Hippoglossus stenolepis (Pacific halibut): 118122567
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Entry
118122567 CDS
T08308
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118122567 (ddx52)
Enzymes [BR:
hsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118122567 (ddx52)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
90S particles
Helicases
118122567 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
118122567
NCBI-ProteinID:
XP_035035244
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All DBs
Position
15:complement(12484752..12491456)
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AA seq
662 aa
AA seq
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MDAFDLFRKLGAGAKFDLKRFGQDANRFKVVRAQGGEASLDPLSAIDYFGTGLANGAQSS
PTELEEHGEEDEKESDSGDSCAGVKRQREEEERSLRTKKKKKKTKINQVEAGGTEGGGIT
WTSAQERKILNLPTDKKEKNSMKRLKHLHQQKVNHIRSQHRINVHGCDVPDPVSTFDELQ
SEYRLNTRVIQNLKDAGLNSPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLAHL
QQPANLGFRAVVISPTRELASQTYRELVRLSEGVGFRVHIIDKASLAAKKYGPQSNKKYD
ILVSTPNRLVFLLNQDPPALDLSSVEWLVVDESDKLFEGGKTGFREQLATVFLACSGSKV
RRAFFSATCTPDVEQWCRLNLDNLVSVNIGHRNTAVETVDQQLLFVGTESGKLVAMRDII
KKGFLPPMLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLI
CTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRTGRAGHQGKAMTFFTEDDKPLLRSI
ANVIKQAGCPVPDYMIGFKKIHSKDKRRLEKKPPKRSTICTTPRFLMKKTGKAQGQKQQK
QAVDGEQKGEKKTKGLKLKKRNETQKEKGTEKQSKPSQKMGSNSPAAKFKKKGGKKTKPQ
KE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcgatttgtttcggaagctcggagctggagctaagtttgacctgaagagg
tttggtcaagacgcgaaccggttcaaggttgtcagggctcagggaggagaagcttcctta
gatcccctctctgccatcgattacttcggcacaggcctggccaatggagcccagagcagc
cccacagagctggaggagcatggagaagaggatgaaaaagaaagtgacagtggagattct
tgtgcaggagtcaaaagacagagagaggaagaagagaggagcctgaggacgaagaagaag
aagaaaaagacgaaaataaaccaggtggaagctgggggcacagagggaggtggcatcacc
tggacgtccgcacaggaaagaaagatcctgaatttgccgactgacaagaaggagaaaaac
tctatgaagaggctgaaacatcttcatcagcaaaaggtgaaccatattcgctcccaacac
cgtataaacgttcacggctgcgatgtgcccgacccagtgtccacatttgacgagctgcag
tccgagtatcgtctcaacacacgtgtcattcagaacctcaaagacgcggggttgaattcc
ccaacgccaatacagatgcaggcgataccgctcatgatgcatggtcgggagctcctggcc
tgcgctcccactggatcagggaagactttggctttctgtctcccgctgctcgcacacctg
cagcagccggccaacctgggcttcagagcggtggttatctccccaacaagagagctggcc
agccagacctacagagagctggtccgtctgtcagagggagtcggatttcgagttcacatt
attgacaaagcttctctggcagcaaagaaatatggaccacagtcaaacaaaaaatatgac
atactcgtcagtactccgaacagactcgtcttccttctcaatcaggatcctccagctctc
gacctcagcagtgtggagtggctggtggtggacgagtcagacaagctgtttgaaggtggt
aagaccggcttcagggagcagctggctacagtgtttctggcctgctcggggtcaaaggtg
cgcagggctttcttcagcgccacctgcacaccggatgttgagcagtggtgtcgtctgaac
ctcgacaacctggtgtcggtcaacattggacacagaaatacagcagtggagacggtggac
cagcagctgctgtttgtcggcacagagagcggcaaactggtcgccatgagggacatcatt
aaaaaaggttttcttcctcccatgctggtgtttgttcagtctattgatcgagcacgggag
cttttccatgagctggtgtatgaaggcatcaatgtagatgtgatccacgcagaccgcaca
cagcagcagagggacaatgtggtgagcagtttccgctccggtaagatttgggtgttgatc
tgcacggcgctgctcgccagaggaatcgacttcaaaggggtcaacctcgtgctgaactac
gacttccccaccagtgctgtggaatacatccaccggattggtcgaaccggccgagctgga
catcaggggaaggccatgaccttcttcacagaagatgacaaaccactgctccgaagcatc
gctaatgtcattaaacaagctggctgtcctgtccccgattacatgatcggctttaagaag
atacacagcaaagataagcgcagacttgagaagaagcctcccaagagaagcacaatttgc
acaacccctcgtttcttaatgaagaaaacgggcaaagcacaaggacagaaacaacagaag
caagcagtggatggagagcagaaaggagaaaagaagaccaaaggactgaaactgaagaaa
agaaatgaaactcaaaaagaaaagggaacagaaaaacaaagcaagccgtcacagaagatg
ggatcaaattcccctgcggctaagtttaagaagaaaggagggaagaagactaagccacaa
aaggaatag
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