Hippoglossus stenolepis (Pacific halibut): 118122501
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Entry
118122501 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118122501
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Motif
Pfam:
V-set
Ig_3
ig
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
118122501
NCBI-ProteinID:
XP_047200155
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Position
17:complement(3579791..3654042)
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AA seq
400 aa
AA seq
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MTDFSTIYKLCLLTVTCCIQACSSSSSRCPAVECWLVQDHVGRGGATRSVCXLLYIRTDA
NSRDAASEQIPSDINPDRVFFITDPAATLCHQSLGPPTRGSLQKAQCEISPFLHQPSTLK
WVAPLTVTGFSPVYLQADWFSAALLGLNKQLVISSIMRSPTATKGPNVILSVSSKTVSVQ
ARLGKPVLLDCGFWVDPSSPLSGSGFAVEWRYQFRGKGRLVLAYDGKTDRVADTQEEGAT
LDFEGLHQKGNASLILQETKVRHSGTYICTVHLPYLQAQVAVELEIVEPPSLSIHPSPLP
LAVPGQTLVVQCEASGFAPLSLELSWEFKGADGKSRPLESASVTGHRQAWDGTYGQSAQL
ELDTSNLGTGGGAHLCGRPPWRHTTGQHVPQCHRIRFSVY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttttctaccatttataaactctgcctgctcactgtcacctgctgcatccaa
gcctgcagcagcagcagcagcaggtgtccggcggtggagtgctggttagtacaggaccat
gtgggtcgaggaggagcgacgaggagcgtctgtnncctgctttatatcaggacagacgca
aacagccgagatgcagcgtcagaacagattccctccgacatcaacccggacagagtcttc
tttatcacagacccggctgccacgctctgccaccagtccctcggcccccccaccagaggc
tcgctgcagaaggcccagtgtgagatcagccccttcctgcatcagccctccacactcaaa
tgggttgctccactcacagtcactggcttcagccccgtgtacctgcaagctgattggttc
tcggctgcgctactggggctcaacaaacagctggtcatttccagcatcatgcggtctccc
acggcaaccaaagggccaaatgtgatcctgagtgtcagcagtaaaaccgtctcagtgcag
gcccggctcgggaagccagtgctgctggactgtggtttctgggtcgatccttcctcgcct
ctgtccgggtcgggtttcgccgtcgagtggcgttaccagttcagaggcaaaggacgactg
gttctggcttacgacggcaagacagaccgtgtggctgacacccaggaggaaggggccaca
ctggactttgagggtttgcaccagaaaggaaatgcatccctgatcctgcaggagacgaaa
gtgcgtcactccgggacgtatatttgcaccgtgcatctgccgtaccttcaggctcaggtg
gcggtggagcttgagattgtagaacctccatccctctccatccacccctcccctctgccc
ctcgctgttcccggacagactttggttgtccagtgtgaagcgtccggcttcgccccgctc
tccctggagctgagctgggagtttaaaggcgcagatgggaagtccagacctctggaatca
gccagcgtaacgggccacaggcaggcgtgggatggcacctacggccagagtgcccagctg
gagctcgacacctctaacctgggcacgggggggggggctcacctgtgtggccgtccaccc
tggaggcacacgacgggccagcacgtccctcagtgtcatcggattcggttctctgtctat
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