Hippoglossus stenolepis (Pacific halibut): 118122578
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Entry
118122578 CDS
T08308
Symbol
nbeaa
Name
(RefSeq) neurobeachin a isoform X1
KO
K24183
neurobeachin
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118122578 (nbeaa)
Membrane trafficking [BR:
hsp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
118122578 (nbeaa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Beta-prop_IFT122_1st
Laminin_G_3
WD40
Beta-prop_WDR5
Neurobeachin
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
DUF4800
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
118122578
NCBI-ProteinID:
XP_035035267
LinkDB
All DBs
Position
15:complement(17897176..17989641)
Genome browser
AA seq
3040 aa
AA seq
DB search
MSSEKPASAPPGSASSLTDTDRDPHPPPGSSAPQPQQQVAAAGASSGAVTGERMVSAAGS
MVLPAGVINPAVPIRNIQMKFAVLVGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQ
EAESIGCMVELLSHCEVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIQQVLLKMSTVDDM
IADLLVDMLGVMASYSITVKELKLLFSMLRGDNGIWPRHAIKLLSVLNQMPQRHGPDTFF
NFPGRSAAAIALPPIAKWPYQNGFTINTWFRQDPLNNINVDKDKPYLYCFRTSKGIGYSA
HFVGNCLIVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSY
GDMAWHVNTNDSYDKCFLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGPGYK
STFKFKSESDIHLAEHHKQVLYDGKLASSISFTYNAKATDAQLCLESSPRENASIFVHSP
HALMLQDVKAIVTHSIHSAIHSIGGIQVLFPLFAQLDYKQLNDCSVDTSVCATLLAFLVE
LLKSSVAMQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLPHGAPLLKQ
LCDHVLFNAAIWIHTPAKVQLSLYTYLSSEFIGTATIYTTIRRVGTVLQLMHTLKYYYWA
INPLECSGISPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTM
HEDENIHDVLQLLVALMSEHPASMIPAFDQRNGIRVICKLLASKSESIRVQALKVLGYFL
KHLGHKRKVEIMHTHSLFTLLGERLMMHTNTVSITTYNTLYEILTEQVCTQVVHKPHPEP
DSTVKIQNPMILKVVATLLKNSSPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQ
DWMFSLGYINPKSPEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEA
HKEYLAKMYEEYQRQEEENMKKGKKGSVSTISGLSAAPAPVVNGNLEIDDNSQTQTPESE
AEYSEGANLLAEGAVKRPNGEALTPGEQSAGPGVRVEVHDLLVDIKAEKVEATEVKLDDL
DLSPEGLSGGVVVGGGGGMENGPLVEVDSLLDSAYCAVVQNMNGNLAPKDDTPASGVGLG
PSLGLSGVNLEDDGNMGPLITLADEKDSVPSNNGFLFSKVDEKLLPALAATDPLVLPSPD
QPTSSGPVPSLSTTSASDDLSLLAHMTSCGSDLQTGSHTAGELPEDGLFKIQSPLADISS
IAEAESQSQIQGASRPDFPEGEVTAGAEGEAAGVKTGGDTASTTSDTERSDDGKDKDTKK
IQTTATTQALHGRTAAQLERDLRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPM
HQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGG
ILPLLSAATSPSSSKNSANAKAGGARPQGGSKGEEVTPVPGGGGTGGETELENIEATQGM
SSETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLEC
RQRQRDRSCKSSLTSSKSQDSLHSASNTNKQDPDRLLQDVDINRLRAVVFRDVDDSKQAQ
FLALAVVYFISVLMVSKYRDILEPQREICRSTSLSGRSIRHEINSPTSTEHPSTAFSDKQ
TPTPVDDSPRAGLPHTDSGIGEEGHVAGSLNGSEMGLGLGLGLVGRETDRDRDRDMGGGG
GGGPDLLCSLSDVRRSQESLLDSPHNPGSNPNSSNAPPSSISSITQTNKGINVKEILKSL
VAAPVDGGDLGQDSGPTPYHPDPALKTHPMLPMQFHSFDRSVVVPVKKPPPGSLSVNTVG
TPTTGGSTTAGSTPNIFAAATATPKSMINTTGATDSASSSSSSSSSFVNGATSKNLPAVQ
TVAPMPEDSMENMSAYCEVAQCALRSGQTPPELKSFSSLAGFQTAPRDAGQCFSITTKLE
RALEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTGLVCMKSSTSVVELVMLLCSQE
WQNSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESNC
AQYAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGTMSQSQLHDFWR
LDYWEDDLRRRRRFVRNAFGSTHADMSLKALEDYGTEEEEEGMKSKKNLRNQSVVAQNPE
AELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLVAPVVVARGTLSITTTEIYFEVDEE
DPAFKNTDAKVLAYSEGLHGKWMFSEIRAVFSRRYLLQNTGLEVFMANRTSVMFNFPDQS
TVKRVVYSLPRVGVGTSYGLPQARRISLATPRQLFKSSNMTQRWQRREISNFEYLMFLNT
IAGRTYNDLNQYPIFPWVLTNYDSEELDLTLPGNFRDLSKPIGALNPKRAAFYAERYETW
DDDSTSPHHYTSLYSTAHSTLMWMLRIEPFSTFFLNANDDKFDHPDRAFSGIGHSWRNCQ
RDTADVKELIPEFYYLPELFVNSNEYELGMREDGVPVCDVELPAWAKKPEDFVRINRMAL
ESEFVSCQLHQWIDLIVGYKQRGPEAVRALNVFDFLSYEGSVTLDNLDAPQREVIEMQIQ
LCGQVPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANT
LPHLSIPAAVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIEMDPLIANNSGVNKR
QITDLVDQSIQINTHCFVVTADNRYILVCGFWDKSFRVYSTETGKLTQIVFGHWDVVTCL
ARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCV
SVCAELGLVISGAKEGPCLVHTITGDLLRALEGPELCQRPRLISVSSEGHCIINYERGRF
CNFSINGKLLAQMEVNDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAG
IRAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
9123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagaagccggcttcagcaccaccgggctccgcttcttcgctcacggacaca
gaccgagacccgcaccctccgccgggctcctccgcgccgcagccgcagcagcaggtcgcc
gcggcgggcgctagctccggcgccgtcacaggggaaaggatggtgtccgcagccggctcc
atggtcctccccgccggggtgatcaaccccgccgtcccgatcaggaatatccagatgaaa
ttcgccgtgctggtgggcctgatccaggtcggggaggttagcaacagggacatcgtggag
acggtgctgaacctgctggtgggcggcgagtttgacctggagatgaacttcatcatccag
gaggcggagagcatcggctgcatggtggagctgctgtcccactgcgaggtgacgtgccag
gctgagatctggagcatgttcacggccatcctccgcaagagcgtgcgcaacctgcagacc
agcacggaggtgggcctcatccagcaggtgctgctgaagatgagcacggtggacgacatg
atcgcagaccttctggtggacatgctgggagtcatggccagttacagcatcacagtcaag
gagctgaagctgctcttcagtatgctgaggggagacaatggcatctggccaagacacgcg
atcaagctcttgtcggtgttgaaccagatgcctcagagacacggtcctgataccttcttc
aacttcccaggacgcagtgcagcggctatagcattgccaccaattgccaaatggccttac
cagaacggattcaccatcaacacctggttcaggcaggatccactcaacaacatcaacgtg
gataaagacaaaccgtacctctattgttttcgcaccagtaaaggaatcggttactccgct
cactttgtgggaaactgtctcatcgtgacatcgttgaaatcgaagggaaaaggcttccag
cactgtgtgaaatacgatttccagccccgcaagtggtacatgatcagcatcgtccacatc
tacaaccgctggaggaactcggagattcgttgctacgttaacggtcaactggtctcctat
ggtgacatggcctggcacgtcaacaccaatgatagctacgacaagtgtttcctgggttca
tcggagacagcggacgctaacagggtgttttgtgggcagctgggagccatctacgttttc
agcgaggccctgaatccagctcagatctttgccattcaccagctcggcccgggatacaag
agcaccttcaagttcaagtccgagagcgacatccacctggccgagcaccacaagcaggtg
ctgtacgatggcaagctggccagctccatctccttcacctacaacgccaaggcgacggat
gcccagctgtgcctggagtcctcgccgagggaaaacgcctccatcttcgtccactcgcca
catgccctcatgctacaggacgtgaaggccattgttacccactccatccacagtgccatc
cactcgataggaggcatccaggtcctgtttcctctctttgctcagctggactacaagcag
ctcaacgactgcagtgtggacacgtcggtctgtgccactctgctggcgttcctggtggag
ctgttgaagagctccgtggccatgcaggagcagatgctgggagggaagggcttcctggtg
attggatacctgctggagaagtcatcccgagtccacatcaccagggccgtacttgaacag
ttcctgtccttcgccaagtatctggatggtttacctcatggagcgccactcctcaaacag
ctctgtgaccatgtcctgttcaacgctgccatctggatacacacccctgccaaggtccag
ctgtccctctacacctacctgtcatcggagttcatcggcaccgccaccatctacaccacc
atccgccgcgtcggcaccgtcctgcagctgatgcacactctgaagtactactactgggcc
atcaacccgctggagtgcagtggaatcagccccaaaggtctcgacggaccgcggccgtcc
caaaaggagatcatctcgctcagagccttcatgctcctcttcctcaaacagctgatactg
aaggaccggggcgtgaaggaggacgagctgcagagcattctgaactacctactgaccatg
catgaggatgagaacatccacgatgtgctccagctgctggtggctcttatgtctgagcac
ccggcgtccatgatccctgcattcgatcagaggaatggaataagggtgatctgcaaactc
ctggcctccaagagtgagagcatccgggtccaagccctcaaagtcctgggctatttcctc
aagcacctcggccacaagaggaaggtagagatcatgcacacgcacagtctgttcacgctg
ctgggggagaggctgatgatgcacactaacaccgtctctatcaccacctacaacacgctt
tatgagattctgaccgagcaggtctgcactcaggtggtccacaaaccccaccccgagccc
gactccaccgtcaagatccagaatcccatgattttgaaagtagtggcgaccctcctgaag
aactcctctcccagtgctgagctgatggaagtcaggagactctttctctccgacatgata
aagctcttcagcaacagccgcgaaaaccgtcgctgcctgctgcagtgctccgtgtggcag
gactggatgttctccctcggatacatcaaccccaagagccccgaggagcagaaaatcact
gagatggtgtacaacatattcagaatcctgctctaccacgccatcaaatacgaatggggc
gggtggagagtgtgggttgacaccctgtctatcgcacactccaaggtgacctacgaggcc
cataaggaatacttagctaagatgtacgaggagtaccagcgtcaggaggaggagaacatg
aagaaaggaaagaaaggctctgtgtccaccatctctgggctttctgctgcgcccgcccct
gtggtcaacggcaacctggagatcgacgataactctcagacacagacgccggagagcgag
gctgaatacagcgagggggccaacctcctcgctgaaggcgccgtgaagcgacccaatgga
gaggccctgacgcccggggagcagagcgctggtccaggcgtgagggtggaggtccacgac
ctgctggtggacattaaagcagagaaagtagaggccacagaggtgaagctggatgacctc
gacctgtctcccgaaggccttagtggaggtgtagttgtaggaggtgggggaggaatggag
aacgggcctctggtggaggtggactctctcctggacagtgcttactgcgctgtcgtgcag
aacatgaacgggaatctggcgcctaaagatgacacgccggcctcaggagttggattgggg
ccaagcctggggctctcgggggtcaacctggaggacgatgggaacatgggtccgctcatc
actttggctgatgagaaggacagtgtcccgagcaacaacggatttctcttcagcaaggtt
gatgaaaagctgcttccagctctggcagctacagaccccctcgtgctgcccagtccagac
cagcccacttcatccggcccagtaccgtccctctccaccaccagcgccagtgacgacctc
agcctgctcgcccacatgaccagctgcggctctgatctacagacagggagccacacagcc
ggggaacttccggaggacgggctcttcaagatccagagccctctcgctgacatcagctcc
attgctgaggccgagagccaaagccagatccagggggcctccagaccagatttcccagag
ggagaggtcacagccggggcagagggagaggctgcgggggtgaagactggtggagacacg
gccagcaccacctctgatacagagaggtcggatgacgggaaagacaaagacacaaagaag
atccaaaccactgcgactactcaggcccttcacggccgcaccgccgcgcagctggagcgg
gacctacgcgtcgacctgggcttcaggggaatgcccatgacggaggagcagcgccggcag
ttcagccccggcccacgcacgactatgttccgtatccctgaattcaagtggtcccccatg
caccagaggttgctcaccgacctgctgttcgccctggaaaccgacgtgcacgtgtggagg
agccactcaaccaagtcggtgatggatttcgtgaacagcaatgaaaacatcatcttcgtc
cacaacaccatccacctcatttctcagatggtggacaacatcatcatcgcctgtgggggc
atccttcctctcctgtccgccgccacctccccttccagttctaagaatagtgccaacgct
aaggcaggaggagccagaccccagggggggtcaaagggagaggaggtgacccctgttcct
gggggaggaggcacagggggagagacggagctggagaacatcgaggcgacgcagggcatg
tcctcggagacggcggtcaccttcctctcgcgtctcatggccatggtcgacgtgctggtg
ttcgccagctccctcaacttcagcgagatcgaggccgagaagaacatgtcgtcgggaggg
ctgatgaggcagtgtctccgcctggtttgctgtgtggcggtgaggaactgtctggagtgc
aggcagagacagagagaccgaagctgcaagtcgtccttaaccagcagcaagtcgcaggac
agcctccacagtgcctccaacaccaacaagcaggatccagacagactcctgcaggatgtc
gacatcaatcgtctccgagctgtagtattcagagacgtggatgacagtaagcaagctcag
ttcctggcgctggcagttgtctacttcatctcagtcctcatggtgtctaagtaccgggac
atcttggaaccccagcgggagatttgcagatccaccagcctatcagggagaagcatccgc
cacgagatcaactccccaaccagtacagagcacccatccacagccttctctgacaagcag
acccccacccctgtggatgactctccccgggccgggctcccccacacggactctggaatc
ggagaggagggtcacgtggccgggtccctgaacggctcggagatgggtctcggcctcggc
ctcggcctggtcgggagagagacagacagagatcgagacagagacatggggggaggagga
ggaggaggcccggatctgttgtgcagcctgtctgacgtcaggaggtcacaggagagcctt
ctggattctccccacaaccccggctccaaccccaactccagcaacgccccgccctcgtcc
atctccagcatcactcaaacaaacaaaggcatcaatgtcaaggagatcctgaagagtttg
gtggcagcgccagtcgatggaggggacttgggtcaggattcggggccgacgccctaccac
cccgaccccgccctgaagacacaccccatgctgcccatgcagttccactccttcgacagg
agtgttgtggttccagtcaaaaagccgccacccggcagcctgtcagtcaacaccgtgggc
acacccaccactggcggatcgaccaccgcgggcagcacccccaacatctttgctgccgcg
acagcaacacccaagagcatgatcaacactacaggtgccacagactccgcgtcctcttcc
tcctcctcctcttcgtcgttcgtcaacggtgccacgagtaagaatctgccagcggtgcag
acggtggcacccatgccagaagactcgatggagaacatgagtgcctattgtgaggtggcg
cagtgtgcgctgcgcagcggtcagacgccccctgagctcaagtcttttagctctctggca
ggcttccagactgccccccgagatgcaggacagtgttttagcatcaccaccaagctggag
cgcgccctggagaaggtggcgccgctgctgagggagatctttgtggactttgcccccttc
ctgtccaggacgctgctgggtagccatgggcaggaactgctcatagaaggtacaggcctg
gtgtgtatgaagtcaagcacgtctgtggtggagcttgtgatgctgctctgttctcaggaa
tggcaaaactccattcagaagaacgctggtctggccttcattgagctgatcaatgaggga
agactcctgtgtcacgccatgaaggatcatattgtgcgcgttgccaacgaggcggagttc
atcctgaacagacagagagcggaggacgttcacaagcacgctgagtttgagtctaactgt
gcccagtatgctgcggaccggagggaggaggagaaaatgtgcgaccacctcatcagcgcc
gctaagcacagagatcatgtgacggcaaaccagctgaagcagaagatcctcaacatcctg
accaataagcacggggcgtgggggacaatgtcccagagccaattacatgacttctggcgt
ctagactactgggaggacgacctgaggaggagacggagatttgtgcgaaatgcctttggc
tccacccacgccgacatgtcactcaaagccctggaggactatggtacagaagaggaagag
gaggggatgaagtcgaaaaagaatttgcgcaaccagtcagtagtcgcccagaacccagag
gcggagttaatgctggagggagacgatgacgccgtcagtctgctgcaggaaaaagagatt
gataaccttgcaggacccgtggttctgagcactcccgctcagctggtggctcctgtggtg
gtggctcgcggcactctgtccatcaccacgaccgagatctacttcgaggtggacgaagag
gatcctgcctttaagaacacggatgctaaagtcctggcctactcagagggtctgcacggc
aaatggatgttcagtgagatccgagctgtgttttccagacgatacctgctgcaaaacact
ggactagaggtcttcatggccaacagaacgtctgtgatgtttaacttccccgaccagtcc
acagtcaaacgggtggtttacagtctcccacgggtcggggtcggaacgagttacgggctc
ccccaggccaggcggatttccttagcaacccctcgtcagctcttcaagtcgtccaacatg
actcagcgctggcagaggagagagatctccaactttgagtacctcatgttcctcaacact
attgcagggagaacctacaatgatctgaaccagtatcccatcttcccctgggtcttgacc
aactatgattcagaagagctcgatctcactctacctggaaacttcagagacctctccaag
ccaatcggtgccctgaatcccaagcgggcagccttttacgccgagcgctacgagacgtgg
gacgacgacagcacgtctcctcaccactacacctccctgtactccaccgctcactcaaca
ctgatgtggatgctcagaatagagcccttcagcacgtttttcctcaacgccaacgacgac
aagttcgaccatccagatagagcgttctccggcatcggccattcgtggaggaactgccag
agggacacggctgacgtcaaggagctgatcccagagttctactatttgcccgagttgttt
gtcaacagcaatgagtacgagctggggatgcgtgaagacggcgtccccgtgtgtgacgtg
gagcttcccgcctgggccaagaaacctgaagactttgtccgcattaaccggatggcgctg
gagagcgagtttgtgtcgtgccagcttcaccagtggatcgatctaatagttggctacaag
cagcgggggccggaggcggtccgagccctcaacgtgttcgacttcctgtcctacgaggga
tcggtcaccctggacaatttagacgctccgcaacgcgaggttattgagatgcagattcag
ctctgtggtcaggtcccctcgcagctgctgatagagccacacccacctcgctcctccgcc
atgcacctgtgtttccttccccagagccctctgatgtttaaggatcagatgcagcaggac
gtcatcatggtgctcaagttcccctccaactcccccgtcacgcacgtcgccgccaacacg
ctcccccacctcagcataccggcggctgtcaccgtcacgtgtagccggctgttcgcagtc
aaccgctggcacaacacagttggccttcgaggagctccaggttactccctggaacaggct
catcatctccccatcgagatggaccctctcatagcaaacaactcaggcgtgaacaagcgg
cagatcactgacctggtcgaccagagcatccaaatcaacacacactgttttgtggttacc
gccgacaaccgctacatcctggtgtgcggcttctgggacaagagcttccgggtttactcc
actgaaacaggaaagctgacccagatcgtttttggccactgggatgtggtgacgtgtctg
gcgaggtcagagtcctacatcggaggagactgctacatcgtgtccggctccagagacgcc
actcttcttctgtggtactggagtggacgacaccacataataggcgacaaccccaataac
agtgactatcctgctcccagggcggtactgacgggacacgaccacgaggtggtgtgcgtc
tctgtctgtgcggagctggggttggtcatcagtggagctaaagagggcccgtgcctggtc
cacaccatcacaggggacctgctgagggccctggaggggccagagctgtgtcagcggccc
cgcctcatctcagtgtccagcgaaggccactgcatcatcaactacgagagaggccgcttc
tgcaacttcagcataaacggaaaactgctggcacaaatggaggtcaacgactccacacgg
gccatcctgttgagcagcgacggacagaacctggtcacaggaggtgataacggagttgtg
gaagtgtggcaggcgtgcgacttcaaacagctttacatctacccaggctgtgatgccggc
atccgcgccatggacctctcacatgaccagaggaccctaatcactggcatggcgtccggc
agcattgtggcgtttaacatagacttcaaccgctggcactacgaacaccagaacaggtac
tga
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integrated database retrieval system
