Hippoglossus stenolepis (Pacific halibut): 118122286
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Entry
118122286 CDS
T08308
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118122286
Ion channels [BR:
hsp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118122286
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
118122286
NCBI-ProteinID:
XP_035034819
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All DBs
Position
15:9891609..9898558
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AA seq
1031 aa
AA seq
DB search
MENLTPEQWREIMNKKMQFPPELIGAIQEGKIELLCGLLKTGDGIVRQLDESEDRQWREA
LNLSIRLGNEAAMVTLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTLKGHIIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAFLSVTSSDAMLSAFSLSRELRKLSQKEPEFKPQYL
GLEQLCQDFAVELLGMCRNQSEVTTILNSCGDESQDALDQQAFEEGIPNLSRLRLAVNYN
QKEFVAHPICQQVLSSIWCGNLEGWRGSRTAWKLFVSVVIFLTMPLLCLIYWIAPKSKVG
KILRIPVIRFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIMLKGHLLCHEHSGTDDCVYF
TQTVRKDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFLLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAFFYILRGIFRRMCCCCTCNSVQKYPAIATISNDKGSEETPLPYRQQVSRA
LVQRYIESARREFEETKRKDIGNRITELSKAICRMHGDIKTIQQLLTEDEHSASNLVTTK
EGSSILGKYINGARNNFRGFNSLQEDKNTSPNMTVHQEEEEVDKGKVDSHTKQETDMQQS
QVGNCGAEGSKQVTDCDVVKMEEGRVKVESGDERQTEKKKQLEAEKDENTDIKVKREGAA
GTSFNNVEGKVKGEATQDEAEKIREGEGLREATAGQAESLQVSNEKTDVKKCVNKLKDIE
LQEKKAETRWGKGKKFEHNVAEKSGVREGNDKPDAKKIIPSPTGSSSSQDTGFGSQEREG
SIDGSLVTPSP
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgcgagattatgaacaagaagatgcagttcccc
ccggagctcatcggtgccattcaggaggggaaaatcgagctgctgtgtggactgctgaag
accggcgacggcatcgtccgccagctggacgagtccgaggaccgccagtggagagaggcc
ctcaacctgtccatccgcctgggcaatgaggccgccatggtcaccctcctgcagggggtc
aagttcgacttccgtcagattcacgaggcactgctggtcgccgtggacaccaaccagccc
agagtggtgaagcgtctgctggaccggctagaccaagagaaaggcaacaagatggacgtg
cgctccttctctcaggccatctttgaccactccattgacaactcccagtttgcccccggt
gtgacccctctgaccttagcctgccagaaagacctgtatgacatagtgaccatgctcacc
ctaaaaggccacatcatcccgtggccacacaagatctcctgcgcctgtctggagtgtcgt
aacggccgtcagtacgacctgctgaagttctccttgtctcgcatcaacacctaccgtgga
atcgccagccgggccttcttgtccgtcacctcctccgacgccatgctcagcgctttcagt
ctcagcagagagctccgcaagctctcgcagaaagagcccgagttcaagcctcagtacctg
ggcctggagcagctctgtcaggatttcgcagttgagttactgggcatgtgtcgcaaccag
agcgaggtgaccacgatactcaacagctgcggagacgagagccaggatgccttggatcag
caggccttcgaggaggggatacccaacctgtcacgactgcggcttgctgttaactacaac
cagaaggagtttgtggcgcacccaatctgtcagcaggtgctctcatcgatctggtgtggg
aacctggaaggatggagaggcagcaggacggcctggaagctgtttgtctctgtggtgatc
tttctcaccatgccgctcctctgcctcatctactggatcgcaccgaagtcaaaggtagga
aagatcctgaggattcctgtgatcaggttcctcctccactcggcctcatatctgtggttt
ctcatcacattactcggagaatcgataacaatggagatgtatcgagacaaatttgcctcc
aggcagcagaacatcctgcacagctccttccacatggtgtgggtggttggattcttctgg
tacgagtgtaaggaagtgtggatcgaggggctgcggagctacttcctggactggtggaac
tgcttggacatgatggtgctcagcatgtacctggcgtccttcgctttacgtgtgctcatc
atgctcaaaggtcacctcctctgccacgaacacagcggcacagacgactgtgtttatttc
acccagactgtgcgtaaggactggcatcaggaggacccccagctgattgcggaggtgctg
tttgcagtcaccagcatgttgagcttcacacggctggcgtacatcctgccggcccacgag
tctctgggaactctacagatctccatcggaaagatgattgacgacatgatgagatttatg
ttcatactgatgatcattggaacagccttcctctgtggcatcaacaacgtctacgttcct
tatgtcatctctccacatctcggcaggtttaatgagacgttccacttcttattctggacc
atgttcggtgtggccaaccaggactacgtggacatgccacagtttttgttggcagagttt
gtcgggaggattctctacggcatcttcacgctcgtcatcgtcatcgtcctgctcaacatg
ctcattgctatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aagtttgcccggtcaaagctgtacctcagttacttcagagagggcctcaccatgccggtg
cccttcaacatcatcccctcacccaaagctttcttctacatcttgaggggtatcttcaga
agaatgtgctgctgctgcacctgtaattctgtgcaaaaatatcccgctatagccaccata
tccaatgataagggatctgaggaaacccccttaccgtaccggcagcaagtgagcagggct
ctggtgcagcgctacatcgagtcggctcgcagagagttcgaggagaccaagaggaaagac
atcggtaatcgcatcactgagctgagcaaagcgatctgcaggatgcacggtgacattaag
acgatccagcagctgctgacggaggacgaacactcggcaagcaatctagtgacgacgaag
gagggctcctccatactggggaaatacatcaatggtgccaggaacaatttcagaggtttt
aacagcttacaagaggacaaaaacacgtcacctaatatgacagtgcaccaggaagaggaa
gaggtggataaaggcaaagttgactcacacacgaaacaggagacagacatgcagcagagt
caggtgggaaattgtggcgcggagggatcgaagcaggtgaccgactgtgacgtggtgaag
atggaggaaggcagagttaaagtagagtcaggagatgagaggcaaactgagaaaaaaaag
cagttggaagcagaaaaagatgaaaacactgacattaaagtgaaaagggagggggcagca
gggaccagcttcaataatgttgaagggaaggtgaaaggcgaggccacacaggatgaggca
gagaaaataagggaaggggagggactcagagaggccaccgctggacaagctgagagcctc
caagtcagcaatgagaagacagatgtaaagaaatgtgttaacaagttgaaagacatagag
ctgcaagaaaaaaaagcagagacgagatgggggaagggcaaaaagttcgagcacaatgta
gcagagaagtctggcgtcagggagggcaacgacaaacccgatgccaagaaaatcattccc
tcgccgacgggcagcagcagctcccaggacacgggctttggttcgcaggaaagggaggga
tccatcgatgggtcgctagtgacaccgtcaccttag
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