Hippoglossus stenolepis (Pacific halibut): 118122046
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Entry
118122046 CDS
T08308
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118122046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118122046
Enzymes [BR:
hsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118122046
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118122046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118122046
NCBI-ProteinID:
XP_035034347
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Position
15:5971417..6054953
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AA seq
825 aa
AA seq
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MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVTLLKNEPTGKPITLEGVF
VGGSAGYADGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDALPRPVVLVEAEHAEELMGLVNKNEEAKVRIEIKVEQS
RWPHYDMGILLTIILAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAINRLETKTYNSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLVQHRTCP
LCMHNIMGEDKHIYRTERQPQRSRLQQSPEQSQGFLQPQHYSSPHNHPFPQHAIPFSMRP
HYPRGPSGPYPSLGHYSGSSPMDTQTLRFLTSRPLGPGCGYRLPAEGPGRPHRIGGNCRT
STHHYTPRRSCHNYRLSCPTQRSASCSRLHHTASGTPQTRGAPAHSRQDEGSCSGGSYHT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYFG
PGPGRGPRRNSLEAGAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHS
QGPSRGSDEEQGAAAAAAPAALVLDKDSPVGPAKHSPCQCPKPDPTDRPSPGQGERHDHD
PSSPSGPPVLMSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLPDDRS
IHIHYGQGPGFCCSPPELHPALLPVPLILDSGGMEEWPCCAGAHVVWQKRVQQARSEPQL
LGPGTSMDRPPCRLHHGPAADCNTDICLYCQTLHHNQGSEEESGV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagcggtcatc
aaggtgacactgctgaagaacgagccgacggggaagcccatcaccctggagggggtgttc
gtgggaggaagcgccggctacgcggatgggaaactaatgcagtatcaccctttgtcattg
tgcaacacaagcgaggatgaacggcaagagagtgacttcatcaccattgtcaagctggag
cacagggtaccccgctgcctgccgctgctcgataaggctcgcatggcgctggacaaagga
gctcaggctgttatctttgacgtcagtgatgatgccaatgctgctgctgagctgcgagaa
acagacgcccttccgcgaccagtcgtgctggtggaggccgagcatgcagaggagctgatg
ggtttggtcaacaagaatgaggaggccaaagttcgcattgagatcaaggtggaacagtct
cgatggccccattatgacatgggtatcctgctcaccatcatcttggctattctcaccatc
gtcttaatctttgccttccgttacaagtgcaagtccaacaggacctgggactctgtccac
cagcagaccatgcgggccatcaatcgcctggagaccaaaacctacaactctcagggctgc
tcgggctcgcagcggcaccgggcggcctggggctcagccagcagctccaactcgagcccc
gtctgtgctatctgtctggaggagttccaggacgggcagcacctgaggatcatctcctgc
gctcatgagttccataaagactgtgtcgacccctggctggtgcagcaccgcacctgtccc
ctctgcatgcacaacatcatgggtgaggacaagcatatttacaggacagagcggcagccc
cagaggagcagactccagcagagtccagagcaaagtcaaggcttcctccaacctcagcat
tacagcagcccacacaaccaccctttccctcaacatgctatccccttctctatgaggccc
cactatcctcgtggaccctctggaccatatccctctctgggccactatagtggctcttct
cccatggacacgcaaactctgcgtttcctcaccagcaggccgcttggccctggctgtggg
taccgccttcctgcagagggtcccgggaggccccacaggattggaggtaactgcaggacg
tccactcaccactacacgcctcgtcgctcctgccacaactatcgtttgtcctgtccgacc
cagcgcagtgcatcctgctcaagactgcatcacactgcctctggcacgccacagacccgt
ggagcgcctgcccacagtcggcaggatgagggcagctgctcaggtggcagctaccacaca
gaacgcagtggatatttggctgacgggccagcaagtgactccagctcagggccctgccat
ggctcctccagcgactcagttcttaactgtactgacgtgtccctgcagggagtttatggc
agctggtccaccttccgtagctctctgagtagtgactacgatccatttgtatattttggg
ccaggtcctgggcggggccctcggagaaacagcctagaggctggtgcgcaagcccggccc
aggtctctggattctgtggtgaacaaagcgggctgccctgaagaacagccacagactgtg
ttcagccacatccactaccaccgccacagacaccaccactatgaggagggggagcacagc
cagggcccgagcagaggctcggacgaggagcagggggccgctgctgctgcagcacctgct
gctcttgtcctggacaaagactcacctgtgggccctgctaagcacagtccctgccagtgc
ccaaagccagaccccacagatcggcccagcccaggacagggagagcgtcatgaccatgac
cccagcagtccctcaggacctcctgtcctgatgtccccgatccccttacagctccaaccc
cactgctgccaccagggacatggacacccccccgctcctcttgggcgagttggtggctgt
gttcttgatggcccctctgttcgcttccaccagagcctggatctgccggatgaccgtagc
atccacattcactacggccagggcccaggcttctgctgctctccccccgagctgcacccg
gctttgctccccgtgcccctcattctggactccggagggatggaggagtggccttgctgt
gccggggcccatgtcgtgtggcaaaaacgggtgcagcaggctcgctcagagcctcagcta
ctggggcctgggacttctatggacaggccaccctgcaggctccaccacgggcctgctgct
gactgcaacacagacatttgtttatactgccaaacattacaccacaatcagggatcagaa
gaggagtctggtgtttga
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