVYCVLKE
GQLTFYKDARNHNTTYNGEPPVELSNCSFDPSMGYKKKKNVFLLQINDGHFFVFHAKDEE
DLKAWTSNLTTGISDHEHMAKWDKPGTSSMDPDHSERKEKSEGDADARSERSELAEGEER
SEKERSEKGDGSEKLDTSEIADKLEGGAGGSSTSGKSK
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacacggcgcgggatgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcagagctggcccgcaataaagaatggctggccaagatagaa
caggagggtcaggagctgatccaggagaagccggagctgcgtccggtggtccagcagaag
ctggaggagatcagagagtgctggtccgacctggagagcaccaccaaggccaaggcccgc
cagctctttgaaaacaacaagcctgagccggcggtgaagagctactcagacctcgacaac
caactctcccacctggagcagcagccccctcagctggagcaggcgcaccacctgcccacc
ttcaatgagcagctgcagaagtttcaggctatggagtctcagataggggacttttacaag
gatgtgggggagctgggaagcttgcagggggtctgcctaccccagcgaggcctgatggca
ggtgacaagggaggcggcgagcagtcaggcatggtggagacgcgcatcgtccgcctcatt
gagcccctgaaggagagacgccgcatcctgctggcttccaaagagatgcaccaagtcgcc
caggacctggaggatgagatactgtggattcaggagaggcttcccctggcctcctgtaag
gattatgggaataacctccagagtgtacagcagcatgtaaagaagaaccagacactccag
agggatctgaccgggcgccgggctcgtgtagaggaggttctggatcgggcgggcatcatc
gcttcactgaggactcctgaggtggagtttgtacgtgaaggcgcgagtcacgtgcgccag
ctgtgggaagttctgcagctggagacggagaggaggtctgtgatgctggacgccatgctg
cagtctcagcagtactacagcgaggcagctaaagtggagtcctggctgtcaggtcagaag
ctctatctcgtcagtgaggaaaaaggcacggatgaggcgagcaccctgcagctgctgaag
gcccacctggctctggagcaaacagtggagacatatgcagagacagtcggcatgttatcc
cagcaatgccagcgtctactggaaatgggacatccagacagtgagcacatcaccaagcag
cagtcccacatagatcggctgtacgtgtctctgaaggacatggtagagcacaggaagacc
aaactggagcagcagtactggctctatcagctcaacaaggatgtagaggagttagagagg
tggatcactgagcgcgaggcggtggccagttccaccgagctgggccacgacctcgaggac
gtcacggtgcttcaggagacgttcaccaagtttgcctccgaaaccaacaacatcgggcag
cagcgcatggagcaggtgaacaaaatggtgaacgagatgatcgactgtggccactcggac
gcggccaccatcgctgagtggaaggatggactaaatgagtcgtgggcggacctcctggag
ctgatggagacccgcagacagatgctggcagcttcgcaccagctgcacaagttcttcacc
gactgcaaagaggtcttggctcagatcgcagggaagatgaagcagttgccagaggtgagg
gcatgccaggccaacatcaccaatccagccaccctgcagagactcatgcactcctttgag
catgcccttcaactgctagtagcacaggtgaggcagctccaggagaacgccgcccagctg
aggactatctatgctggtgagaaggctgaggccatcatggtcaaagagcaggaggtgatg
gaggcgtggaaggagctgctgagctcctgcggggctagtcgcgtccaggttacttcagtg
accgataaggtgcagttcttctcggtagtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagataggatgggatgagcccagggatttgacagctctggaggtgatgataaaa
caacacatggagctgaaagccaaaatagacggccggagcaagaccatacagcagtgtgcg
gatctgggcaagatcctgatagctgcaggaaaccctgcatcagaagagataaaagagaag
ctggacagtcttctgtctaagcagaaggatcttgttgaaaaatgggacaagcaccaggaa
aggttacagcgcaagcaggaatacttccagtttgcccaggagacggtgagggcggaagcc
tggctaaaagccaaggagccgctgatcacctccaagcagccagaaggaggagaggccccg
gcccaaacagacgaggctgagcagctcatcctccgccacgaggccttccgcaaggctgct
gtaacctggaaagaacgcttcagctccctccgccagctttccgcagctgagaagaagaaa
gaggaggagaaaaagacaaccccactgtccagcagaaggatgttcccattatcttgtctg
actccaaacgttgcctcaaccagtgctacctcacctttcttgaggcagacggtactggca
catatagaacccaaacccttacagtcctgtctggatatgggtgccactccggccacccag
agattgtcctcaacgctagccaactacaacccagtcataaatggatcaggctaccacggt
catgaacagcagtccagtgggaagttgatgagctccccgtaccttgggatgaaccaccag
gcagctggaggtggaagtgactccggtttctctgcattgacctcccatagtggtggagca
gacacttctacttaccttggaataaaccatcaaactgttggcagtgcagaaagctctggg
tattttggactgactgctgggtgtgtgggtagtatccaaaaccattttagcagtggcaga
ttagggagttcgggtaatttagctcagcagccaagtagtggaggtttaggaaaccctgga
ttactcgctcaacagaatatgggcagttctggatatttggcccaaacacaaaatatggga
agtcctgtatacttaggacaacagcctaatttagggagttcaggatatttggcacaacag
cctaatacggggagttcaggatatttggcacaacagcctaatacggggagttctgggtat
ttggcccagcagcctaacatggggagttctgggtacttggtgcaacagcctaatatgggg
agttctggatacataccgcagaattatccgagcagtgggggatttggtagctcaggcttt
ctggcacaaaatcagtacagcagtggaagtctgggcagttccaattacctagctcagagt
ggcggcatcatggaccctaaaatggcatacgcatggcagcaccttaaagctgacttcatg
cagcccaggatcaaccacatccacaaggctgtaaaccccctcctagaagccagcagagtg
cagcgggaacagtacggtgacatcccaatggcagacatgatgggaccggagtctgggctg
gagctcctccatggccgtctccagagggatccccgcggtagtcgctctgaccctcagatg
gaccatctgaggcgagagagggagtacaagctgggtagacagacctccagtgaacaggag
atccaggccaggctaaacgagttgccaatgattgtgcgtcaggagcgctacaggagacgc
ctggagagacagtcgtccagtgaacaggagggaagcggcaagccgaggctgcagaggcag
gactctagtgacctggagggctccattaaagatggctctgacaagcgctcaggggagaag
agaaataccatggcagagattgtagaacaggtccaggagagagaggcagcatctgcacgg
ggagacccctatcggcctcctagcagcctttcagcaccagtgactcgttttgacggacgt
cctcgtgcccgtgaccgtccaaaaccaaggaggaggccccgtccaaaagagcctgaggag
acacgacgttctcgctcagccccagcaactggagccccaacgacaccccagccaccctca
cacaatgcccacaatgaaggcttcctctatcgcaaaaagaccaacagctctgacctagaa
gctcagcagaggagccccaacagtaagtcctgggtgaatgtatactgtgtgctgaaagag
ggacagctgaccttctacaaggatgccaggaaccacaacacaacgtacaatggagagcct
cccgtcgagcttagtaactgctcatttgatccttcaatgggatacaagaagaagaaaaat
gttttccttcttcaaataaacgatggacacttctttgtattccatgcaaaggatgaggag
gacctgaaggcgtggacttcaaacctcaccacgggtatatctgaccatgagcacatggcc
aagtgggacaagcctggcacctcgtccatggaccctgaccactcggagaggaaggagaag
tcggagggagacgcggatgccaggtcagagaggtcagagctcgctgagggggaggagagg
tccgagaaggagaggtcagagaagggggatggctctgagaagttagacacgtcagaaatc
gctgacaagctggagggcggggcagggggctccagcacgtctggaaaaagcaaatga
DBGET
integrated database retrieval system
