KEGG   Hippoglossus stenolepis (Pacific halibut): 118122064
Entry
118122064         CDS       T08308                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsp03019]
    118122064 (larp1)
Messenger RNA biogenesis [BR:hsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118122064 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 118122064
NCBI-ProteinID: XP_035034392
LinkDB
Position
15:13827952..13875857
AA seq 1111 aa
MATQVEALLPGNPLAQAEEHGKVARGEPEEEEGGRGDGAKRQTGVDDQGSSSGGGGGGGP
GQGGSPGAEEQTSKQATEEDKGGCDSEDKQTEEGVTGSRKEFTEAPPPKVNPWTRKMNAV
TVVSVNGQAHHESTGPAKVVKAGNPPKARRGGKVGDFADANSWPTPGEIATKDMQIEAVT
RTVSCPPTVRQVRDSTRFSVPKRTMTKKESKDKSNEESKENLKAKSDDSGEEKNGDDDSQ
KNGPKKKGNKQKWVPLMIEVKSEGPRERSASRNNSRQNENPRLPPNARNDLRDWHSQKYE
REWRDDHDEVSSVKSEGAPFRGGFRGRGRGRGRGRGRGRGSGRGHYDYHYSYKSYDMKDG
PHGQKFGNAMTYYYDNMSSNDMFSVDQDLLKDYIKKQIEYYFSLDNLERDFFLRRKMDDE
GFLPIPLVASFHRVKALTTDVNLIMESLKDSKEVEVIDMKIRRKVDPEKWPLPGLNMPNN
THTDFSQLINCPEFVPRQMPEEPQGSPRASTPVHQLKTEPDISNLKTMPKGLSASLPDLD
SESWIEVKKRPRPSPARPKVSTEKAPSLQQQQQQQQREKDELIRSPLLQPGSTPMPATSG
NKDGAEPDEPEELDFMFDEEMAQIDGRRNTFTDWSDEDTDGEIDDHDVNKILIVTQTPPY
LRKHPGGDRTGHHTSRSKLTGELVKVINDGLFYYEQDLWDDTYEPEYATIKQEVENFKKV
HLISREEFECLTPEPPVDPKQEVPPGPPRPQQIPTDALANKLFGAPEPSSIARSLPTTVP
DSPNYRSARTPRTPRTPHRKDSTMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPMECHV
GWVMDSREHRSRTASVSSNASPSEGTPALGNIGCTPQSLPKFQHPSHELLKENGFTQHVY
HKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRYG
LECLFRYYSYGLEKKFRPDIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKAKTMAIDPK
LQECLSKFKRLEDFRIDPPMEEGGRRRHSSSGDGRRRHPSQPSSRPHSQASSGPSPAPTA
QGPTARDDAKPTSQKTPATAADPAPDTKTLK
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggctctcctgcctggcaatccgctcgcccaagccgaggagcac
gggaaagtggcccgaggtgagcccgaggaagaggagggcggacggggcgacggggccaag
cggcagacgggtgtcgacgaccaggggagcagctccggcggcggcggcggcggcggcccc
ggccagggagggtcccccggcgcggaggagcagacctccaaacaggcgacggaggaggac
aaggggggctgtgacagcgaggacaagcagaccgaggagggggtaacaggcagcaggaag
gagtttactgaagctcccccgcccaaggtgaacccgtggactaggaaaatgaacgcggtg
accgtggtcagcgtgaatggacaagcacaccacgagtcgactggccctgccaaggtggtg
aaagcagggaacccgcccaaagccagacgtggaggaaaggttggagattttgctgatgca
aacagttggccaactccaggggagatcgcaaccaaagacatgcagatcgaggcagtgaca
cggaccgtgtcctgcccgccgactgtcaggcaggtcagagactcaacgagattcagtgtc
ccgaaaagaacaatgaccaagaaggagtcaaaggacaagagcaacgaggagagcaaggag
aacctgaaggccaagtcagacgactctggagaggagaagaacggcgacgacgactcccag
aagaacggcccgaagaaaaaaggaaacaagcagaagtgggttcccctgatgatcgaggtg
aagtccgagggtcccagggagcgctcggcctccaggaacaacagcaggcagaacgaaaac
ccccgcctccctcccaacgccaggaacgacctcagagactggcacagtcaaaagtacgag
cgtgagtggcgtgacgatcatgacgaggtgtcaagtgtgaagagcgaaggggcgccgttc
cgcggtgggttcagaggtcgtggacgtggaagaggaagaggccggggacgaggcagaggt
agcggtagaggccactacgactaccactacagctacaagtcctacgacatgaaggatgga
ccccacggtcagaagttcggcaacgctatgacctactactacgacaatatgagcagcaac
gacatgttctccgtcgaccaggacctgctgaaggactacatcaagaagcagattgagtac
tacttcagcctggacaacctggagcgggacttcttcctgcggaggaagatggatgatgag
ggcttcctgcccatcccactcgtcgccagcttccacagagtgaaggccctcaccaccgac
gtcaacctcattatggagtctttgaaggacagtaaggaagtggaggtgatcgacatgaag
atccgtcggaaggtggaccccgagaagtggcctctcccgggcctgaacatgccaaacaac
acccacaccgacttctcccagctcataaactgccccgagtttgtcccgagacaaatgcca
gaggagccccaaggttctccaagggcctctacaccagtgcaccaactgaagactgaaccg
gacatctccaacctcaagacgatgcctaagggcctctccgccagcctccctgacctggac
tccgagtcctggatcgaggttaagaagaggcccagaccctccccggccagacccaaggtc
agcacagagaaggccccctcgttgcagcagcagcagcagcagcagcagagggagaaggac
gaattgattcgttccccgttgctgcaacccggctccacaccaatgcctgctacctcagga
aataaggacggagccgagccggacgaaccggaagagctggacttcatgttcgatgaggag
atggcgcagattgacggccggcgcaacaccttcaccgactggtcggacgaggacacggac
ggcgagatagacgaccacgacgtcaacaagattctgattgtgacgcagacgccgccctac
ctgaggaagcacccagggggcgaccgcacaggacaccacacgtcgcgctccaagctgacc
ggcgagctggtcaaggtgatcaacgacgggctcttctactacgagcaggacctgtgggac
gacacgtacgagcccgagtacgccaccatcaagcaagaggtggagaacttcaagaaggtc
cacctgatcagccgcgaagagttcgagtgcctgacccccgaaccccctgtcgaccccaaa
caggaagtcccgccaggcccaccccgacctcagcagatccccacagatgctttggcaaac
aaactcttcggtgcccctgagccctcctccatagctcgctctctcccgactactgtgcct
gactcacccaactaccgcagtgcccggacgccacgcacgcctcgcacccctcaccggaag
gactccaccatgacgccgcgcttctacccagtggtgaaggaaagtcgacctgttgatgcc
aagacgcccaggaagaggaagacccgacacagctccaacccgcccatggagtgtcacgtt
ggctgggtgatggactccagagagcatcgctcacgtacggcctcagtcagctctaacgcc
agcccatcagagggcactcctgccctgggtaacatcggctgcaccccccagtccctcccc
aagttccagcacccgtcacacgagctgctcaaggagaacggcttcacgcaacacgtctac
cacaagtaccgccggcgctgcctaaatgagcgaaagcgactgggaatcggccaatcgcag
gaaatgaacacactcttccgtttctggtcctttttcctgcgagatcatttcaacaggaag
atgtacgaggagttcagacagctggtggtcgaggatgggaaggaaggatacaggtacggt
ttggagtgcctcttcaggtactacagttacggtctagagaagaaattcagaccagacatt
tttaaggatttccaagaggagaccatgaaagactacgaggctggtcagctttatggactg
gagaagttctgggccttcctcaaatactccaaagctaaaaccatggcgatcgatcccaag
ctgcaggagtgtctgagcaagtttaaacgtctggaggatttcaggatcgatccgcctatg
gaggaagggggtcgcagaagacactcgtccagcggcgacggtcgccgcaggcacccatcc
cagccctccagtcggccccacagccaggccagctcaggccccagccctgcccccaccgcc
cagggccccacagccagggatgatgccaaacccaccagtcagaaaacccccgccacggcc
gctgaccccgcaccggacaccaagacgctgaagtaa

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