Hippoglossus stenolepis (Pacific halibut): 118122673
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Entry
118122673 CDS
T08308
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04080
Neuroactive ligand-receptor interaction
hsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118122673 (gabra1)
04082 Neuroactive ligand signaling
118122673 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsp04040
]
118122673 (gabra1)
Ion channels [BR:
hsp04040
]
Ligand-gated channels
GABA-A
118122673 (gabra1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
118122673
NCBI-ProteinID:
XP_035035432
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Position
15:complement(17094884..17124306)
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AA seq
461 aa
AA seq
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MGGRSRTAFLCLWACLLVANRVLSGKSSGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFTGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMDPQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacggagcaggacggcctttctgtgtctgtgggcttgcttgcttgtggccaac
agagtgctgagtgggaaaagctctgggcagaacggcatgacagatgaacagaaagataac
actacagtgttcaccaagatcttagacagccttctggatggctatgacaatcgcctcagg
ccaggactaggagagcgtgtaaccgaagtcaagactgacattttcgtgactagcattggg
ccagtttcggaccacgacatggagtacaccattgatgtcttcttcagacagagctggaag
gacgaaagattaaagttcacgggccccatggccgtgctgcgtctcaacaacctgatggcc
agcaagatctggacccccgataccttcttccacaatggcaagaagtccgtggcccacaac
atgaccatgccaaacaagctgctgcgaatcacagaggagggcacgctgctgtacaccatg
aggcttacagtcagggcagagtgtcccatgcacctggaggacttcccgatggatgcccat
gcttgtccactgaagtttggcagctacgcctacactcgagcagaggtggtgtacgtgtgg
accagaggagctgcccagtctgtggtggtggcagaggatgggtccaggttaaaccagtac
gatctgatgggacagagtgtggactctggtgtggtgcagtccagcacgggagaatacgtc
gtgatgacaacccacttccacctgaagaggaaaattggttactttgtgatccaaacatat
ctgccctgcatcatgactgtcatcctctcccaagtgtcgttctggctcaacagagagtcc
gtccctgccaggactgtctttggagtgaccactgtcctgaccatgaccacactcagtatc
agtgccaggaactctctccctaaagtggcctatgccacagctatggattggttcatcgct
gtctgctatgcattcgtcttctcggccctcatcgagtttgccacagtcaactacttcacc
aagaggggttacgcctgggatggaaaaagtgtggtaccagagaagcaaaagaagaagaag
gagtccctcctcaagaagaacaacaccacagcctacccagctgccactgctacagccttc
gcgcccaatattgccagggaccctggattggccactattgccaaaagcgcaccgccgccc
ccaaccgagcccaaggaggagccaaagcccaaacctccagaggccaagaaaacctttaac
agtgtgagcaagatagacaggattgccagaatagccttcccattgctctttggaaccttt
aacttggtctactgggcaacttacttgaataagaagcccaaactgcagggaatggatcca
caataa
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