Hippoglossus stenolepis (Pacific halibut): 118122059
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Entry
118122059 CDS
T08308
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118122059 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118122059 (cadm1a)
Cell adhesion molecules [BR:
hsp04515
]
Immunoglobulin superfamily
Nectin family
118122059 (cadm1a)
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Ortholog
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GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C1-set
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
118122059
NCBI-ProteinID:
XP_035034374
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Position
15:20777117..21106860
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AA seq
441 aa
AA seq
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MANTGSGSLATILFLFLFQAAPHKGAAQYPVVSQNLVTDNVSVVEGDMAMISCRVKDNDD
SVIQLLNPNRQTIYFRDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTDPP
QEAYADITVLIPPGNPIIEARDEVLSEGNETEMTCTAMSSKPAATIRWMKGDKELPGKPK
VELTYDKMYTVTSRLTFTVNKEDDGVPVICIVDHPAVKDFQAQKYLEVQYKPEVKIVVEF
PQGLTREGENLELTCQAKGKPQPQRVNWVKVDDDVPSHAVITGGDLYIENLNKSYNGTYR
CVASNSVGESFDDYILYVYDAPTTTPIPTTATTTTIITTTISYPEANQDSAPSTEPAAHD
SRAGEGAPRTVDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADAD
TAIINAEGGHTNSDEKKEYYI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacactggcagcggctctctggcgactattctctttttattcctcttccaagcg
gccccgcacaaaggagctgctcagtacccagtggtgagtcagaacctggtgacggacaac
gtgtccgtggtggagggggacatggcgatgatcagctgtcgggtgaaggacaacgacgac
tccgtgatacagctgctcaaccccaacaggcagaccatctacttcagggacgtgaggcca
ctgaaagacgctcgctttcagctggtgaacttctccgacaatgagctgcgggtgtcactg
tctaatgtctcgctgtcggacgagggtcgatatgtttgccagctctacacggaccccccg
caggaagcctacgctgacatcactgtgctaattcctccaggtaaccccatcatcgaggcc
cgggatgaggtcctgagtgagggcaacgagacggagatgacctgcactgccatgagcagt
aagcccgccgccaccatcagatggatgaagggagataaggagcttccaggcaagcccaaa
gtggagctgacctacgacaagatgtacacagtcaccagccgcctcacgttcactgtgaat
aaggaggacgacggtgttcctgtgatctgcatcgtggaccatccggcagtgaaggacttc
caggcacagaaatacctcgaggtgcagtacaaaccggaggtcaagattgtggtggaattt
cctcaggggctgaccagggaaggagagaacttggagttgacgtgtcaggccaaaggcaaa
ccccagccacagcgggtgaactgggtcaaggtggacgacgatgtgccgtcacatgccgtc
atcaccggcggcgatctctacatcgaaaacctaaacaagtcgtacaacggaacctaccgc
tgtgtggcgtccaattcggtgggggagtctttcgacgactacatcctctatgtctatgat
gctcccactaccacccctatacccaccacagccaccaccaccaccatcatcaccaccacc
atctcctaccccgaagccaatcaagactctgcgcccagcactgaacctgcagctcatgat
tctcgagccggagaaggagcgcccaggacggtggaccacgccgtgattggaggagtggtg
gccgtggtcgtcttcgcgatgctgtgtctactcatcgtgttggggcgctacttcgcaaga
cacaaaggtacctacttcacacacgaagccaaaggagcagacgacgcggcggacgcagac
acagccatcatcaacgcagagggtggccacaccaactcggacgaaaagaaggagtactac
atctaa
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