Hippoglossus stenolepis (Pacific halibut): 118122299
Help
Entry
118122299 CDS
T08308
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118122299 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118122299 (zgc:163098)
Spliceosome [BR:
hsp03041
]
Complex A
U2 snRNP components
U2 related factors
118122299 (zgc:163098)
Complex B
118122299 (zgc:163098)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
cwf21
RRM_1
CID
CTK3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
118122299
NCBI-ProteinID:
XP_035034839
LinkDB
All DBs
Position
15:complement(10919210..10930177)
Genome browser
AA seq
882 aa
AA seq
DB search
MADKKGKTVIKTRKEQEKIKKKEEEKAAEVFEEFLASFETNQKSGVKTFVRGGIVNATKE
EEAAEVKKNKLYRPPTKFVPGSQNVSPVSSTESRKATFKRRTDEKKKSNLELFKEELKLI
QEEREERHKRKKNDPGTGGGSVGGGGGAYGDLDIPLSGRSTLYDDLTVPTTTNLYISCIS
PKMNEELLCKEFGKYGPLASVKIMWPRTDEERNRTSNRAFVAFMTRKDAERALASLDGKM
IMGFEMKLGWGKPARIPPQPLYTPVGVRATPPPPSGLPFNAQPRGRFRNDFTKPLGVSKG
ELDKTLSEAVVKVVIPTERNLLLLIHRMIEFVVREGPVFEAIIMNKEKNNAEYKFLFDNK
SQDHVYYRWKLFSILQGESPTEWRTTDFRLFRGGSLWRPPVLNNYSQEEEGTEAEEEASP
EEEVKKGQLRNEHRLRLEMLLKDLTPSREDIASTMLFSLERADAAEEVVGLIAESFALLQ
TPLQKKIARLYLVSDILHNSCAKVAGASYYRKYFETNLTQIFADLNAAHKNIQARLQAEQ
FKQKVMSCFRAWEDWAIYPEPYLIHLQNIFLGFAKAVEELPEPAEKSSFELDGAPMDSAP
IDGLPLDRAPVDDLDGCPMGWDPLDGVPADDLDGVPLGVVVDDIDGMPLDDGNAPLSIVP
LSKWEKTSDTGTFSEAKAKSKWDTVAEQDGEDEVNVSVKSQDGEEDSESDSTDEDSGSSA
KYESADFQSSLRSFQMSESKRKRLRELEVKVMKFQDELESGKRQRKSGMSIQQQVEHYRN
KLLQKEFEKDEEKTERSSSKSKDRSKEDRRDKDRSKRSEDGDRKQGRSRDPDDKTQKSRS
ISPPRNRSPKRSKRSPSPDRKAGKSRSRSPHRSHKKTKKSKH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaagggaaaaactgtgatcaaaacaaggaaagaacaagaaaagattaag
aaaaaggaggaagaaaaagcagcagaggtttttgaggaattcttggcctcgtttgagacc
aaccagaaaagcggagtaaagacttttgtccgcggtggtatcgtgaatgcaactaaagag
gaggaagcggcagaggtcaagaaaaataagctctatcgacctccgacaaagtttgtccct
gggtcccagaatgtctccccagtatcatccactgaaagcagaaaggctacatttaaaaga
aggacagatgaaaagaagaagagtaatctcgaactcttcaaagaagaacttaagctaata
caagaagaacgtgaggaaaggcataaaaggaagaaaaatgaccctggcacaggaggagga
agtgtaggaggtggaggaggagcatatggcgatctggatataccattatcaggtcgatca
acattatatgatgacctaactgtgccaaccaccactaacctctacatcagctgcattagc
ccaaagatgaatgaggagttgctgtgcaaagagtttggtaagtatggtcccctagccagt
gtgaagataatgtggccccgcactgacgaggagcgcaacaggacctccaacagagccttt
gtagcgttcatgacacggaaagatgcagagcgagccctggcttcacttgatggtaaaatg
attatggggtttgaaatgaagctggggtggggaaaaccagctcgcattccacctcagcct
ctctacacaccggtgggggtgagggccacgccgcctcccccttccggtctgccgttcaat
gcccagccgaggggtcgcttccgcaatgacttcactaagccgctgggcgtgtccaaaggg
gagcttgacaagactctgtccgaagccgtagtcaaagtggttatcccaaccgaaaggaat
ctattattacttattcacaggatgatagagtttgtggtgcgtgaaggacctgtatttgaa
gccataataatgaacaaggagaaaaacaatgcagagtacaagttcctttttgacaacaaa
agccaggatcatgtgtactaccgctggaaactgttttcaattctccagggtgaatccccg
acagagtggagaaccacagatttccgtttgtttcgaggaggctccttgtggagaccccct
gtcctaaacaactactctcaggaggaagaggggacagaagcggaggaggaagcttctcct
gaggaggaggtgaagaaagggcagctcagaaatgagcacaggctgagactggagatgttg
cttaaagacctcactccaagccgagaagatatagccagcaccatgctgttctctcttgag
cgggcagatgcagcagaggaagtagtgggactcatcgctgaatctttcgctttgcttcag
acgccccttcagaagaagattgccagattgtatctcgtgtcagacatcttgcataactca
tgtgccaaagtcgctggtgcatcgtactataggaaatattttgaaacaaacctaacccag
atatttgcagaccttaatgcagcacacaaaaatatacaagccaggctgcaggctgagcag
tttaagcaaaaggtcatgagttgttttagagcatgggaagactgggccatataccccgag
ccttatctcatccaccttcaaaacatctttctgggctttgccaaagcagtggaagagctg
ccggagccagcagagaaatcatcctttgagcttgatggtgcgcccatggacagcgcacca
atagatgggttacctctggaccgagctcctgtggacgacctggacggctgccccatgggc
tgggaccctctggatggagtccctgccgatgacttggatggcgttcctttaggagtcgtt
gttgatgacatcgatggaatgcccttggatgacggcaacgctcccctctccatagtgcct
ttgtctaagtgggagaagacaagtgataccgggactttttctgaagcaaaggccaagtct
aagtgggacaccgtggcggagcaagacggtgaagatgaagtgaatgtcagcgtcaagtca
caggacggggaggaggactcggagagtgacagcactgatgaagactccggcagttcagca
aaatatgaaagtgcagacttccagagttccctccgaagttttcagatgtctgagagcaaa
cgtaagaggttgagagagctggaggtgaaggttatgaagttccaagatgagctggaatct
ggcaagaggcagagaaagtctggaatgagcatacaacaacaagtggagcactacagaaac
aaactgctgcagaaggagtttgagaaagatgaagaaaagaccgagagatcatcgtcaaag
tccaaagacaggtcaaaagaggacagaagggacaaagacaggagcaaaagaagtgaagat
ggagacagaaaacaaggacggagtcgagatcccgatgacaagactcaaaaatcgaggagt
atctctcctccaaggaataggtctcctaaacggtccaaacgttccccgtctcctgaccga
aaggcaggaaagtccagatcgcggtcacctcaccgctcccacaagaagacgaagaagagc
aaacattga
DBGET
integrated database retrieval system
