Hippoglossus stenolepis (Pacific halibut): 118122221
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Entry
118122221 CDS
T08308
Symbol
utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118122221 (utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118122221 (utp6)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118122221 (utp6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_15
Phasin
Motif
Other DBs
NCBI-GeneID:
118122221
NCBI-ProteinID:
XP_035034708
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Position
2:14522957..14531121
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AA seq
595 aa
AA seq
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MAEVVQQRIEERIPELEQLERVGLFTQKEVRSIIKRVTALEYKLHRLIIKKEDFIAYIQY
EINILELVKKRRTHIRYQFKREEIEFPIIHRINSIFRRATNKWKDDVQLWFSHVAFCKKW
ATKSQISKVFSSMLAIHSDKPALWIMAAKSELEDRNSSESARHLFLRALRFHPDNKKVYK
EYFRMELLHCEKLRRQKKELELAEMDLGEYEFSPEILSGKLAEVVYSNATGKIKEAEFVI
SLLTIAAIFDFTKELQDSILQDLQTNYTEDSLTWDFMAKRELEAPGAGEELTSAKGRASD
INRREERCCQVYEEGVKSLITEPMWTCYATFCLERQKRKTNVQELKEKRQERALGVLQRA
HDSSLLKEAYYKNWLQILFLSGDAEGAASVAMAATERYSQSVSTWRLSLQTLIQLGSGDI
ARLFQDALTRVNPKESLPLWQLLVQWSTANQSPEEAEAVFKRGLVSVVAAVAMEMKESYL
NWSFSTGGYKKARKTFTSLQENRPLSKTFFTRMIEIEKEQENPKMNSLRDCYERALQEFG
TTDDDLWLQYIQVELGPGGQPENCGKIHWRAMKFLEGESVERFTSKHTLLQTGHL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggttcagcagcggatcgaggagcggatcccggagctcgagcagctggag
agagtgggactcttcacccagaaggaagtcagatccataatcaagagggtgacggccctg
gaatacaagctccacaggttgatcataaagaaagaagacttcatcgcttacattcagtat
gaaatcaacattttggagctggtgaagaagagaagaacgcacatccgataccagttcaaa
agagaagagattgagttccccatcatccacaggataaacagcatcttcagaagagcaaca
aataagtggaaggatgatgtgcagctttggttctcacatgttgctttctgcaagaaatgg
gccactaaaagccagatcagcaaagtgttctcgtccatgctcgccatccactcggacaaa
ccagctctgtggatcatggccgccaagagtgagttggaggatagaaattcttctgaaagt
gccagacacctgtttctgagggccctgcgcttccacccagacaacaagaaggtttacaag
gagtacttccgcatggagctgctgcactgtgagaaactgaggaggcagaagaaggagctg
gagctggctgagatggacctgggtgaatatgagttttctccagaaatcctgagcggtaaa
ctggctgaggtcgtgtacagtaatgctacagggaaaatcaaagaggcagagtttgtcatc
tcacttctgaccatcgcagccatctttgacttcaccaaagagcttcaggactccatcctg
caagacttacagacaaactacacagaggatagcctgacgtgggatttcatggccaaaagg
gagctggaggctcccggggcaggggaggagctgacgtctgccaaaggccgagcgtcagat
atcaaccgcagagaggagcggtgctgccaggtctacgaggagggcgtcaagagccttatc
actgagcccatgtggacgtgctacgcgaccttctgcttggaaaggcagaaacgaaagacc
aacgtccaagagctgaaggaaaagaggcaggagagggcgctgggagttctgcagcgtgcc
cacgactcctcactgctgaaggaggcttattataagaactggctgcagatcctgttctta
tctggagatgctgagggagcagccagcgtcgccatggcagctacagagcgctacagccag
tctgtgtcaacgtggcgcctgagtctgcagacgctcatacagcttgggagcggagacata
gcgaggctattccaggatgctctcactcgcgtaaatcccaaggagagtttaccactgtgg
cagctgttggtgcagtggagcacagccaaccagagtcctgaggaagcagaggccgtcttt
aagagaggtcttgtgtctgtagtggcagctgttgccatggagatgaaggagtcctacctc
aattggtccttctccactggaggctacaagaaagcgaggaagacctttacaagcttacag
gaaaaccgtcccttgtccaagacttttttcaccaggatgattgagatcgagaaggaacaa
gagaatccaaaaatgaacagcctgagggactgctacgagagggccctgcaggagttcggc
acaacagacgacgacctgtggctgcagtacatccaggtggagctgggacccggcgggcag
ccagagaactgcggcaagatccactggagagccatgaagttcctggagggcgaaagtgtg
gagagattcacttccaaacacactctcctgcagactggacacttgtaa
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