Hippoglossus stenolepis (Pacific halibut): 118122407
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Entry
118122407 CDS
T08308
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118122407 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsp03036
]
118122407 (nfrkb)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
118122407 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
118122407
NCBI-ProteinID:
XP_035035005
LinkDB
All DBs
Position
15:11761527..11770580
Genome browser
AA seq
1262 aa
AA seq
DB search
MNALTHMLTDAIDPKEENDGQITEECMLGDCRVNLPEDLLEDPDIFFSVMSESTWTDALT
DSQRQHLRQFLPQFPDDNVAEQDSTISDLFNNKDLNFGNPLHLAQKLFRDGYFNPEVVKY
RELCAKSQKKRQLYSRQQYYHRLLKQILVSRKELLEFAVHNGLDFPPKKKLPAKSHAEMR
EPRVRRRLSRILKEVKNECGDSNASSDDDDISSWTAAPQSPSSPTPTVSLRVFPSLSTQD
MKSTEKIELGERDLKVMLQNHREKRKRQPDHPDLMTSDIHLGDVLSRANIGRKGTNMLLF
DLSLPKKKMRDERKKKKMRTIKVESEDPFESLAPTDTASAPQGNIINSLPDTPSTPLQHI
KEEIVEECQSSPVAVEEIAVSFFSLLESILRTETLASTSMLEEKVQMWQSSPASSLNVWF
SSASCWSDLVLQALQFLAGETKDGMIALPSGFAPFVEFSDESQQWRWIGPAHDTEKDLSA
LFQLWMDSKDLVVKTESEDMLEMTSPTQRVSTDYVVRPSTGDERQVFQVQEQQRYNQPHK
AFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGE
GTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRHR
TQEEFERIHQAQAAAAKARKALQQKPKPASKPKPGSKDGGSKTPGCWEAGQDIGSNPMSP
TPTTPTPNTPGTPKSPLPCAATTPTKTVVPETIKTSPGVLLVSPPSLPQLGTILPTTKAG
PPVSQTVTSQHAARIVSHLAAGSLPQVRVVSTQAGLTSSAGSQQATLVHQTPHQIRMPLS
VTAKGISQTVVSLPLRTQSGSSPVQVPTTLSVTVAKPQTGSPGSPANNPGSPAMLASSHI
KQVSITGQLGMKTAGGAGIPITATNLRIQGKDVLRLPPSSITTDSKGQTVLRITPDMMAT
LAKSPVATVKLTPDFLGTATSKSISATLHMTPSHTSSASITGEVQTTKAGHITSTLLKAA
GDIRLMPTLAVTADQKTRTFSTVTSPDKGGATIRIMPGLGVIPQKQGQTITMTTTTGSKP
ITVSTCANVVTMAASVVASAKGITVAPGASCSSLTLGTATATVRQVPATVVTTQTGKLPT
RITVPISVLNQPLKSKSVVTSSMVKGSLSANLSSLGRNIILTTMPAGTKLIAGNKPVSFV
TAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVVTTAPSPKCAPDPPPAP
KQ
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccctcacacacatgctgacagacgctattgatccaaaagaagaaaacgatgga
cagatcacggaggaatgcatgctgggagactgcagggtcaacctcccagaggacctgctg
gaggacccggacatcttcttctctgtgatgagcgaaagcacctggactgacgcactgaca
gattcccagaggcagcaccttcgtcagtttttaccacagttccctgacgacaacgttgcg
gagcaagacagcaccatcagtgacctattcaacaacaaagatttaaactttggaaatccc
cttcatcttgcacaaaaactattcagagatggttacttcaatcccgaggtggtcaagtac
agggagttgtgtgccaagtcgcagaagaagcgacagttgtattcccgccagcagtattac
cacagactgctgaagcaaatcctcgtctccagaaaggagctgctggagtttgcagttcat
aatggtttggactttccaccaaaaaaaaagttgccggccaagagtcatgctgaaatgcgg
gagccaagggtgagaagaagattgagccgcatactgaaggaggtcaaaaatgagtgtgga
gacagcaatgcttcatctgatgatgacgacatatcgtcatggactgcagcaccacaatca
ccttcctctccaactccaactgtttcactcagagtctttcccagcctctctacccaagac
atgaagagtactgagaaaatagaactgggtgagcgagacttgaaagtcatgctgcaaaat
catcgagagaagaggaagcgacagcctgaccatccggacttgatgacctctgatatccat
cttggagatgtactttcaagagcaaatattggtcggaaggggactaatatgttactcttt
gatctgtctctacctaagaagaaaatgagagatgaaaggaaaaaaaagaaaatgaggaca
ataaaagttgaatctgaggatccctttgaaagtcttgcacctacagacacagcgtcagcc
ccacaagggaacatcatcaactccctgcccgacacgccgtctactccactgcagcacatc
aaggaggaaattgtggaggagtgtcagagcagcccggttgcagttgaggaaatagctgtc
agctttttcagcttgttggagagcatcttaaggacagagactcttgccagcacttcaatg
ttggaggagaaagttcagatgtggcagtcctctccagcaagttccctcaacgtgtggttt
tcatctgcttcctgttggtctgacttggttcttcaagctctgcagtttcttgcaggggag
actaaagatggcatgatcgcgctccccagtggctttgctccatttgtggagttttccgat
gaatctcagcagtggaggtggattggccctgctcatgacacagagaaggatctcagtgca
ctcttccagttgtggatggactctaaagatttagttgtcaagacagaaagtgaagacatg
ttagagatgacttctcccacacaaagagtttcgactgattatgtggtgcggcccagcacc
ggagatgaaagacaagtgtttcaagtccaggagcagcagcgatacaaccagccacacaaa
gccttcaccttcaggatgcatggctttgaatctgtggtggggcctgttaaaggagtgttc
gataaagagatgtctctcaacaaagccagggagcacacgctgctccgctcggaccgaccg
ccatacgtcaccattctctctctggtgcgggatgcggcagccaggttacccaatggagaa
ggaacaagggcagagatctgtgaactgttgaaagactcgcagtttcttgctccagatgtc
actagtgctcaggtgaacacagttgtcagtggagccctggatagacttcattatgaaaaa
gatccttgtgtaaaatatgacattggccgcaaactgtggatttacctgcaccgtcatcgc
actcaagaggagtttgagcgaatccaccaggctcaagctgcagctgcaaaagcaagaaaa
gctcttcagcagaagcctaaacctgcatccaagcctaagcctggaagtaaagacggcggc
agtaaaacccctggatgttgggaagcgggacaggatattggctccaatcccatgtcacca
actccaacaacacccaccccaaacacacctggaaccccgaagtcacccttaccctgcgcg
gcaaccacgccgacaaaaactgtagtcccagagacaataaaaaccagtccaggtgttctc
ctagtgtcccctccttcgttgcctcagctgggaaccatcttacccaccacgaaggctggc
ccaccagtgtcacagacggtcacgtctcaacacgctgctcggatagtgagtcatctggcg
gcgggctcccttcctcaggtgcgggtagtttctactcaggctggtttgacctcatcggca
ggaagtcagcaggccacactggtccatcagaccccacatcagatcaggatgccgctctca
gtgacagccaagggcatttcacagactgtggtgtctttgcctctgaggactcagtctggg
agtagtccagtccaggtgccaaccaccctgtctgtaactgtagctaaacctcaaactgga
tcacctggaagcccggctaacaaccctggttcccctgctatgctcgccagctcccacatt
aaacaggtgtctatcacaggacagctgggaatgaagaccgcaggaggagcaggaattcca
ataactgctacaaacttgcgcattcagggtaaagatgtgctacgtcttccgccatcctcc
atcactacagactctaaaggccagacggtgctgcggataaccccagacatgatggcgact
cttgccaaatctccagttgcaaccgtcaaactcacccctgacttcctgggcaccgccacc
agcaagagcatatcagccactctgcacatgacgccgtcccacacttcctctgcctccatt
acaggggaagtacagaccactaaagcgggccacatcacctccaccttgttgaaggcggca
ggagacatacgtctgatgccgacactggctgtcacggctgaccaaaaaacgaggaccttc
tccaccgtgacgtcacctgacaagggtggcgccaccattcggataatgccggggcttggt
gttatccctcagaaacagggtcagaccatcacaatgaccaccactactggcagtaaacca
atcactgtgtccacttgtgcaaatgtggtgaccatggctgccagcgttgtagctagtgcc
aaggggatcacagtggctcctggagcctcttgttcatctctgacgttgggaacagctacg
gccactgtgcggcaggtccctgctacagtggttactacacaaaccgggaagttacctaca
cgaatcactgtgccgatctctgtcctcaaccaaccactgaagagcaagagcgtagtgacc
tcatcgatggttaaaggaagcctgagtgcaaacctcagcagcctgggcaggaacatcatc
ctcaccacgatgcctgctggcacaaagctgattgcaggaaacaaaccagtcagctttgtc
acagcacaacagttccaacagcttcagcagcaaggacaggccacacaggttcgcatccag
acggttcaggcacagcagctccagcagcacatggccacgggctctccgaaatcagtttcc
acggtcgtggtcacaacagcaccgtcacccaaatgtgcacctgatcccccacctgctcct
aaacagtga
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