Hippoglossus stenolepis (Pacific halibut): 118122170
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Entry
118122170 CDS
T08308
Symbol
capn5b
Name
(RefSeq) calpain-5
KO
K08574
calpain-5 [EC:3.4.22.-]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118122170 (capn5b)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C2: calpain family
118122170 (capn5b)
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Motif
Pfam:
Peptidase_C2
Calpain_III
C2
Motif
Other DBs
NCBI-GeneID:
118122170
NCBI-ProteinID:
XP_035034609
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Position
15:21471459..21501720
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AA seq
642 aa
AA seq
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MFTSVKAFEGQQYSTLKRQCLQSGLLFEDPRFPAFDDSLFIHGNRIGRVVWKRPRELCED
PHLFVDGISAHDLHQGQLGNCWFVAACSSLASRESLWQKVIPDWKEQEWDTEKPESYAGI
FHFRFWRFGEWVDVVIDDRLPTVDNQLVYCHSNDSNEFWSALVEKAYAKVYGCYEALDGG
NTADALVDFTGGVSEPVDLLEGQMATDEVARNQLFERVLKVHNRDGLISCSIRATTIEDM
EARLDCGLVKGHAYAVTDVRKVRLGHGLLAFFKSEKLQMIRMRNPWGEKEWSGPWSDSSE
EWNKVSKSEREKLGVTVQDDGEFWMTFDDFCQYFTDLILCRLINTSYLSIHKTWEEEVMR
GSWVHRQDPLRNRSGGCINHKATFLQNPQYVFDVKKVEDEVLICLQQKEKRATPKEGKGE
NLAIGFDIHRVELNRKYRMHSAQQKVAGSIYINSRCVFLRKELKEGRYVIIPTTFDPTQQ
GEFLLRVFTDVPSDCKELTLDDPPQTCWTGMCGYPQLVTQVHVLNAEGLQGQDSNGAVDP
YVIITCEGERVRSPVHKDTRCPNFDIKGLFYRKKPKEGIHIEIYNKNMIVDTFLGQVIMF
SDPNERQEQLTLHLRDKGNRQDNDLPGTLTVRLITSTTLTNI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttcacttcagtgaaggccttcgaggggcagcagtactccaccctgaagaggcagtgc
ttgcagagtggcctgctcttcgaggacccccgcttccccgccttcgacgactcgctcttt
attcacggcaacaggatcggacgcgtggtgtggaagagacctcgggagctgtgtgaggac
cctcacctgtttgttgatggcatcagtgcccacgacctccatcaggggcaactgggtaac
tgctggttcgtggcggcgtgctccagtctggcgtccagagagtcactgtggcaaaaggtc
atcccagactggaaggagcaggagtgggacacagagaagccagaatcctacgccgggatt
ttccacttccgcttctggcgctttggcgagtgggtggatgtggtgattgacgaccggcta
ccgacggtggacaaccagctggtctactgccactccaacgacagcaatgagttctggagc
gccctggtggagaaggcctatgccaaggtttatggttgctacgaggctttggacggggga
aacacggccgacgctctggtggacttcaccgggggcgtctcggagcccgtggacctgctg
gagggtcagatggcgacggacgaagtggcccgtaaccagctgtttgaacgagttctcaaa
gtccacaacagggacggcctcatcagctgctccatcagggcgaccacgatcgaggacatg
gaggcacggctggactgcggcctggtcaaaggccacgcgtacgctgtgaccgacgtacgg
aaagtgcggctgggtcacggactgctggccttcttcaaatcggagaagctgcagatgatc
cgcatgaggaacccgtggggggagaaggagtggagtggcccgtggagcgacagttcggag
gagtggaacaaagtgagcaagagcgagcgggagaagctgggagtcacggtgcaggacgac
ggcgagttctggatgacgttcgacgacttctgccagtacttcaccgacttgatcctgtgt
cgcctcatcaacacgtcctacttgagcatccacaaaacctgggaggaggaggtgatgagg
ggctcctgggtccatcgccaggaccccctccgcaaccggtcggggggctgcatcaatcac
aaggccaccttcctgcagaaccctcagtatgtgtttgatgtgaagaaggtggaggatgag
gtgttgatctgcttacagcaaaaagaaaagagagcaacacccaaagagggaaaaggggaa
aacctcgccattggcttcgatattcaccgggtggagctcaatcggaagtaccgtatgcac
tcggcccagcagaaagtagcgggctccatctacatcaactcgcgctgcgtcttcctcagg
aaggagctgaaggagggccgctacgtcatcatccccacgacgtttgacccgacgcagcag
ggcgagttcctcctgcgtgtcttcactgatgtgccttcagactgcaaagagctgaccctg
gacgaccctcctcagacgtgttggacggggatgtgcggctaccctcagctggtcactcag
gtccatgtactgaacgccgaggggctgcaggggcaggactccaacggagctgtggatccg
tacgtgatcatcacctgtgagggggagagggtccgttctccggttcacaaggacacacgg
tgcccaaactttgacatcaaaggcctgttctaccgcaagaaacctaaagagggcatccac
atcgagatctacaacaagaacatgatcgtggacaccttcctgggtcaggtcatcatgttc
agcgaccccaacgagcggcaggagcagctcacgcttcacctccgcgacaagggcaaccgc
caggacaacgacctcccgggcacgctcactgtgcgcctcatcacctccaccacgctcacc
aacatctga
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