Hippoglossus stenolepis (Pacific halibut): 118122362
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Entry
118122362 CDS
T08308
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118122362 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118122362 (msi2b)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118122362 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
118122362
NCBI-ProteinID:
XP_035034929
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Position
15:8756219..9006710
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AA seq
435 aa
AA seq
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MEGDGSQATSGSLSDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGRGARGRGGYLAYPQSTGPGLPDYGFYSTPSDQRGGP
CSFADYGSLGPQAAQMLHSEHATSACNSPLQHLHSPDQFKNPGANPSRPGGFPGANSPGP
VADLYGPGSQDSAVGNYISAASPQPGSGFGPSITVTLIQLQALRCHPGEKIDGGKPYEEE
KKNVSHLRKITTAVL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatccggaagcctaagcgactcccagcatgacccg
ggtaaaatgtttatcggtggcctcagctggcagacctcaccagacagccttagagactat
tttagtaaattcggagaaataagagaatgtatggtgatgagagaccccacgacgaaacgc
tcaagaggatttgggtttgttacgtttacagacgccgccagtgtagataaagtcttagct
caacaacaccacgaattagactcaaagacgattgatcctaaggttgcctttccccgtcgc
gcccagcctaagatggtcacaagaacaaagaaaatatttgtgggtggcttgtcagccaac
acagtagtggaagatgtgaagcagtattttgaacagtttgggaaggttgacgacgccatg
cttatgttcgataagactactaacagacatagaggatttggtttcataacttttgagagt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataacaaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggtacacgagggcgagcc
aggggtctgccctacaccatggatgccttcatgctggggatgggcatgctgagttaccct
aacattgtggcgacgtacggccgcggatacactggattcgcacccagctacagctaccag
ttccctggcttcccagcgacagcgtacggaccggtggcggcggcagcggtagcagcagcg
cgtggctcaggtaggggggcccgtggaagaggcggctacttggcgtacccacagagcaca
gggccaggcctccccgattatgggttttactctacgcccagtgaccagaggggggggccc
tgctcctttgctgactatggctccctggggccccaagcggctcagatgctgcacagtgag
catgccacctccgcctgcaactcccccctccagcacctacacagcccggatcagtttaag
aacccaggcgccaacccgtcaaggcccggaggttttcctggtgctaacagcccagggcct
gtggccgacctgtacggacctggcagccaggactcagctgtgggcaactacatcagtgct
gctagccctcagcctggctctgggtttggccccagcatcacagtgacgctaatccaactt
caagcactacgctgtcacccaggcgaaaagatcgacggtgggaaaccatacgaagaagaa
aagaaaaacgttagtcatctcagaaaaataacaactgctgtactataa
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