Hippoglossus stenolepis (Pacific halibut): 118121984
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Entry
118121984 CDS
T08308
Symbol
usp25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118121984 (usp25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118121984 (usp25)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118121984 (usp25)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118121984 (usp25)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118121984 (usp25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
UBA_4
PhnI
Motif
Other DBs
NCBI-GeneID:
118121984
NCBI-ProteinID:
XP_047199446
LinkDB
All DBs
Position
15:complement(3510139..3540644)
Genome browser
AA seq
1223 aa
AA seq
DB search
MPADELRYSVRHGARDVADEGGDLIASCCISRQCKLSRAFSYSGLKYFKFPCEPAMTVEQ
NVLQQHSQKHQQTLLNQLREITGTTDVQLLQQALQVSNGDLAEAVAFLTEKNAKVPQQDE
ATYYQTSQVASDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESSRAFRETGITDEE
QAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRKRIDNCPVGLKNVGNTCWFSAVIQS
LFNLLEFQRLVLHYSPPARVHDLPRNQKEHRNLPFMQELRHLFSLMVGSKRKYVDPSRAV
EILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKAEEDREGEKPKNPMVELFYGRFLAV
GVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSARSGQEHWFTE
LPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIRRLKEH
LTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCSSPVEDIDSSVPPGGTAGQQ
LPPPSTAEQESLPPPESSGSASGPPTASTAAQQQRVPIHKPFTQSRLPPDLPMHPAPRHI
SEEELRVLEGCLHRWRSEVENDTRDLQGSITRIHRTIELMYSDKSMMQVPYRLHAVLVHE
GQANAGHYWAYIYDPHQRCWMKYNDISVTKSSWEELVRDSFGGYRNASAYCLMYINDKKP
FLIEEEFDKETGQLLSGMDKLPPDLKHYVKEDNELFDKEVEEWDTLQARKAQQEKLAMVA
AAAAACAASSNSTSSSSPQPMSTESSPPDNTVAQQEPEYMEQPSPTNDSKHLQEDTERAI
CRAAAEQEERSPEALLNASVPPPTSPQPEVQVSNPSTPPPDLVMEDESPGQRTVEVAIPN
VGTFVIDSEEGGYDDEAMMTPNMQGIIMAIGKSGCIHEKNGPEAAFFKAIKLEYARLLRF
AQEDTSLENDYRLQHVIVYFIQNQAPKKILERTLLTQFADRNLAFDERCKSIMNVARAKL
DLIKPEEVNMDEYEMWHQDYRNFRETSVFMMTGLELFQKTNYVEALMYLIYAYQYNKELL
SKGLYRGHDEELLSYYRRECLLKLNEQAAAMFESGEEPEVTTGLGIMNELVVPCIPLLLV
HDTERDLLAVEDMRNRWCSYLGQEMESNLQEKLTDFLPKLLDCSTEIKSFHDPPKLPSYS
TLELCERFSRIVAAVSRIPSEGR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagacgagctgcggtactcagtccgtcatggcgcccgtgatgtcgctgatgaa
ggaggggacctcatagcttcgtgttgtatatcgcgccagtgcaaattatcccgtgcgttt
agctactctgggttgaaatactttaaattcccctgtgaaccggccatgaccgtggagcag
aatgtcctccagcagcattctcagaagcatcagcagactctactaaaccagttgagggag
atcacaggaaccacagacgttcagctacttcagcaggctctgcaggtgagcaatggagac
ctggccgaggctgtagcctttctgacggagaagaatgcgaaggtccctcagcaagatgag
gcaacctactaccagacatcccaggtggccagcgacagatacatcagtgtgggcagccag
gcagacacaaatgtcattgacctgactggggatgataaagatgacctgcagagggctatc
gccctcagcctggaggagtccagccgtgcatttagggagacgggcatcactgacgaggag
caggccatcagcagagttttggaggccagcatagcagagaacaaggcgagtctgaagcgc
acccacacagaagtatggagtgactcacccaacccacatgacaggaagaggatagacaac
tgccctgtggggctgaaaaatgttggcaatacctgctggttcagtgctgtcattcagtct
ctgttcaacctgcttgagttccagaggctggtgctccactactctccaccagccagagtc
catgacctgccccgcaaccagaaggagcacagaaacctgcccttcatgcaggagctgagg
cacctcttctccctcatggtggggtccaagaggaaatatgtggatccgtcacgagctgtg
gaaatcctcaaagacgcctttaagtccagtgagtcacagcagcaggatgtgagcgagttc
acccacaaactgctggactggctggaggacgccttccagatgaaggctgaagaagacagg
gagggcgagaaaccaaagaaccccatggtggagcttttctatggtcgcttccttgctgtg
ggcgtcctggaaggtaaaaagttcgagaacacagagatgtttggacagtacccactgcag
gtgaacggcttcaaggatcttcatgagtgtcttgaggctgcaatgattgagggcgagatc
gagtccctgcactcggcagagaactctgcccggtctggacaagagcactggttcacagag
ctccctcccgtgttgacctttgaactgtcaagatttgaattcaaccaagcactaggacga
cctgagaagatccacaacaagctggagttcccctcgatgctctacatggacaggtacatg
gacaggaacagggaaataaccaggatcaagagggaggagatcaggaggcttaaagagcat
ctgacgctcctccaacagcgactggagaggtatctgagttatggctcaggccccaagagg
tttcctctggcagatgtcctccagtacgccatggagtttgcctccagtaagcctgtgtgc
agttccccagtagaggacattgactcatcagtgccccccggtggcacagcaggacaacag
ctgcccccaccaagcacagccgagcaggagtccctgccccccccagagagctcaggctct
gcttcaggtccccccacagcttctactgcagcccagcaacagagagtacccattcataaa
ccctttacacagtcccgacttcctcctgacctgccaatgcaccctgccccgcggcacatc
tcagaggaggagctgagggtgcttgagggctgcttgcatcgttggaggagcgaagtggaa
aatgacacccgtgatctgcagggcagcataaccagaatccacagaaccatagagcttatg
tactctgacaaatctatgatgcaggtgccataccggcttcatgcagtgctggtccatgaa
ggccaggccaatgcaggccactactgggcttatatctacgatccacatcagcgctgctgg
atgaagtacaatgacatctcagtcactaagtcgtcgtgggaggagctggtcagggactcg
tttggaggctaccgcaacgccagtgcttactgtctcatgtatatcaacgacaagaagccc
tttctcatagaagaggagtttgataaggagacgggacagctactcagtggcatggacaaa
ctgcctccagacctgaagcactatgtgaaggaggacaatgagctgtttgacaaggaggtt
gaggagtgggacactctgcaggcccgcaaggcccagcaggagaagctggcgatggtcgct
gcggccgctgctgcctgcgcagcatccagcaactccacctcttcctcctcccctcagccc
atgagtactgaatcaagccctccagacaacacagtggcccagcaggagccagagtacatg
gagcagccgtcacccacaaacgactccaaacacctgcaggaggacacagagagagccatc
tgtagagctgctgcagagcaagaggagagaagccctgaagcattgttaaacgcttctgtt
ccccctcccacttcccctcagcctgaggtccaggtgagcaacccctctacccctcctcct
gacctggtcatggaggatgagtccccaggccagcgcaccgttgaggtggccattcccaat
gtggggacctttgtcattgactcagaagagggggggtatgatgacgaggcgatgatgacc
cccaacatgcagggtataataatggccattggcaaatccggctgcatacatgaaaagaat
gggcctgaggcagccttttttaaggccataaagctggagtatgctcgtcttctgagattc
gcccaagaggacacatcacttgagaatgactaccgacttcagcacgtcatcgtctacttc
atccaaaaccaggcccccaagaaaattctggagaggactctgctcacacagtttgctgac
aggaacctggcatttgatgagagatgtaagagcattatgaatgtggcacgtgccaaactg
gacctaattaagccagaggaggtcaacatggatgaatatgagatgtggcatcaggactac
aggaacttccgcgagacgagcgtcttcatgatgaccggcttggagctctttcagaagaca
aattacgtggaggctctgatgtatctcatttacgcgtatcagtacaacaaggagcttttg
tccaaagggctgtatcgaggtcatgacgaggagctgctgagttactaccgtcgagagtgt
ttgctgaaattaaacgaacaagcggccgccatgtttgaatccggagaagaacccgaggtg
accacgggcttaggaatcatgaatgagctggtggtgccctgcatccctctgctgctggtc
cacgacacggagagagacctgctggcggtggaggacatgaggaaccgctggtgctcttac
ctgggccaagagatggaatccaacctccaggagaagctaaccgacttcctccccaagtta
ctggactgctccacggagatcaaaagcttccacgacccgcccaagctgccctcctactcc
actctggagctgtgtgaacggttcagccgcatcgtggctgccgtcagcaggatccccagc
gaggggagatga
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