Hippoglossus stenolepis (Pacific halibut): 118122471
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Entry
118122471 CDS
T08308
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsp03037
]
118122471
Cilium and associated proteins [BR:
hsp03037
]
Motile cilia and associated proteins
Sperm associated proteins
118122471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
118122471
NCBI-ProteinID:
XP_047199277
LinkDB
All DBs
Position
15:complement(12295549..12315783)
Genome browser
AA seq
2526 aa
AA seq
DB search
MDNPASYYGKLDKKNPVISAFERDINSFMTLMKRVASSSSKDNSSYVRGIKFLVDIWGKF
KHRLPSKMYEERMFQVADFLFGIKLYQLALWQGYSHHLQQFNSVTITDITSVDHFMACFF
PEGFDTDQDVFTMKILAMQGCALCLFELEKRHGVLRQDGLSRLLRVLNFIRIMMQALQQH
EHLCWHIYNGSIHIYTICRYLMTMNYSSQALEYLLWASISLELSVPLMTAQYLSWIVTLY
SAVCHCYYDNQAAVQAEKFARRALGKINELAEFEGQSEVPATRETQRAYKEASIKLGAMM
FKRAVYESKRKPKFGVKVKPKSSLKDIPNGPWPRDPTERMLMAQFDSGAAQFLGILEALW
DSTTHLLQKRMPEEPELQEVIVELLSAGISILSGVATTKEQKSDSQPRGCLSALTPTSTL
MDLAITGENKVPVMSAVRFIKLLFLYKQPDAFTELSREMLQVLSGVEGVSFRKAEIELAL
LDGFNSLMSSQRSRPKDSNMIDDRHKASLSMSDEFVCLVDILHKSACGSALEVQPDEDLV
LDVMLFLWGRVKVVMQRDIIENPDLARYLKKVDKDNKWLWSLSRLCEVAFVHDLATVDCI
TMTEMIHTLVILLESAAERSNKTQRPEAPEAVCGGVMACSFSLPETSSTELLQKVCEMAR
RGLTALAKGIATLLPPDSSAITDSVFMQKCCPLPPLSSHLSSATSSEKGNEDDEISENEK
EQMETKTESDIKDSRDNRSTSVLLLAKDLHQKLDIIYHRASLKLLQLNAVAESELMDRIK
KNKVSKALLLIQKALLLYNSMEIDKSRKTKNLLEEASSLIEKAEVEERGLYISTIAKTPA
EDLDKGINEEEENPPPPPILLSRTDHALTFAPAPYNLEGQVCWYELCGLAADGINRKVRL
RDCFLPGTGTLVPAVSGECVLRVEGLVPNQKYIFAVAAYNSQGKLLGNSIGRTTFPLLAS
MPVPLLSTWAHLAQVAFQTEQYTIAKRACRELWSHFTLPDPGSHSSHDSLDTTRLCEQTL
ELASPHLRKLFLISIFIETEINIQQGSLYYGCNNGPFIWEQEVRLAECERVLVAMDLAMY
LKDGLAAVQAVVSCYGLLAPLTFHQIPCKPVVQVLKKCLTVLENSDRLKQKWTVNISQAL
MHMIACITYYLSKACRALREPPMAGSVMDCGRRLLKEVYDVQLQIRRATNEACGDRATIK
RETKTSLQLKALHVKNKKRIPSQAATSTDNEISSSLTSSEDPTILYEVIFYDPLKDAYEN
VMRVRRKAYFPEYAALLLQRTLTEGCPDLVLKWGQSIFEYLSRRDKVILEGLEGNGLNKR
GESVQDPKGNEPSQNKNTTKDDTRNKLKQKKLHSMFQRVKTNRELQAVENLLTTMSSVVQ
RRKKQLKLRNLYCEERVWKSHINYSMAKAHMALFYQGLDQLHGSTLQQRFSQLNPLYFSL
AYAGVLVRRNSQQQPSTEYGIGSERDSSHSVVRVHGAARTDKDEAVRVDKIAKEEKCEKE
ENSSKTAEQQIEMKRRTASMMLGSISKAALHLKRAMVLAHRGSHWTTLQHVCHTVWDQSC
RIASLAQTAWHLEPDSPLTAAQLHTTISQLLSLATDLIMDMLNSLGLWSLYDSDLTEEEL
ESSLHFSASLDDSTHVDLRWVRTLVLHTLERLHDCGKWESLAHFALLFNSYTRERYVSIT
TPLLVHAQRRLLERISCFGGPAAPQPHHARTQKVTGEEVTYRSYAGCQLLCGWTPHHAQQ
PPTHINSEPANASPQEAVELKDAEMQSSMSLVCVPLDIEDTLSCYHQAFERRPDCLRVFQ
HSRSLLMLLLANTQPCFAAQLQGHSENQVDFNPNVMPTPSIQPCELTEEDYSNPDALYGL
PISADHLPTVTAAYSSSIKYLQANSQDSLRIQALHEMGNLHFYNGNIRAAHLSWTKAVDC
ALQSSGAVEKWDGLSFGGCSLQETLKQAGIWGCLQAAALTAKIAQHILTSDIRQRTKYCL
LSAHLFKCVLCCSLTQPQDDLLYASYSIGDELLPGVDLFSEPHRVHLATTVTSLNFICHW
LFTTGYWITLLPMLAIYLHFVGTVCRDVQRFVEGKILKIHALTELCLYTDAVKEAVQLTQ
GIGILLPDGRHIAKDDHQPMKTFYSNKSVMDNAEALEELMNCDFAPVVRKLYGSTLCLRF
NLARVQLVLALTNTVPGPSVSDTAVSEACASGTSISINSKSSEQKTPDAESHCPKTEETK
VLDLDTEKMLTPGSLKFLLLEGVSSLLQSISQQLTSQCCSETENLELAIETNLLKANHYL
QQGHVELSSQMAVSSLALLQTSPGRSIFDSKTSEPELPHPRTGSEQGTKDCCVSNTLHGD
CPRTIEASERIGVSLWLRCRLALVCSLTAQSCGTAALFSGKNMNEEAARLLQEGLNECAR
WGDTENQALLMVEAAELEAQRGNTDDSMALLQEVVSLLSGRPCIPPRSSVTLARATLLFC
DLKSAESTTLLNVAQKLLQNQLCVFGENVVLEDGNLCFPPPGPCNIYLPYHSILDQITLQ
ITKCIT
NT seq
7581 nt
NT seq
+upstream
nt +downstream
nt
atggataatccggcttcatattatgggaaacttgataaaaaaaatccagtgatctcagcg
tttgaacgggacattaactcgtttatgactctgatgaaacgagttgcctcttcaagcagc
aaagacaacagctcgtatgttagagggattaaattcttagtggatatatggggaaagttc
aaacatcgactgccttcgaagatgtatgaggagcgtatgtttcaggttgcagactttctc
tttggaataaagttataccagttagctctttggcagggctacagtcaccacctgcaacag
ttcaactcagtgacaataactgacattacaagtgtggaccacttcatggcctgcttcttc
cctgaaggttttgatacagaccaagatgtcttcaccatgaagattcttgcaatgcagggt
tgtgccctgtgtttatttgagctggagaaaagacacggcgttctcaggcaggatggactc
agtagactactgcgtgtgctgaacttcatccggatcatgatgcaggctcttcagcaacat
gagcacctctgctggcatatatataatggttcaatacacatttacaccatctgtcgttat
ctgatgaccatgaactatagttcacaggctctggagtatcttctgtgggcaagcatcagt
ttagagctgtccgtccctctgatgactgctcagtatctgtcatggattgtcacactctac
agtgctgtgtgccactgttactatgacaaccaggctgcagtgcaggcagagaaatttgca
aggagagccctcggaaaaatcaatgagctagcagagttcgaggggcagagtgaagttcct
gccaccagagagactcagagagcttataaagaagcctcaatcaagctgggtgccatgatg
ttcaagcgggcagtgtatgagtccaaaaggaaacccaaatttggggtcaaagtcaaacct
aaaagcagcctcaaagacattcctaatgggccatggccccgagatccaacagagcgcatg
ctaatggcccagtttgacagcggcgcagcacagtttttgggcatcttagaagcactttgg
gacagcaccactcacctgctgcaaaaaaggatgccagaagaaccagagctgcaggaagtg
attgtggaacttctctctgctggcatcagtatcttatctggagtcgcaacaactaaagag
caaaagagtgatagccaaccacgtggctgcctcagtgcactgacaccaacatccactcta
atggatttagccattacaggagaaaataaagtacccgtcatgtctgcggtgaggtttatc
aagctgttatttctgtacaagcagccagacgcattcactgaactttccagagagatgctg
caggttttgtctggtgtggaaggtgtgtccttcaggaaagcagagattgagcttgcttta
cttgacggtttcaacagtctgatgtcttcccagaggagccgtcccaaagacagcaacatg
attgatgacagacacaaggcttcattgtcaatgagtgatgagtttgtttgcctggtagac
atcctgcacaagtcggcttgtggctctgctctggaggtgcagccagatgaggaccttgtt
ttggatgtcatgttatttctctggggtagagtgaaggtggtgatgcagagggatatcatt
gaaaacccagatttagcacgctaccttaagaaggtagataaggacaacaagtggctgtgg
tctctgtctagactgtgtgaggtggcttttgtccatgacctggcaactgtggactgcata
acgatgaccgagatgatccacactttggtcatattgctggagagtgcagctgaacgcagt
aataaaacacaacgtccagaagctcctgaagcagtctgcggtggtgtgatggcgtgctcc
ttctctctgcctgagacttcgagtacagagttgctccagaaggtgtgtgagatggcgagg
agaggtcttacagctctagcaaagggtatagctacactgctgcccccagactcctcagct
atcacagactctgtcttcatgcagaaatgttgtcccctccctccattgtcttcccaccta
tcttctgcgacatcgtcagaaaagggaaacgaggatgatgaaattagcgagaacgaaaaa
gagcagatggaaactaagacagaatcagatattaaagactctcgagacaataggtccacg
agtgtgctactgctggccaaagaccttcatcaaaagctagacatcatctaccacagagct
tccctcaagttactgcagcttaatgcagttgcagagtctgaactgatggatcggatcaaa
aagaacaaggtgtccaaagctcttctcctgatccagaaagccttgctactgtacaacagc
atggaaatagataagagcagaaaaacaaagaatcttctagaggaggcctcctccttgata
gagaaggcagaagtagaggagagaggactttatatctccaccatcgctaagactccagct
gaagatttagacaaaggaataaatgaagaagaggaaaaccctcctcctccccccatcctt
ctctcacgcaccgaccatgccttaacctttgccccagcaccttataacttggagggacaa
gtgtgctggtacgagctctgcggacttgcagctgatggcattaacaggaaagtccgcctc
agagactgcttcctgccaggaactggaactttggtaccagcagtatctggtgagtgcgtg
ctgagagtggaggggctggtgcccaaccagaaatatatatttgctgttgcagcctacaac
agccagggcaagctactgggcaacagcattgggcggacaacattcccactgctggcatct
atgcctgttccactgctttctacatgggctcacctggctcaggtggcatttcaaacagag
cagtataccatagccaagagagcctgcagggaactgtggagccacttcaccttacctgac
cctgggtcccacagttcacatgatagcctggacaccacaaggctgtgtgaacagaccctt
gagctcgcctcgccccacctgcgtaagttgttcctgatttccatcttcattgagacagag
atcaacattcagcagggatcgctctactatggctgtaacaatggaccgttcatctgggaa
caggaggtcagactggcagagtgtgagcgagtgctggtggcgatggacttggcaatgtat
ctgaaagacggacttgctgccgtgcaagctgtagtaagctgctacggccttttggcacct
ctaaccttccatcagattccttgcaaacctgtcgtacaagtgctgaaaaaatgcttgaca
gttttggagaattcagatcgtctcaagcagaaatggactgtaaacatctcacaggcacta
atgcacatgatcgcctgcattacctactatctttcaaaggcgtgtcgtgctctcagggag
cctccgatggccggttccgtgatggactgtggtcgcaggctgctcaaggaggtttatgat
gtccagctgcagatcaggagagccaccaatgaagcttgtggagatcgtgctacaatcaag
cgtgaaacaaagacaagccttcagttaaaggcactgcatgtgaagaacaagaaaagaatc
ccatctcaagcagctaccagcacagacaatgagatttcaagctcactgacaagctctgag
gatcccaccatattgtacgaggtgatcttctatgacccattaaaagatgcctatgagaat
gtgatgagggtcagacgcaaggcgtacttccctgagtatgcggcgttactgctccagaga
accctgacagaaggctgcccagaccttgtattaaagtgggggcagagcatatttgaatac
ctttccaggcgtgacaaagtgattttggaaggtttggaaggaaatggtctcaataaaaga
ggagaaagtgttcaggatccaaaaggaaatgaaccatcccagaacaagaacacaactaaa
gatgacacaagaaataaattaaagcagaaaaagctacacagcatgtttcaaagagtgaaa
actaacagggagttacaggctgtggagaacctgctaacaacaatgtcatctgtggtacaa
cgccgcaagaagcagcttaagctgaggaacctgtactgtgaggagagagtgtggaagtca
catattaactacagcatggcaaaggcacatatggctctgttttatcagggcctggatcag
ctgcatggaagcaccctgcaacaaaggttcagtcagttaaatcccctgtatttctctctg
gcctacgctggtgtcctggtgcggaggaactcacagcaacaaccgtctactgaatatggg
atcggctcagagagagactcatcgcattctgttgtgcgggtccatggggctgctcgcacg
gacaaagatgaggctgttagagttgataaaattgccaaagaggagaagtgtgagaaggaa
gagaactcctctaaaactgcagaacagcagattgagatgaaaagacgcaccgcttccatg
atgctgggctcaattagcaaagctgctttacatctcaaaagggccatggtgttggcgcat
cgtggcagccactggaccactctgcagcatgtgtgtcacactgtgtgggaccaaagttgc
agaatagcttccctagctcagacagcttggcaccttgaacctgactcccctttaacagca
gcacagctgcacaccaccatcagccagctactgtcactggctactgacttaatcatggac
atgctgaacagccttgggctgtggagtttgtatgacagtgacttgactgaggaggaactc
gagtccagccttcacttctcagcctcattggatgacagcacccatgtggacctgcgttgg
gtccgcaccttggtgttgcacactctggagcggctccatgattgtggcaaatgggaaagc
ctggcccattttgctttacttttcaactcatacacaagggaacgttatgtgtcgatcaca
actcctttgctcgttcatgctcagaggaggctgcttgaaaggatcagttgttttggagga
cctgcagctccacaaccacatcatgccaggacacagaaggtcactggagaggaggtgact
tacaggagctatgcaggctgccagcttctctgtgggtggacccctcaccatgcacagcaa
ccgcccactcacataaattcagaacccgcaaacgcatctcctcaagaggcagttgagctt
aaagatgcagaaatgcagagctccatgtccctggtgtgtgttccactggatatagaagac
acattgagctgttaccatcaggcttttgagagaagaccagattgtcttcgcgtctttcag
cacagccgctccttactgatgctgcttctggcaaacacacaaccctgctttgcagcacag
ctgcagggtcattctgaaaaccaggtggatttcaatcccaatgtcatgcccactccaagc
atccaaccctgtgaactgacagaggaggactacagtaatccagatgctctctacggcctc
cctatcagcgctgaccacttgccaactgtcactgctgcatactcctcttccattaagtat
ctccaggccaacagtcaagactccctcagaattcaggcgctgcatgaaatgggaaaccta
catttctacaacggaaacatacgggcagcacacttgtcctggactaaagctgtagattgt
gccttacagagctcaggggcagtagagaaatgggatggtttgtcgtttgggggttgctcc
ctgcaagaaaccctgaaacaggctggcatctggggatgtctacaggctgctgcgctcact
gctaagattgcacagcatatcttgacttctgatatccgccagcgaaccaaatactgtctt
ctttcagctcacctcttcaagtgtgtgctgtgctgctccctgacacaaccccaagatgac
ctcctgtacgcctcctacagcatcggagatgaactgctccctggagttgaccttttctct
gaacctcaccgagttcaccttgctaccactgtaaccagccttaactttatctgccactgg
cttttcaccacaggctactggatcacgctattgcccatgcttgcaatttacctacatttt
gtggggaccgtttgcagagatgtccaacgttttgttgagggcaaaatactgaagatacat
gccctgactgaactgtgtctttacactgacgctgtaaaggaggcagtacagcttacacaa
ggaataggcatccttctgcctgatggacgccacattgccaaagatgatcaccaacctatg
aagacattctacagcaacaagtctgtaatggacaatgctgaggctttggaagaactaatg
aactgcgactttgcaccagtggtccgaaaattgtatggatccacattatgcctgcgattc
aacctggctcgagttcaactagtcctggcactcactaacaccgtacctggcccctctgtc
tcagatactgctgtaagcgaagcttgtgccagtggaacaagtatttcaataaactcaaaa
agcagtgaacagaagacacctgatgctgagagccactgtccgaagacagaagagactaaa
gtgctggatctcgatacagagaagatgctcactccaggaagccttaagttccttttgtta
gaaggagtatcctccttgttgcagtccatatcacagcagctcacatcacagtgctgtagt
gaaacagagaacctggaactggcaatagagactaatcttctgaaagccaaccactacctg
cagcaaggacatgttgaactaagttctcagatggcagtctcatccttggcattgctgcaa
acgtctcctggaagatccatatttgactctaaaacttcagagcctgagctcccacatccc
aggactggaagtgaacagggtactaaagattgctgtgtgtcaaataccctgcatggagac
tgtccaagaacaatagaggctagtgagagaataggagtttctctgtggctgcgttgccgc
ctggctctggtctgcagcctcactgcacaaagctgtggcactgcggcccttttttcaggt
aagaacatgaatgaggaagcagctcggttgttacaggagggtcttaatgaatgtgctcga
tggggagacactgaaaatcaagcccttttgatggtcgaagctgcagagttggaagcacag
agaggcaacactgatgacagcatggcactacttcaggaagtggtgagtctgctgtcagga
cgaccatgcataccaccaaggtctagtgtgactctggctcgggccactttgcttttctgt
gacctgaaaagtgcagagagcaccacacttctaaatgtggcacagaaactactgcagaac
cagctgtgtgtttttggtgagaatgtcgtgttggaagatggaaatttgtgtttccctcct
cccggaccctgcaacatctacctcccgtaccatagcatcttggatcagatcactttgcaa
atcactaaatgtataacttga
DBGET
integrated database retrieval system
