Hippoglossus stenolepis (Pacific halibut): 118122072
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Entry
118122072 CDS
T08308
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hsp01006
]
118122072 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118122072 (chm)
Prenyltransferases [BR:
hsp01006
]
Protein prenylation
Rab geranylgeranyltransferase
118122072 (chm)
Membrane trafficking [BR:
hsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118122072 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
118122072 (chm)
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
CDC45
Merozoite_SPAM
Sigma70_ner
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
118122072
NCBI-ProteinID:
XP_047199433
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Position
15:complement(24882831..24895759)
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AA seq
586 aa
AA seq
DB search
MAAEDLPSEFDVVILGTGLVESVVAAACSRVGQRVLHVDRRSYYAANWASFTFNSLLTWI
QQHHEESQPEPVQDWSSLLEEGEELIYLCNSDSTSVTNLQVFCFTSEEDEEEEEEEEEEA
PDPPDTTEEEAEDADKERKEEVAEGEEEEQAAQTVGEEPETAQSRLSVPQRQSEPMRKKI
SYAQLVKEGRRFNIDLVSKLMYSRGSLVDLLIKSNVSRYAEFKNVSRILTYRHDNVEQVP
CSRADVFASRQLSVVEKRKLMRFLTFCVEETEEQQAYNGRPYLEFLRDQQLGDNLQHFLV
HSIAMVTEDTPTEAGLASTRHFLRCLGRYGNTPFLFPVYGLGEIPQCFCRMCAVFGGIYC
LRHSVHCLIVDKESNRCKAVIDIRGQRISCSHFVVEDGYVAAERKKVATPTRFISRAVLI
TDGSVLPTDSEQQVSMVTLPPIAAGCPSVKMVELCPSTMTCLPGTYLVHLTCQSTGSAYQ
DLSPLVTRMFHTPESHDQGKRPSVLWCLYFNMVDGSAVEVDCHNLPSNVHVCSGPDGELG
HEHAITQAEMIFQKILPQEEFCPPAPNPEDIIYDAEGDGLSRQTEE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaggatctaccgtctgaatttgacgtcgtcattctgggcacagggctcgtg
gagtcggtggtcgctgctgcctgttccagggtcggtcagcgagttcttcatgtcgacagg
aggagttactacgcagccaactgggccagcttcaccttcaacagcctgctcacctggatc
caacagcaccatgaggagtctcagcccgagccggtccaggattggtcgagcctgttggag
gaaggggaagagctgatctatctgtgtaactctgactccacctccgtcactaacctgcag
gttttctgtttcaccagtgaagaagacgaggaggaggaggaggaggaggaggaggaagct
cctgatcctccagacaccacagaagaagaagctgaggacgctgacaaagaaagaaaagag
gaagtggctgaaggagaagaggaagaacaggctgctcagactgttggggaggagccagag
acagctcagtcccgcctctctgtccctcaacgccaatcagagccaatgaggaagaagatc
agctacgctcagctggtgaaggaaggacgcaggtttaacatcgacctcgtctccaagctg
atgtattctcgtggctcattggttgatctgctcatcaagtcaaacgtcagtcgttatgca
gagttcaagaatgtcagtaggatactcacctatcgccatgacaacgtggaacaggtgccc
tgtagtagagctgatgtgtttgcgagtcgtcagctttccgtggtagaaaagaggaagttg
atgcgtttcctcactttctgtgttgaggagactgaggagcagcaagcttacaacggtcgg
ccatatttggagttcttgcgtgaccagcagcttggagacaacctgcaacacttcctcgtc
cactctattgcaatggtgacagaggacacacccacagaggcggggcttgcttccacacgt
cacttcttgcgctgcctgggtcgctacggcaacacgcctttcctgtttcctgtctatggc
cttggagagataccgcagtgtttctgtaggatgtgtgctgtgtttggaggaatctactgt
ttgagacactcggtccattgtctgatcgtcgacaaggaatccaacaggtgtaaggcggtg
attgatatcagaggacagcgaatcagctgcagccactttgtggtggaggacggctatgtg
gcagcagagaggaagaaggtggccacacccaccaggtttatcagcagagccgtcctgata
actgacggctccgttctgcccactgactctgagcagcaggtttccatggttacgcttcct
ccaatagcagcggggtgtccgtcggtgaagatggtggagctctgtccgtccacgatgacg
tgtttaccaggaacctatctggtccacctcacttgtcagtcaactggctccgcctaccag
gatctgtcgccactggtaaccagaatgttccacacaccagagtcacatgaccaaggcaag
cgtccgtctgtcctctggtgtctgtacttcaacatggtcgacgggtcggcggtcgaggtc
gattgtcacaacctcccatcaaacgtgcacgtgtgttctggaccagatggagagctgggc
cacgaacacgccatcacacaggcagagatgattttccagaagattctccctcaggaggaa
ttctgtcctccagctccgaaccctgaagacatcatctacgacgcagagggggacggcctt
agtcgtcaaactgaagagtaa
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