Hippoglossus stenolepis (Pacific halibut): 118122191
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Entry
118122191 CDS
T08308
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04140
Autophagy - animal
hsp04148
Efferocytosis
hsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118122191 (vps11)
04148 Efferocytosis
118122191 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118122191 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118122191 (vps11)
Membrane trafficking [BR:
hsp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118122191 (vps11)
Hops complex
118122191 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
zf-ANAPC11
Beta-prop_EML_2
ADIP
zf-RING-like
TSGP1
ToxA_N
zf_RING_Vps8_fungal
Kbp-5
Motif
Other DBs
NCBI-GeneID:
118122191
NCBI-ProteinID:
XP_035034651
LinkDB
All DBs
Position
15:938681..956901
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AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPVDNGKNCVLPSGVSACDSGRGHIVLGDMDGKIWLMTRSL
QLTFFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLGVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGSSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCGLRCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAKWHRGYLFLLIRDAKSPNKAGFGSRESSPSEKQLLTIYD
LDNKFIAYSSSFDDVVDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSDSEVHFDVEIAIKVLRQA
GYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESTMKHYGKTLMHHV
PEGTTLLLKGLCTTYQPSGDAGEKGSPERSRVNKANSEEFIPVFANNPRELKAFLEHMIE
VDPRSSQGVYDTLLELRLQDWAHEQDPERKKVLQGEAVSLLRSDHTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
AYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKICQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFSRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
LPGSKTVGNLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttcttacagtggaggaaatttgtcttcttcgacaaagacacggtgaaggat
ccggtggataatgggaagaactgtgttcttccgagcggagtctcggcctgtgactcgggc
cgtggccacatcgtcctgggagatatggatggcaagatctggctcatgacgcgctccctg
cagctgaccttttttcaggcctacaagctgcgagtgacacacctttaccagctgaagcag
cacagcatcctggtgtcagtggggcaggatgaacaaggaataaaccctctagtaaaggtc
tggaacctagacaagagagacagtggaaatcctctctgcaccaggatttttcctgcgatt
cctggcaacaaaccgactgaagtgtcttgcctcggtgtgcacgagaacctcaacttcatg
gccatcggcttcacagatggcagtgtggttttgaccaaaggtgacatcaccagggatcgc
cacagtaagactctaacactgcacgaggggagcagcccagtcactggcctcgccttccgc
caagtggcaaaggtcacacatctgtttgttgccactctggagaaggttcattgctacacc
ctgtccatcaaggagtatccaaaagttgagcttgatacacatggctgtggactccgctgc
tcctcgcttgcagatccttcccaggattcccagttcattgtggctggtgatgaatgcgtg
tacctgtatcagcccgatgagcgagggccctgcttcgccttcgatggacacaagctactc
gccaagtggcaccgaggttacctgtttttactcatcagggatgcaaagtcaccaaacaag
gcagggtttggtagcagggagagctctccatcagaaaaacagcttctcaccatctatgac
ctggacaacaagttcatcgcctacagttcctcttttgatgatgtcgtcgatgtggtggca
gagtggggctccttttacatcctaaccagggatggaaaaatgtttgttcttcaagagaaa
gacacacagaccaagctggagatgctgtttaaaaagaacctgtttgtgatggccataaac
ctggctaagagccagcacctggacagtgacggcctgtcagagatcttcaggcagtatggg
gaccacctctatttaaagggagaccatgacggtgccatccagcagtacattcgcaccatt
gggaaactggagccatcgtacgttatcaggaaatttctggacgcacagaggatccacaac
ctgacggcatatctgcaggccctgcacaggcagtcactggctaacgcagaccacaccaca
ctgctgctgaactgttacacaaagctgaaggacagctccaagctggaggagttcattaag
agtagtgacagtgaggtccactttgatgtggagattgccatcaaggttctaaggcaggcc
ggctaccacagtcacgctgttttcttggctgagaagcacatgcaccatgaatggtacctg
aagatccagctggaggacctcaagaattatcaggaagggctacgttacatcggacgtttg
ccttttgaacaagctgaaagcaccatgaagcattacggcaagacgctgatgcaccatgtt
cctgaaggcaccacactgctcctgaagggcctgtgcaccacctaccagcccagtggagac
gctggtgaaaaaggcagcccagagaggagtcgcgtcaataaggccaactctgaggaattc
atcccagtttttgcaaacaaccctcgagaactgaaagccttcctggagcacatgatcgag
gtggacccccgttcttcccagggtgtgtatgacacactgctggagctccggctgcaagac
tgggcacatgaacaggacccagagagaaaaaaggtcctgcagggggaggcggtgtcactg
ctgaggagtgaccacactgtgtttgacaaagccctggtcctgtgccagatgcacaacttc
aaagaaggcgtcctctacctttatgagaagggcaaactgtaccagcagataatgcactac
cacatgcagaatgaagagtatggaaaagtggtagaggcctgcaagcgctatggggatcaa
gagggttgcctctgggagcaggcacttggatactttgctagaaaagaagaggactgcaag
gcctacatcagtgaggtcctacatcatatcgaccaaaacaacctgatgcctcccttactt
gtggtgcagacactggcacacaactcgacggccactctctccgtcatcaaggactacctc
atcaacaagctgcagagggagagccagcagatagaggacgatgaacgcaaaatctgccag
taccgagaggaaactgctcacctccgttctgagatccaggagctcaaaacaagtgccaag
atattccagaagaccaagtgcaacatgtgcaacagtcccctggagctgccctctgttcat
ttcctgtgcagtcactccttccaccaacactgcttcgaaagctacgctgagagtgaggct
gagtgcccaacgtgcacccctgagaaccgaaaagtcatggacatgctgcgtgcacaggac
cagaaacgcgacctgcacgaccacttcagcagacagttacgcagctccaacgatggtttc
tcagtggtggctgactattttggtcgaggagtgttcaacaaactgactctggtcactgac
ctgcctggcagcaaaacagtcgggaatctagaagtcaacctgcagagagacctgctcatc
cacaccaagaggaactgctag
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