Hippoglossus stenolepis (Pacific halibut): 118122220
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Entry
118122220 CDS
T08308
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118122220 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsp01009
]
118122220 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118122220 (ncor1)
Protein phosphatases and associated proteins [BR:
hsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118122220 (ncor1)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
118122220 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
118122220
NCBI-ProteinID:
XP_035034700
LinkDB
All DBs
Position
15:6358978..6410248
Genome browser
AA seq
2412 aa
AA seq
DB search
MSSSSGYPTSQGSFSSEQSRYPSHSVQYTFTGTRHQQDFTVPDYRTHMQDAQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSITAQADHDALDSKRPRMDSVAEGHITRNPSTAGGIVL
PMPHTLQDSLRAGVDVKKESQFSVKVESHSQGGHTLHMGEDQDNSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPMEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKVLEGYGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQNI
CQRYDQLMEAWEKKVDRMENNPRRKAKDGRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLTDDP
MKVYKARQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEEKADEKTEEEKSEKSEKKEDEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRQTVTTRSMANEAATVAAEEAPP
SSSEPALPDPPQLPKADPAQRAMKEGAKTPVSAMDANKAGAAETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LATASPDDDEDNADDSEGGDNSSDTESAPSPSQTDSSKSGDSKNAAGDAQCSDQDKGQGS
NGKAPETSYGGLCVKEEKSPESETGSQEEKTRVAPYPGSVHPKTEPQDVDMKTGEVQVKM
EPEMKENREKGDHGEMHRDLHSDNDSSATCSADEDVEAEPERQRIFSMDKPSLLNPPGTV
LVSSPKQVQLNIQQLHQRAASIPAMLPGPFGPGGVPISGFAMLQHQIKAVHESAHQEEKQ
RQDQADLDRRPPFNIRSPTVLDRDGKLLSYLPYDMKLALDQEAHSGLPGSPYRLSPRELS
RASPQPDPNAPSASRYSVPPVLHPAPNQLVQSMPDGVRVTFSRPSRPPNIPSPPPLIPTS
KPTDKPSFIQGGSISQGTPGTYLPPHAVYGPEGTKSAVGSISLGLPRQQDPSKPGGACSS
IQDGRGNQAKMGEGLTYRGSITQGTPALPQSSIAADLLKCTITKLATEDLNIPDKARGEQ
LAKGHVIYEGKSGHILSFDAIKNPRENTRSPRTGHEMKRSYDMMEGSMGRSHTGREGAQF
EGLISRALPREGVHGDSKERPMMTGSIMQGTPRTAAETYEDAMKYGKQIKRESPPIRSFE
GGIGKGKPYEGVNTIKEMGRSIHEIPRQELSGQDLCKTLDMSDRRVMEGSISQIHPHNQT
TIKHNVKSLITSPSKLPHSMPQLEAMERAKYEESKAIRHTSAVNSTTSVLRSTHQEASKS
QLSPGMYEDANARRTPVNYSTNPVSRGSPMLGRAAEGGMSSVKSAAHERKGAMTPTQRDN
VPAKSPVSSGDPVASHSPFDPHHRPVVPGEVYRPHLPPHLDPTLAFHRVLDPAFMFARQQ
SPTNYHNTYQLYTMENTRQTILNDYITSQQMQVIPRPDMTRGLSPREQPVAIPYPAGARG
IIDLAQMPPTILLPHPGGTGAPTLERTAYLPGAQPPFPPRAFNPTSISPGHQAHIAATAA
ANAERERERERDRERDREHQEKEREREQREREREREREMRERERDRERTNEYMRGGGPEQ
PGRPGSRGYLHSPSPLQRTQDVVIQQRPSIFQGKSVITSLMPHSAAATAAAQSNSRYSTA
ADALAALVDAAASAPQMDVSKVKENKHDREDEMASAAAARRAAEQQQQEAERRSMQSPYG
AMSLPGGKPHSAYAEGHSVGAKDKGPQTSKSRIEEELRTRGKTTITAASFIDVIITRQIA
SDKDSRERGSQSSDSSSSLSSNRYDNTGGGAIEVISPATSPVQLQQDKPEEVQQQAAAGM
RAYDMSRYRPSGEPQPSSQQPPSSQADNYSQVHKTHRVMTLADHISHIITQDFARNQDPA
QVSSSASSTFQNVVPSGSSSGRAKVPSRYSPENQVQALHHQRPSSRVSPENAPDKPRSRP
GKSPERGGRLMENYEPISPPQSYQVMDKQEAGGPPPPQRRDAENSEIRSDSRSPGSVSYL
PSFFTKLENTSPMVRSKKQEIFRKLNSSGDSDIGNAQPGTEIFNLPAVTSSSSINPRNHS
FSDPASNLGLEDIIRKALMGNLEERQEEHQGGVGAQCPINNTTGAGSDARQEANRSPSMG
KQKQGKANSRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGS
MQFPYNPLTMRILSNTPPTCISSPSIQSQQQQQQQQQQQQPQPPPSGAPVAQQRVWQSLL
SEQYETLSDSDD
NT seq
7239 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctaccccaccagccaggggagcttcagcagtgagcagagccga
tatccttcccattctgtccagtacacctttactggcacacgccaccaacaggatttcacc
gtcccagactatcggactcacatgcaggatgcacagggtcggagaagaccatcgttactc
tctgaattccaccctggaactgaaaggcctccggagagacgccatggttacgaacagcag
tttcactccatcacagcccaggctgatcatgatgcattggactctaaacgccctcgcatg
gacagtgttgctgagggccacattacccgaaacccttccactgctgggggtattgtcctg
cccatgcctcacaccttacaggacagcctcagagcaggtgtggatgtcaaaaaggaatct
cagttctctgtcaaagtggagtcccattcccagggaggacatacactacacatgggagaa
gatcaagacaattctccttccaaactatccaaagaggagctgatccagagtatggaccgg
gtggacagggagattgctaaagtggagcagcagattttcaagttgaagaaaaagcagcaa
caactggaggaggaagcagcaaagccaatggagcctgaaaaaccagtgacccctccccca
gtggagcacaagcaccgcagcatagtccaaatcatctacgatgagaacaggaaaaaagct
gaggaagcccataaagttctggaaggttatggtcccaaagttgagctgcccctgtacaat
cagccatcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctgattttgttttttaagcggagaaatcatgctcgtaaacaaagggaacagaatatc
tgccagcggtatgaccagctgatggaggcttgggagaagaaggtggaccgaatggaaaac
aaccccagacgcaaagccaaggacggcagaacacgggagtactatgaaagacaattccct
gagatccgtaagcagagagagcagcaggagcgcttccagagggttggacaaagaggaaca
ggcctttctgcaacaattgcgaggagcgagcatgaaatttctgaaatcatagatggcctg
tctgaacaggagaacaatgagaaacagatgagacagctgtcagtcatccctcccatgatg
tacgactccgagcagaggcgggtcaagttcatcaacatgaatggcctgacggatgaccca
atgaaggtgtacaaagcccggcagttcatgaatgtttggacagaacatgaaaaggagata
tttaaggagaagtttgtccaacaccccaagaactttggcctgattgcctcatatctagag
agaaagtgtgttgccgactgtgtcctatattactacttaaccaagaagaaccacaactac
aagacgctggtgaggcgaaattatggaagacggagaggaaggaaccagcaaataacgcgt
ccctcacaagaagagaaggccgacgaaaaaaccgaagaggaaaaatctgagaaatccgag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgtcgtaagggaaggcagaca
gtcaccacacgttccatggccaatgaggctgcaactgtggcggctgaggaagcacctccc
tcttcctctgagcctgccttaccagatcctccacagctcccgaaagctgatccagcacag
agggccatgaaggagggtgctaaaactccagtgtctgccatggatgctaataaagctggt
gccgctgaaaccggagaaacttctcgctggaccgaggaggagatggaggtcgctaaaaaa
gggctagttgagcatgggcgaaactggacagccattgccaaaatggtgggcaccaaaagt
gaggcgcagtgcaagaacttctacttcaattacaagagacgccacaacctggacaatctg
ctccagcagcataaacaagatacaaggcgggctcgtgctgataggtctcaaggtgaaggt
ctagccacagcatcacctgatgatgatgaggacaacgcagatgacagtgaaggtggtgac
aacagctccgatacagagagcgccccctccccctctcagactgactcatcaaagtctggt
gactccaagaacgctgcgggagatgctcagtgctctgaccaggacaaaggtcagggcagc
aatggaaaggccccagagacctcatacgggggactctgtgtcaaggaagagaaaagtccg
gagagtgagactggatctcaggaagaaaagaccagggtggctccatatcctggctcagta
catcccaaaactgaaccacaggatgtggacatgaagaccggagaggttcaggtgaagatg
gagcctgagatgaaggagaatagagaaaagggtgatcatggcgagatgcatagggatctc
cattcagataatgactccagtgccacctgcagtgctgacgaggatgtggaagcagagcct
gaaagacagagaatattctccatggataagccttcactgctcaaccctccaggcacggtg
ctggtgtcctcacccaagcaagtccagctcaacatccagcagctgcatcagagggcagct
tccatcccagccatgttgcctggtccttttggacctggtggcgtgcccatcagtggtttt
gccatgttgcaacaccagatcaaagcggtgcacgagtctgcccaccaggaggagaagcag
aggcaggatcaggcagatctggatcgcagaccacccttcaacatacgtagccccacggtg
ctcgacagagatggtaagctcttatcctacttgccttatgacatgaagctggctctggac
caggaggcccactctggtctgccaggctctccctacagactctctcccagggagctgagc
agggcctcaccccagcctgaccccaacgcccccagtgcctcccgctacagtgtgccgcca
gtccttcaccctgctcccaaccagctggtccagagtatgccagatggagttcgtgtgaca
ttcagcagacccagtcgacctcccaacattccctctcctcctccactcattccaacctcc
aagcccacggacaagccgtccttcatccaaggaggctccatctcccagggaactcctggc
acatacctcccaccccatgctgtatatggcccagaggggactaagagcgctgtgggctcc
atctctcttggtctgcctcggcagcaggatcccagcaaacctggaggtgcatgttcatcc
atacaggatggcagaggcaaccaagcaaagatgggcgagggtctgacttacagaggatca
attactcagggcacaccggccctgccccagtccagcattgctgctgacctcctgaagtgc
acaatcacaaagctggccacagaggacctgaacatcccagacaaggccagaggagaacag
ttggctaaaggtcacgtcatctacgaaggcaagagtggtcacatcctctcatttgatgct
atcaagaaccccagggaaaacacccgcagccccagaacaggccatgagatgaagcgctct
tacgacatgatggagggatccatgggcaggagccacaccggcagggaaggagctcaattc
gagggtttaattagcagagccttgcccagagaaggagtccatggagattctaaggaaaga
ccaatgatgactggatccatcatgcaaggaacacctagaactgctgcagagacgtatgaa
gatgccatgaaatatggcaaacagatcaagcgagagagcccaccgatccggtccttcgaa
gggggtattggtaaaggcaagccctatgagggggtgaacactatcaaagaaatgggacgt
tctattcacgaaatcccccggcaagaactgtctggccaggacctctgcaagacccttgac
atgtcagacaggagggttatggagggatccatatctcagattcaccctcacaaccagacg
actatcaagcacaacgtcaagtccctcatcaccagtccctccaagcttccccacagcatg
cctcaacttgaggccatggaacgggccaaatacgaggagagcaaggcaatacgccacacc
tctgcggtcaactccaccacctcagtccttcgctccacacaccaagaggcgagcaaatcg
cagctcagcccgggcatgtacgaggatgccaatgctcgcaggacccctgtcaactacagc
acgaatcccgtatccagaggttcacctatgctgggacgtgctgctgaaggtggtatgagc
tctgtgaaatctgctgcacatgaaagaaagggtgccatgaccccaacacagagggacaat
gtcccggcaaagtcccctgtgtcgagtggggaccctgtagcctctcacagccccttcgac
ccccaccaccggcctgttgttcctggggaagtttaccgaccgcacctgcctccgcatctt
gaccccaccctggccttccacagagtgctggatcctgcgttcatgttcgccaggcagcag
tcaccaacaaactaccacaacacctaccagctgtacaccatggagaacacgcggcagacc
atcctcaacgattatatcacttcccagcagatgcaagtcattcctcggcctgacatgacc
cggggattgtcaccaagggaacaacctgtcgctatcccttacccagctggagcacgaggg
attattgatctagcccagatgcctccaactatcctgttgcctcaccctgggggaacaggt
gctcccactttggaacgcaccgcctacctccccggagctcagccccctttccctcctagg
gctttcaacccaacctccatatcgccaggtcaccaagcccatattgctgcaactgctgcc
gccaatgcagagagggaaagggagagggagcgtgaccgtgagcgtgaccgcgagcatcag
gagaaggagagggagagggagcagcgtgaaagggagagggaacgggagagggaaatgaga
gaacgagagcgcgaccgggagcgaaccaatgaatacatgcgtggaggtggaccagaacaa
ccgggccggccaggaagtcgaggttatctgcactccccttctcccttgcaaagaacacag
gacgtagtgattcaacaacggccgagcattttccagggcaagagtgtcatcacctcttta
atgcctcattcagcagcagcaacagcagcagcacaaagtaactctcgctacagtactgcc
gctgatgctctggctgcattggtggacgctgcagcctctgctccacagatggatgtgtcc
aaggtgaaggagaacaaacacgatcgggaggatgaaatggcatcagcggctgccgctcgg
cgagcagccgagcagcagcaacaggaggcagaaagacgatccatgcagtccccttatggt
gctatgtctctgccgggaggtaagccccattcagcttatgctgagggccatagtgttgga
gctaaggataaaggacctcaaacatcaaagtcccgcatcgaagaggagcttcgtacccga
ggaaagacgactatcacagccgctagcttcattgatgtcatcatcacacggcagatagcg
tctgacaaagactcacgagagcgaggatctcagagctctgactcctctagcagcttgtca
tctaatcgatatgacaataccggtggaggagccattgaggtgatcagtcctgctacttcc
ccagtccagctccaacaagacaaaccagaagaagtgcaacagcaggcagcagctggcatg
cgggcctacgatatgagtcgttaccgaccatcaggggagccacaacccagttcccagcag
cccccctcctcccaggcagataactactctcaggtccataagactcaccgagtcatgacc
ttggcagatcacatttcgcatatcataacccaggactttgcccggaatcaggaccctgcc
caggtttcttcctcagcttcttcaacattccagaacgtggtgccatctgggtcctcttca
ggtcgtgccaaggtgcccagccgctacagtcctgagaaccaggttcaggccctacaccac
caaagaccctccagtagagtttcaccagagaatgctcctgacaagcccagatccaggccg
ggtaagtctccagagcgaggaggcaggctgatggagaactatgaacccatttctccacca
cagagctaccaagtcatggacaagcaggaggctggcgggccgcctccacctcagaggcga
gatgctgagaactctgagatcaggagtgactcgaggtccccgggcagcgtaagctatctg
ccttccttctttaccaagctggagaacacctcgccaatggtgagatccaagaagcaggag
atctttcgtaagttgaactcctctggtgattctgatattggaaatgcgcaacccggcaca
gagatttttaacttgcctgctgttaccagctccagcagcatcaacccgaggaatcactct
ttcagtgatccagccagtaacctgggcctggaggacataatccgcaaagcgttgatgggt
aacttagaggaaagacaggaggagcaccagggaggtgtaggggctcagtgtcctatcaac
aacacaaccggcgcaggcagtgacgcccgccaggaggcaaaccgatcacccagcatgggg
aagcagaagcagggcaaagccaacagccggaaatccaagtcacctaatttgggtcaggcc
tacgctggaggggaacgtccctcttcagtgtcctccgtccattctgagggagattatcac
agacaagcccaagcccaaccccagtggagttgggatgaccgaccctcgtccacaggatca
atgcagttcccttacaacccactgaccatgcgcatcctaagcaacacgccaccaacctgc
atatcctcaccctccatacagagccagcagcagcagcagcagcagcagcagcagcagcag
ccacagccgcctccgagcggagcccctgtggcccagcagcgcgtttggcagtctctcctg
tcagagcaatatgagaccctgtctgacagtgacgactga
DBGET
integrated database retrieval system
