KEGG   Hippoglossus stenolepis (Pacific halibut): 118122117
Entry
118122117         CDS       T08308                                 
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
hsp  Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:hsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsp04121]
    118122117 (brwd3)
Ubiquitin system [BR:hsp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     118122117 (brwd3)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Bromodomain WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Auxin_resp Beta-prop_VPS8 BBS2_Mid WDR54
Other DBs
NCBI-GeneID: 118122117
NCBI-ProteinID: XP_035034481
LinkDB
Position
15:9269671..9283986
AA seq 1807 aa
MAREQCSQTEAELYYLIARFLQSGPCKKAAQILVEELEEYELVPQRWSWDGLKYKRNFQD
WVSLNQHIPADYLLRVCQRIGPLIEKEIPPSVPGVQTLLGLGRQSLLRTVKSCSHKVCSG
SAVAALHRGRPPEPPVSDGNAPSVVSIMGARQATGTARFGQALPSSSYQHMKIHKRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEICDMAVNHENTLIAS
ASCDKTIRVWCLRTCAPIMVLQAHAASITSIQFCPAVKGTTRYLASTGADGMVCFWKWHS
LSMKFNDQPVKFVERSRPGVQVSTSSFSSGGMFMATGGTDHMIRVYYLGAETPMKVSEMD
AHTDKVVVVQFSNNSDSLRFVSGSRDGTVKIWHYQQQEWKSVTLDVAARLPGSTVANGDD
KTKLVVTMVAWDRADTTVITAVSNYLLKVWSTTSGQLLHVLSGHDDEVFVMEAHPFDSRI
MLSAGHDGNIYLWDLTKGTKIRNFFNMIEGQGHGAIFDCKFSADGQHFACTDSHGHLLIF
GFGCSRAYEKIPDQMFFHTDYRPLIRDTNSYVLDEQTQQAPHLMPPAFLVDVDGNPHPPL
YQRLVPGRENCKEDQLVPQLGYMANNEGELVEQVLGQQTAENGENILDNLIRQLQNEQDV
RQNPEEPAEEAEADDAAVDVDSSSTDGQHRSTQMDSVWQMQHNALRSQVATERDLLAWSR
RVMVNEMPHGVFRVMEECRRAKGDMECSLYNAERKKKPVTCSPKSDLLASRLRSRRPTKK
RQQRHAYQTRSAQVRRPGTRSRTSSNRHSSDSQIDSDSDGEAAEQAEQSEPSSEAEAQWQ
SESSSSDSSSEYSDWTADAGINLQPPKRPTRRSVQPTGYSSSEEEEEGEDKEKEPRRKEN
EKKKKKPKETKQKPTSSLAGLNAEEWLPPSWIMETIPHRSPFVPQMGDELIYFKQGHQAY
VRAVRRAKAYSINPQKQPWNRLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLDAVSGKMT
NESFSLKYHDMPDVIDFLVLQQCYNEAKEHNWQPGMRFRSIIDDAWWFGSVEDQEPLQPE
YPDSLFQCYAVKWDNSEREKMSPWDMEPIPEEAALPDQVGDGVEVAEEELKALLYRPQEG
EWGAHTRDEDCERVLHGIDQLLTLDVAKAFASPVNLRDYSLYCTVVAYLTDLSTVHKRLE
NRFYRRISALMWEVRYIEHNARTFNEPESPIVAAAKVVTDVLLHYIRDQSCTDILDLYRK
LNCEISSGGEAEELDVDSDNPGTSTGHRGANSNSTTRGVALDVEVWHGQCQKLVRRMIVS
QDSEPFRQAVDLFEYPDYRDIIDTPMDLGTVSETLAAANYENPMEFAKDVRLIFSNSKAY
TPNKKSQIYTMTLSLSAFFEKHIISIISDYKSALQHERRNRQRLSYRSRLHNGGSSPPVS
PSPSSKGKHKSGKVSKPKKSQTSSRTRSQRPRKAQQSSSVAKEEDSQPSSPSSGTSSGSR
NQGPQCLTRSQATPAKKSGRKSNLHQSNGSRQRPGQEVLQSDNDEEASGSNSSASDSSSS
SSSSSSSSSSDSENSSDSEEEKYMEGGDHDYSKAPCLSIRLPAEGKVAASGKRRHKGGED
LAQMPKRARVQILVEEEEEEGEEEEEEEEKDDDEEEDDEEEEEEEEEQEQEQQQQQPVAV
SQEEDEEEEDEEEPEEEEPEEEEPEEEEPEEEEDEDEDNSDEAQSGSAAAATTVALAAGS
SPRGNQCKSRRVNTRNQGRRTVLYRDESEDDGHGSKDDPLNLGMSRSGRVRRMTEKARVS
HLMGWSH
NT seq 5424 nt   +upstreamnt  +downstreamnt
atggcaagagaacagtgttcacagaccgaggctgaactgtactacctcattgccagattc
ctgcagtccgggccgtgtaagaaagcagcgcagatactggtcgaggagctggaggagtat
gagttggttcctcaacgatggagctgggacggactgaaatacaagcggaacttccaggac
tgggtgagtttgaaccagcacattcctgcggactatctgctgcgtgtttgtcagcgaata
ggcccgctcatagagaaggagatcccacctagtgttcctggagtccaaacacttctgggt
ctgggaagacagtcattacttcgcactgtcaaaagttgtagccacaaagtatgcagtggc
tcagctgttgctgcactgcaccggggacgtccaccagaacccccagtcagcgatggaaac
gctcccagtgttgtgtccatcatgggtgctcgccaggccacaggtacagctcgttttggc
caagctttgccgtcttcctcctaccaacacatgaagatacacaaacgtatccttggccac
ctatcctcggtctactgtgtagcatttgaccgcactggtcgtcggatatttacgggttca
gatgactgcctggtgaaaatctgggccacagatgacggccggctcctggcaacacttcgt
ggccatgcagcagagatctgtgacatggctgtcaatcacgagaatacgctcatcgcctca
gccagctgtgacaaaacgatcagagtgtggtgcctacgtacatgtgcacccatcatggtt
ctgcaggcccatgctgcctccatcacatccattcagttttgtcctgctgtcaaagggaca
acgcggtacctcgcctccacaggtgcagatggtatggtgtgtttctggaagtggcactcg
ctcagcatgaaattcaatgatcagccggtcaagtttgttgagcggtcacgtccaggagta
caggtctccacttcctccttcagtagtggtggtatgttcatggcaactggtggcactgat
cacatgatcagagtctattaccttggtgctgaaactcccatgaaggtgtctgagatggat
gcccacacggacaaagttgtagtcgtccagtttagcaataacagtgacagcttaaggttt
gtaagcggcagtcgtgatggcacagtcaagatctggcattaccagcaacaagagtggaag
agcgtcactttagacgtggctgccaggctgcctgggagcactgtcgccaatggggatgat
aaaacgaagctggtggtgaccatggtggcttgggaccgtgcagataccacagtcatcaca
gcagtttcaaactacctactcaaagtgtggagcacaacatctggacagctgctgcatgtt
ttatctggtcatgatgatgaggtgtttgtgatggaggctcacccgtttgactcccgcatc
atgctatcagccggccacgacggcaacatttacttgtgggacctgacaaaaggaaccaag
atccgcaacttcttcaacatgattgaagggcaaggccacggtgctatttttgactgcaag
ttctcagctgatggacaacattttgcctgcactgactctcacggccatttgctcatcttt
ggcttcggctgcagcagagcatatgaaaagattcctgaccagatgttctttcacacggac
taccggcctcttattcgggacactaatagctatgtcctggatgagcagacacaacaggcc
cctcacctcatgcctccagccttcctcgtggacgttgatgggaatcctcaccctcctctc
taccagcgcctggtgccaggaagagagaactgcaaggaggatcagctcgtacctcaactt
ggctacatggctaacaacgaaggagagttggttgagcaggtacttggtcagcaaacggca
gaaaatggagaaaacatattggacaatctcatcagacagttacagaacgagcaggacgtg
cgtcagaatcccgaagaaccggctgaagaggcagaggctgatgatgcagcagtggatgtg
gactcctcttcaactgatggacaacacagaagcacgcagatggacagtgtttggcagatg
cagcataatgccctgcgtagtcaagttgctacagagagggacctgctggcctggagccgc
agggtgatggtcaatgaaatgccgcatggggtattcagagttatggaggagtgcagacga
gccaaaggtgacatggagtgttcactttacaatgcagagaggaagaagaaaccagttaca
tgttcacccaagagcgatctactggcctcacggctccgctcccggcggccaactaagaaa
aggcagcagcgccacgcctatcagacccgctcagctcaagtccgccgtcctgggaccagg
agtcgaacttccagcaaccgacatagctctgacagccaaatagattctgacagtgacgga
gaagcagcagaacaagcagagcaaagtgaaccctcctctgaggctgaagctcagtggcag
agtgaaagcagctccagcgactcctcgagtgagtattctgattggacagccgatgctggt
atcaacctccagccgccaaagcgaccaaccaggaggtccgtacagccaacaggttacagc
agctccgaggaggaagaagaaggcgaagacaaggaaaaggagcccaggaggaaggaaaat
gagaagaagaagaagaagcccaaagagaccaaacagaaacccacgtcctctctggccgga
ctcaatgcggaggagtggctgccaccctcatggataatggagaccattccacaccgttct
ccgtttgttccccaaatgggagatgagctcatctacttcaaacagggccatcaagcctat
gtgcgggcggtccgcagggccaaggcctacagcattaaccctcagaaacagccatggaac
agactcaacctcagggaccaggaatctgtaaaggtggttggaatcaagtatgaagtggga
cctcccaccctttgctgcctaaaactggctttcttggatgcagtctcagggaaaatgacc
aatgagtctttctctttaaagtaccatgacatgccagatgtcatagattttctggtactg
cagcagtgttacaacgaggctaaagagcacaactggcaaccaggcatgaggttccgcagc
atcattgatgacgcctggtggtttggttctgtcgaggaccaggagcctctgcagcctgag
tatccagacagcctgtttcagtgctatgctgtaaagtgggataatagtgagcgggagaag
atgagtccctgggacatggagcctattcctgaggaagctgcattacctgaccaggtgggt
gatggggtggaggtggcggaggaggagctgaaagctctgctctacagacctcaagaagga
gaatggggagctcacacacgggatgaagactgtgagcgagtcctccatggcatcgatcag
cttcttactctagacgtcgcaaaggcttttgcatcaccggtgaatctgcgggactactct
ctgtactgcactgtggtggcttacctcactgacctcagcaccgtccacaaacgactcgag
aaccgcttctacaggcggatctctgcattaatgtgggaggtgcgctacattgaacacaat
gcccgcacttttaacgaacccgagagccccattgtagcagccgcaaaggtggtgactgac
gttctcctgcactacatcagggaccagagctgcacagacatcttggatctgtatcgcaaa
ctcaattgtgagatcagcagtggaggggaagctgaggagttggacgtcgactctgacaat
cctgggacatctacaggacatcggggagcaaactcgaattctacgacccgtggtgtggct
ttggatgttgaagtatggcacggtcaatgtcaaaagctggtgcgtcgcatgatcgtctcc
caagattcagaacccttcagacaggctgtggatctcttcgagtatccggactatcgggac
atcattgacactcccatggatctgggaacagtgtcggagacgctcgccgcagccaattat
gaaaacccgatggagtttgccaaagacgtccgcctcattttcagcaactcaaaagcttac
actcctaacaagaaatcacagatctacaccatgaccctcagcttgtcagccttctttgag
aaacacatcatctccatcatctccgactacaagtccgcccttcagcacgaacggcggaat
cgtcagagactcagttacaggagcagacttcacaatggaggcagttcaccgcctgttagt
ccatcccccagctctaaagggaagcacaagtcagggaaggtgtccaaaccaaaaaagtcc
cagacctcatcaaggactcgttcacagagaccacgtaaggctcaacaaagcagcagtgta
gcaaaggaggaagacagccagccttcttccccaagttcagggacgagcagcgggagcagg
aaccaagggccgcaatgcttgacccgcagccaagccactccagcgaagaagtcagggcgg
aagagtaatctgcatcagagcaacggctccagacagcgccctgggcaggaagtgctgcag
tcagacaacgatgaggaggcgtccggatctaacagctccgcgtcagactcgtcgtcatcc
tcctcgtcgtcatcttcctcctcatcatcggacagcgagaacagctctgattctgaggag
gagaagtacatggaggggggagatcacgactacagcaaagccccctgtctatctatacgt
ctgccggctgaaggtaaggtggcggcctcagggaaacggagacacaaaggaggagaggac
ctggcacagatgcctaaaagagcacgtgtgcagattcttgtagaggaagaggaggaggaa
ggggaggaggaggaggaggaggaggagaaagatgatgatgaggaggaggatgatgaagag
gaggaggaagaagaagaagaacaggaacaggagcagcaacaacaacaaccggtggctgta
agtcaggaagaagatgaggaggaggaggatgaggaggagccagaagaggaggaacctgaa
gaggaggaacctgaagaggaggaacctgaagaggaggaagatgaagacgaagacaactct
gacgaggcacagagtgggtccgcagcagcagcgacaacagtagcattagcagcaggtagc
agtccaagaggcaaccagtgcaagtctcgacgggtcaacacgcgcaaccagggccgcagg
acagttctgtacagggacgagtcagaggacgatggccatgggtcgaaggatgaccccctc
aacctgggcatgtcccgctcaggacgggtacggcgtatgactgaaaaggcccgtgtcagc
cacctcatgggctggagtcactga

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