Hippoglossus stenolepis (Pacific halibut): 118122054
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Entry
118122054 CDS
T08308
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118122054
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118122054
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Sina_ZnF
BUD22
Motif
Other DBs
NCBI-GeneID:
118122054
NCBI-ProteinID:
XP_035034364
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All DBs
Position
15:19082190..19087354
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AA seq
708 aa
AA seq
DB search
MSRQSRASRERQHVHCDSCYSRRCRARVEVSVCCALIPCRLHCGALFHLCKEEDHLLLCP
NVRVPCLNAGYGCPVQLPRSSQAAHLQVCPASVVCCSMEWNRWPSQDAHSYPNTELHENL
LRERKQGGCLDLAMALKDQDRLFHSMKMKRLFPELIQGVDEEEKKEERREEERRKERQKK
ASLVKEAAEKEAGAHTWESFVTLNIQDKDDDEDEVEVENDQLLTQEEREAIATASSIDAN
LLENYRAWEHMFSMERGGCREAGEAAVGGTGQGPAKGNSKGLGLIEEDAADMCVGATASN
TCKQVSRAATSSSSSSSGKLTKKKFVYGYLEPMKIITVRTFNVPTSFSAKQCRIRNPGFY
RRESRAVDTSDLGVTLKDMPVWEEIQASLLCSLEKEQRGHLIAESACSDGLLQDEGTQTY
NFLSAPFQRNTSLAHLTAGKPLELHLQLQVESVTSRHHKASSAFTFLCGHTFQRREYGKH
YKNIHSDIQMCVNGWFEQRCPLAYLGCTYSQRRFQPSTHEASVTFNESLGCFSLHSTIPL
GDAPQPSRSSADSLPSQSRRGGRAGGEEASLSLLPYEVLCHVTSFLDSLSLSQLALVSQL
MRQVCSSLLQDRGMVTLRWERTTDSHGGARWRVKQTVWQFSNLFSPVDAWCFRDVPSISE
HLKRCPYYTTESRTDKVQLPRFREDVQTNMSCKGPTLVDLVQQKRIMM
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcagtctcgagcgtccagggagcggcagcatgtccactgtgactcctgctac
agccggcgctgcagggctcgggtggaggtctctgtgtgctgtgccctcatcccctgccgc
ctgcactgtggagctctgttccacctgtgcaaagaggaggatcacctgctgctctgcccg
aacgtgagggtgccgtgcctcaacgccgggtacggctgcccggtccagctgccccgctcc
tcgcaggccgctcacctccaggtgtgcccggccagcgtggtgtgctgctccatggagtgg
aaccgctggccgtcccaagatgctcactcctatcccaacacagagctgcacgaaaacctg
ctcagagaaagaaagcagggaggatgtctggacctggccatggccctgaaagaccaggac
cgcctgtttcactccatgaagatgaagagactgttccctgagctcatccagggtgtagat
gaggaggagaaaaaagaagaaaggagggaggaggagaggaggaaggaaaggcagaaaaaa
gcttccttggtgaaggaggcagcagaaaaggaggccggtgctcacacctgggagtctttt
gtcacgttgaacatccaagacaaagatgacgatgaagatgaagttgaggttgaaaatgat
cagctgttgactcaggaggagagagaggctattgccacggcctcaagcattgatgctaat
ctgttagaaaactacagggcttgggagcatatgttcagtatggagaggggcggctgcagg
gaggctggagaggcagctgtgggaggcacaggccagggaccggctaaagggaacagcaaa
ggcctgggcctgattgaggaagatgcagcagatatgtgtgtgggtgcaacagcatccaac
acctgcaaacaggtgagcagggcagccacatcctcctcctcctcatccagcggcaaactg
acgaagaagaagtttgtgtacggatacttggagcccatgaagatcatcactgtgcgcaca
tttaatgtcccaaccagcttctctgccaagcagtgccgcatccgcaaccctggtttctac
aggagggagagccgggccgtggacaccagcgacctgggggtgacgttaaaggacatgcct
gtgtgggaggaaattcaggcctctctgctgtgctccctggagaaggagcagaggggtcac
ctcatcgcagagagcgcgtgctcagacggtctgctgcaagacgagggcacgcagacctac
aacttcctgtccgctccctttcagaggaacacgtcgctggcccatctgactgccgggaaa
ccgctggagctgcaccttcagctgcaggtggagagcgtcaccagccgacaccacaaggcc
agctccgccttcaccttcctctgcggacacacctttcagcgcagagaatacggcaaacat
tacaagaatatccacagtgacatccagatgtgtgtgaatggatggttcgagcagaggtgc
cccctcgcgtacctgggctgcacctacagccagaggaggttccagccgtccacacatgaa
gccagcgtcaccttcaatgagagtctgggctgcttcagcctgcactccaccatcccactg
ggtgacgctccccagccgtccaggagctctgcggactccttaccctctcagagcaggaga
ggaggtcgtgcaggaggagaggaggcctctctgagcttgctgccgtacgaggtgctgtgc
cacgtgaccagtttcctggacagtctgtccctgtctcagctggctctggtgtcccagctc
atgaggcaggtgtgctcctctctgctgcaggaccgagggatggtcaccctccgctgggag
aggaccacggactcacatggaggagccaggtggagggtgaaacagacggtgtggcagttc
agcaacctgttctctcccgtggacgcctggtgcttccgagacgtgccgtccatttcggag
catctaaagcggtgtccctactacacgacggagtccaggacagacaaggtccaactgccg
cgtttcagagaagacgtccaaaccaacatgagctgcaaaggtcccactctggtcgacttg
gtccagcagaagaggatcatgatgtag
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